Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 MIR4635-201ENST00000583759 79 ntBASIC2.61□□□□□ -1.99
NPHS1O60500 AC131055.1-201ENST00000584626 316 ntBASIC2.61□□□□□ -1.99
NPHS1O60500 AC022513.1-201ENST00000624512 117 ntBASIC2.61□□□□□ -1.99
NPHS1O60500 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
NPHS1O60500 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
NPHS1O60500 AL136360.1-201ENST00000503377 1900 ntBASIC2.6□□□□□ -1.99
NPHS1O60500 RNU6-235P-201ENST00000362644 107 ntBASIC2.6□□□□□ -1.99
NPHS1O60500 Y_RNA.120-201ENST00000363304 110 ntBASIC2.6□□□□□ -1.99
NPHS1O60500 Y_RNA.273-201ENST00000364703 102 ntBASIC2.6□□□□□ -1.99
NPHS1O60500 SNORA70.4-201ENST00000365509 134 ntBASIC2.6□□□□□ -1.99
NPHS1O60500 AL138827.1-201ENST00000402666 306 ntBASIC2.6□□□□□ -1.99
NPHS1O60500 EEF1A1P41-201ENST00000414667 207 ntBASIC2.6□□□□□ -1.99
NPHS1O60500 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.6□□□□□ -1.99
NPHS1O60500 AL606517.2-201ENST00000442855 241 ntBASIC2.6□□□□□ -1.99
NPHS1O60500 AL109933.2-201ENST00000452651 260 ntBASIC2.6□□□□□ -1.99
NPHS1O60500 RNU2-60P-201ENST00000517290 128 ntBASIC2.6□□□□□ -1.99
NPHS1O60500 AP002004.2-201ENST00000531656 154 ntBASIC2.6□□□□□ -1.99
NPHS1O60500 MIR4658-201ENST00000584344 65 ntBASIC2.6□□□□□ -1.99
NPHS1O60500 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.6□□□□□ -1.99
NPHS1O60500 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.6□□□□□ -1.99
NPHS1O60500 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
NPHS1O60500 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
NPHS1O60500 MIR208A-201ENST00000362287 71 ntBASIC2.59□□□□□ -1.99
NPHS1O60500 VTRNA1-1-201ENST00000363120 99 ntBASIC2.59□□□□□ -1.99
NPHS1O60500 DEFA7P-201ENST00000382676 285 ntBASIC2.59□□□□□ -1.99
NPHS1O60500 SNORA1-201ENST00000384107 130 ntBASIC2.59□□□□□ -1.99
NPHS1O60500 MIR522-201ENST00000385071 87 ntBASIC2.59□□□□□ -1.99
NPHS1O60500 RNA5SP210-201ENST00000391034 120 ntBASIC2.59□□□□□ -1.99
NPHS1O60500 RNA5SP21-201ENST00000410917 96 ntBASIC2.59□□□□□ -1.99
NPHS1O60500 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.59□□□□□ -1.99
NPHS1O60500 RNU7-94P-201ENST00000459576 63 ntBASIC2.59□□□□□ -1.99
NPHS1O60500 AC096725.1-201ENST00000514266 313 ntBASIC2.59□□□□□ -1.99
NPHS1O60500 SNORA18.4-201ENST00000516440 124 ntBASIC2.59□□□□□ -1.99
NPHS1O60500 RNU6-504P-201ENST00000516568 104 ntBASIC2.59□□□□□ -1.99
NPHS1O60500 RNU1-104P-201ENST00000517280 175 ntBASIC2.59□□□□□ -1.99
NPHS1O60500 MIR3129-201ENST00000581095 76 ntBASIC2.59□□□□□ -1.99
NPHS1O60500 MIR4325-201ENST00000583049 90 ntBASIC2.59□□□□□ -1.99
NPHS1O60500 MIR5092-201ENST00000583139 88 ntBASIC2.59□□□□□ -1.99
NPHS1O60500 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.59□□□□□ -1.99
NPHS1O60500 AC022217.4-201ENST00000604389 163 ntBASIC2.59□□□□□ -1.99
NPHS1O60500 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.59□□□□□ -1.99
NPHS1O60500 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.59□□□□□ -2
NPHS1O60500 RNU6-508P-201ENST00000363231 103 ntBASIC2.58□□□□□ -2
NPHS1O60500 SNORD61-201ENST00000384252 73 ntBASIC2.58□□□□□ -2
NPHS1O60500 RNU1-148P-201ENST00000384472 162 ntBASIC2.58□□□□□ -2
NPHS1O60500 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.58□□□□□ -2
NPHS1O60500 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.58□□□□□ -2
NPHS1O60500 Y_RNA.666-201ENST00000516187 112 ntBASIC2.58□□□□□ -2
NPHS1O60500 Y_RNA.692-201ENST00000516627 105 ntBASIC2.58□□□□□ -2
NPHS1O60500 RNU6-1270P-201ENST00000517128 108 ntBASIC2.58□□□□□ -2
NPHS1O60500 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.58□□□□□ -2
NPHS1O60500 Y_RNA.757-201ENST00000578934 114 ntBASIC2.58□□□□□ -2
NPHS1O60500 AL365205.2-201ENST00000594586 68 ntBASIC2.58□□□□□ -2
NPHS1O60500 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.58□□□□□ -2
NPHS1O60500 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.57□□□□□ -2
NPHS1O60500 MIR6073-201ENST00000352083 89 ntBASIC2.57□□□□□ -2
NPHS1O60500 Y_RNA.52-201ENST00000362760 96 ntBASIC2.57□□□□□ -2
NPHS1O60500 SNORD68-201ENST00000363214 84 ntBASIC2.57□□□□□ -2
NPHS1O60500 RNU1-91P-201ENST00000364746 163 ntBASIC2.57□□□□□ -2
NPHS1O60500 MIR624-201ENST00000385217 97 ntBASIC2.57□□□□□ -2
NPHS1O60500 RNA5SP127-201ENST00000411051 133 ntBASIC2.57□□□□□ -2
NPHS1O60500 AL158823.1-201ENST00000418441 478 ntBASIC2.57□□□□□ -2
NPHS1O60500 BX510359.4-201ENST00000423750 193 ntBASIC2.57□□□□□ -2
NPHS1O60500 FTH1P12-201ENST00000432137 551 ntBASIC2.57□□□□□ -2
NPHS1O60500 RPL23AP83-201ENST00000434984 473 ntBASIC2.57□□□□□ -2
NPHS1O60500 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.57□□□□□ -2
NPHS1O60500 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.57□□□□□ -2
NPHS1O60500 S100A11P2-201ENST00000467589 312 ntBASIC2.57□□□□□ -2
NPHS1O60500 RNA5SP341-201ENST00000516261 117 ntBASIC2.57□□□□□ -2
NPHS1O60500 AC090049.2-201ENST00000550377 109 ntBASIC2.57□□□□□ -2
NPHS1O60500 AC091544.4-201ENST00000555268 342 ntBASIC2.57□□□□□ -2
NPHS1O60500 MIR3121-201ENST00000579680 77 ntBASIC2.57□□□□□ -2
NPHS1O60500 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.57□□□□□ -2
NPHS1O60500 AC010297.1-201ENST00000623948 149 ntBASIC2.57□□□□□ -2
NPHS1O60500 CTSLP2-204ENST00000629029 392 ntBASIC2.57□□□□□ -2
NPHS1O60500 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.57□□□□□ -2
NPHS1O60500 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
NPHS1O60500 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
NPHS1O60500 RNU1-58P-201ENST00000362413 163 ntBASIC2.56□□□□□ -2
NPHS1O60500 RNU1-112P-201ENST00000364401 164 ntBASIC2.56□□□□□ -2
NPHS1O60500 RNU6-215P-201ENST00000365169 102 ntBASIC2.56□□□□□ -2
NPHS1O60500 MIR491-201ENST00000384877 84 ntBASIC2.56□□□□□ -2
NPHS1O60500 RNA5SP109-201ENST00000391010 116 ntBASIC2.56□□□□□ -2
NPHS1O60500 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.56□□□□□ -2
NPHS1O60500 RPS12P2-201ENST00000439728 269 ntBASIC2.56□□□□□ -2
NPHS1O60500 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.56□□□□□ -2
NPHS1O60500 Y_RNA.690-201ENST00000516603 95 ntBASIC2.56□□□□□ -2
NPHS1O60500 Y_RNA.714-201ENST00000517065 90 ntBASIC2.56□□□□□ -2
NPHS1O60500 MIR3126-201ENST00000577443 74 ntBASIC2.56□□□□□ -2
NPHS1O60500 AC087685.1-201ENST00000587507 141 ntBASIC2.56□□□□□ -2
NPHS1O60500 AL162274.2-201ENST00000614406 332 ntBASIC2.56□□□□□ -2
NPHS1O60500 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.56□□□□□ -2
NPHS1O60500 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.56□□□□□ -2
NPHS1O60500 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.56□□□□□ -2
NPHS1O60500 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.56□□□□□ -2
NPHS1O60500 RNU6-888P-201ENST00000363010 101 ntBASIC2.55□□□□□ -2
NPHS1O60500 RNU6-309P-201ENST00000364573 106 ntBASIC2.55□□□□□ -2
NPHS1O60500 Y_RNA.280-201ENST00000364765 112 ntBASIC2.55□□□□□ -2
NPHS1O60500 SNORD18B-201ENST00000365659 72 ntBASIC2.55□□□□□ -2
NPHS1O60500 Y_RNA.563-201ENST00000384707 108 ntBASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 225 ms