Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 Y_RNA.60-201ENST00000362831 98 ntBASIC1.3□□□□□ -2.2
HDAC3O15379 Y_RNA.117-201ENST00000363294 101 ntBASIC1.3□□□□□ -2.2
HDAC3O15379 RNU6-112P-201ENST00000363599 104 ntBASIC1.3□□□□□ -2.2
HDAC3O15379 RNU6-801P-201ENST00000364087 105 ntBASIC1.3□□□□□ -2.2
HDAC3O15379 RNU6-326P-201ENST00000365480 107 ntBASIC1.3□□□□□ -2.2
HDAC3O15379 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.3□□□□□ -2.2
HDAC3O15379 Y_RNA.447-201ENST00000384184 113 ntBASIC1.3□□□□□ -2.2
HDAC3O15379 RNU6-662P-201ENST00000384253 104 ntBASIC1.3□□□□□ -2.2
HDAC3O15379 Y_RNA.556-201ENST00000384677 113 ntBASIC1.3□□□□□ -2.2
HDAC3O15379 AL603910.2-201ENST00000407268 136 ntBASIC1.3□□□□□ -2.2
HDAC3O15379 RNU6-1186P-201ENST00000410429 97 ntBASIC1.3□□□□□ -2.2
HDAC3O15379 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.3□□□□□ -2.2
HDAC3O15379 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.3□□□□□ -2.2
HDAC3O15379 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.3□□□□□ -2.2
HDAC3O15379 AC015922.2-201ENST00000435593 184 ntBASIC1.3□□□□□ -2.2
HDAC3O15379 RPS27P1-201ENST00000450552 247 ntBASIC1.3□□□□□ -2.2
HDAC3O15379 RPS26P45-201ENST00000471748 340 ntBASIC1.3□□□□□ -2.2
HDAC3O15379 Y_RNA.673-201ENST00000516306 88 ntBASIC1.3□□□□□ -2.2
HDAC3O15379 RNU6-1337P-201ENST00000516525 95 ntBASIC1.3□□□□□ -2.2
HDAC3O15379 AC084364.2-201ENST00000546924 395 ntBASIC1.3□□□□□ -2.2
HDAC3O15379 AC004817.2-201ENST00000561794 651 ntBASIC1.3□□□□□ -2.2
HDAC3O15379 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.3□□□□□ -2.2
HDAC3O15379 MIR4303-201ENST00000581299 66 ntBASIC1.3□□□□□ -2.2
HDAC3O15379 MIR3128-201ENST00000581957 66 ntBASIC1.3□□□□□ -2.2
HDAC3O15379 MIR8074-201ENST00000615081 81 ntBASIC1.3□□□□□ -2.2
HDAC3O15379 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.3□□□□□ -2.2
HDAC3O15379 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.3□□□□□ -2.2
HDAC3O15379 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.29□□□□□ -2.2
HDAC3O15379 MIR335-201ENST00000362173 94 ntBASIC1.29□□□□□ -2.2
HDAC3O15379 Y_RNA.140-201ENST00000363474 103 ntBASIC1.29□□□□□ -2.2
HDAC3O15379 RNU6-740P-201ENST00000364734 105 ntBASIC1.29□□□□□ -2.2
HDAC3O15379 Y_RNA.277-201ENST00000364754 102 ntBASIC1.29□□□□□ -2.2
HDAC3O15379 Y_RNA.310-201ENST00000365063 113 ntBASIC1.29□□□□□ -2.2
HDAC3O15379 SNORA4.2-201ENST00000365313 147 ntBASIC1.29□□□□□ -2.2
HDAC3O15379 Y_RNA.539-201ENST00000384635 107 ntBASIC1.29□□□□□ -2.2
HDAC3O15379 RNU6-136P-201ENST00000384663 107 ntBASIC1.29□□□□□ -2.2
HDAC3O15379 RNA5SP109-201ENST00000391010 116 ntBASIC1.29□□□□□ -2.2
HDAC3O15379 EBAG9P1-201ENST00000418955 543 ntBASIC1.29□□□□□ -2.2
HDAC3O15379 MTND4LP30-201ENST00000454092 297 ntBASIC1.29□□□□□ -2.2
HDAC3O15379 AL163195.1-201ENST00000496941 348 ntBASIC1.29□□□□□ -2.2
HDAC3O15379 RNU6-237P-201ENST00000515985 71 ntBASIC1.29□□□□□ -2.2
HDAC3O15379 RNU6-1146P-201ENST00000516282 102 ntBASIC1.29□□□□□ -2.2
HDAC3O15379 SNORA31.17-201ENST00000516953 127 ntBASIC1.29□□□□□ -2.2
HDAC3O15379 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.29□□□□□ -2.2
HDAC3O15379 AL137100.2-201ENST00000555786 315 ntBASIC1.29□□□□□ -2.2
HDAC3O15379 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.29□□□□□ -2.2
HDAC3O15379 AC073413.2-201ENST00000604332 360 ntBASIC1.29□□□□□ -2.2
HDAC3O15379 AC022217.4-201ENST00000604389 163 ntBASIC1.29□□□□□ -2.2
HDAC3O15379 U2.14-201ENST00000615943 113 ntBASIC1.29□□□□□ -2.2
HDAC3O15379 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.29□□□□□ -2.2
HDAC3O15379 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.29□□□□□ -2.2
HDAC3O15379 SNORA25.1-201ENST00000362326 128 ntBASIC1.28□□□□□ -2.2
HDAC3O15379 Y_RNA.217-201ENST00000364214 105 ntBASIC1.28□□□□□ -2.2
HDAC3O15379 SNORA63D-201ENST00000364359 132 ntBASIC1.28□□□□□ -2.2
HDAC3O15379 Y_RNA.350-201ENST00000365409 98 ntBASIC1.28□□□□□ -2.2
HDAC3O15379 RNU6-439P-201ENST00000384188 106 ntBASIC1.28□□□□□ -2.2
HDAC3O15379 SNORA12.1-201ENST00000390873 148 ntBASIC1.28□□□□□ -2.2
HDAC3O15379 SNORA53-201ENST00000391141 249 ntBASIC1.28□□□□□ -2.2
HDAC3O15379 SNORA26.5-201ENST00000391215 123 ntBASIC1.28□□□□□ -2.2
HDAC3O15379 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.28□□□□□ -2.2
HDAC3O15379 RNU6-855P-201ENST00000410395 104 ntBASIC1.28□□□□□ -2.2
HDAC3O15379 RNA5SP511-201ENST00000410487 115 ntBASIC1.28□□□□□ -2.2
HDAC3O15379 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.28□□□□□ -2.2
HDAC3O15379 HSPE1P9-201ENST00000440046 311 ntBASIC1.28□□□□□ -2.2
HDAC3O15379 U8.19-201ENST00000459095 133 ntBASIC1.28□□□□□ -2.2
HDAC3O15379 Y_RNA.641-201ENST00000459414 105 ntBASIC1.28□□□□□ -2.2
HDAC3O15379 Y_RNA.637-201ENST00000459424 114 ntBASIC1.28□□□□□ -2.2
HDAC3O15379 RPL39P38-201ENST00000467018 153 ntBASIC1.28□□□□□ -2.2
HDAC3O15379 AL645939.4-201ENST00000604495 135 ntBASIC1.28□□□□□ -2.2
HDAC3O15379 AP000942.4-201ENST00000604811 241 ntBASIC1.28□□□□□ -2.2
HDAC3O15379 AC004832.4-201ENST00000608952 331 ntBASIC1.28□□□□□ -2.2
HDAC3O15379 AC006435.5-201ENST00000624486 112 ntBASIC1.28□□□□□ -2.2
HDAC3O15379 Y_RNA.44-201ENST00000362676 108 ntBASIC1.27□□□□□ -2.21
HDAC3O15379 Y_RNA.54-201ENST00000362766 105 ntBASIC1.27□□□□□ -2.21
HDAC3O15379 SNORD27-201ENST00000363981 72 ntBASIC1.27□□□□□ -2.21
HDAC3O15379 RNU6-1019P-201ENST00000364424 107 ntBASIC1.27□□□□□ -2.21
HDAC3O15379 Y_RNA.275-201ENST00000364726 110 ntBASIC1.27□□□□□ -2.21
HDAC3O15379 RNU6-763P-201ENST00000390865 106 ntBASIC1.27□□□□□ -2.21
HDAC3O15379 AC108667.1-201ENST00000428618 249 ntBASIC1.27□□□□□ -2.21
HDAC3O15379 RPS20P10-201ENST00000451209 253 ntBASIC1.27□□□□□ -2.21
HDAC3O15379 snoU13.9-201ENST00000458927 103 ntBASIC1.27□□□□□ -2.21
HDAC3O15379 RNA5SP445-201ENST00000515889 115 ntBASIC1.27□□□□□ -2.21
HDAC3O15379 RNU7-172P-201ENST00000517125 64 ntBASIC1.27□□□□□ -2.21
HDAC3O15379 MIR3684-201ENST00000579779 74 ntBASIC1.27□□□□□ -2.21
HDAC3O15379 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.27□□□□□ -2.21
HDAC3O15379 AL008718.3-201ENST00000610217 321 ntBASIC1.27□□□□□ -2.21
HDAC3O15379 AL359075.3-201ENST00000613288 217 ntBASIC1.27□□□□□ -2.21
HDAC3O15379 U6.104-201ENST00000637979 90 ntBASIC1.27□□□□□ -2.21
HDAC3O15379 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
HDAC3O15379 AC134026.1-201ENST00000623249 2239 ntBASIC1.27□□□□□ -2.21
HDAC3O15379 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.26□□□□□ -2.21
HDAC3O15379 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
HDAC3O15379 SNORD114-7-201ENST00000362520 77 ntBASIC1.26□□□□□ -2.21
HDAC3O15379 RNU6-1272P-201ENST00000362776 107 ntBASIC1.26□□□□□ -2.21
HDAC3O15379 Y_RNA.76-201ENST00000362931 109 ntBASIC1.26□□□□□ -2.21
HDAC3O15379 RNU6-271P-201ENST00000363858 105 ntBASIC1.26□□□□□ -2.21
HDAC3O15379 Y_RNA.341-201ENST00000365341 102 ntBASIC1.26□□□□□ -2.21
HDAC3O15379 Y_RNA.368-201ENST00000365547 113 ntBASIC1.26□□□□□ -2.21
HDAC3O15379 Y_RNA.416-201ENST00000384014 113 ntBASIC1.26□□□□□ -2.21
HDAC3O15379 RNU6-1289P-201ENST00000384431 106 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 234 ms