Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 Y_RNA.354-201ENST00000365448 111 ntBASIC1□□□□□ -2.25
TMX2-CTNND1H3BSU7 SNORA22B-201ENST00000383876 138 ntBASIC1□□□□□ -2.25
TMX2-CTNND1H3BSU7 Y_RNA.460-201ENST00000384255 102 ntBASIC1□□□□□ -2.25
TMX2-CTNND1H3BSU7 RNU6-937P-201ENST00000384325 106 ntBASIC1□□□□□ -2.25
TMX2-CTNND1H3BSU7 Y_RNA.551-201ENST00000384661 102 ntBASIC1□□□□□ -2.25
TMX2-CTNND1H3BSU7 RNU6-136P-201ENST00000384663 107 ntBASIC1□□□□□ -2.25
TMX2-CTNND1H3BSU7 RNU6-823P-201ENST00000391042 103 ntBASIC1□□□□□ -2.25
TMX2-CTNND1H3BSU7 COX6CP10-201ENST00000416832 224 ntBASIC1□□□□□ -2.25
TMX2-CTNND1H3BSU7 RNU7-94P-201ENST00000459576 63 ntBASIC1□□□□□ -2.25
TMX2-CTNND1H3BSU7 Y_RNA.631-201ENST00000459607 101 ntBASIC1□□□□□ -2.25
TMX2-CTNND1H3BSU7 AL049830.1-201ENST00000468034 425 ntBASIC1□□□□□ -2.25
TMX2-CTNND1H3BSU7 RNU6-155P-201ENST00000516347 100 ntBASIC1□□□□□ -2.25
TMX2-CTNND1H3BSU7 RNU6-1137P-201ENST00000517073 99 ntBASIC1□□□□□ -2.25
TMX2-CTNND1H3BSU7 RNU6-902P-201ENST00000517212 91 ntBASIC1□□□□□ -2.25
TMX2-CTNND1H3BSU7 AP001485.1-201ENST00000604799 199 ntBASIC1□□□□□ -2.25
TMX2-CTNND1H3BSU7 AC004832.4-201ENST00000608952 331 ntBASIC1□□□□□ -2.25
TMX2-CTNND1H3BSU7 AC090574.1-201ENST00000623186 233 ntBASIC1□□□□□ -2.25
TMX2-CTNND1H3BSU7 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1□□□□□ -2.25
TMX2-CTNND1H3BSU7 AC134503.1-201ENST00000633048 54 ntBASIC1□□□□□ -2.25
TMX2-CTNND1H3BSU7 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC1□□□□□ -2.25
TMX2-CTNND1H3BSU7 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
TMX2-CTNND1H3BSU7 RNU6-1123P-201ENST00000362347 106 ntBASIC0.99□□□□□ -2.25
TMX2-CTNND1H3BSU7 Y_RNA.143-201ENST00000363520 106 ntBASIC0.99□□□□□ -2.25
TMX2-CTNND1H3BSU7 Y_RNA.310-201ENST00000365063 113 ntBASIC0.99□□□□□ -2.25
TMX2-CTNND1H3BSU7 SNORD14.1-201ENST00000365609 90 ntBASIC0.99□□□□□ -2.25
TMX2-CTNND1H3BSU7 Y_RNA.445-201ENST00000384168 102 ntBASIC0.99□□□□□ -2.25
TMX2-CTNND1H3BSU7 RNU6-424P-201ENST00000384367 105 ntBASIC0.99□□□□□ -2.25
TMX2-CTNND1H3BSU7 RNU6-121P-201ENST00000410525 99 ntBASIC0.99□□□□□ -2.25
TMX2-CTNND1H3BSU7 RN7SKP200-201ENST00000410564 320 ntBASIC0.99□□□□□ -2.25
TMX2-CTNND1H3BSU7 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.99□□□□□ -2.25
TMX2-CTNND1H3BSU7 CALM2P4-201ENST00000430810 426 ntBASIC0.99□□□□□ -2.25
TMX2-CTNND1H3BSU7 RNU6-1046P-201ENST00000516538 107 ntBASIC0.99□□□□□ -2.25
TMX2-CTNND1H3BSU7 RNU6-1291P-201ENST00000516591 104 ntBASIC0.99□□□□□ -2.25
TMX2-CTNND1H3BSU7 AC211469.2-201ENST00000605461 205 ntBASIC0.99□□□□□ -2.25
TMX2-CTNND1H3BSU7 AL138825.1-201ENST00000618587 192 ntBASIC0.99□□□□□ -2.25
TMX2-CTNND1H3BSU7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.99□□□□□ -2.25
TMX2-CTNND1H3BSU7 Y_RNA.222-201ENST00000364264 102 ntBASIC0.98□□□□□ -2.25
TMX2-CTNND1H3BSU7 RNU4-41P-201ENST00000364426 143 ntBASIC0.98□□□□□ -2.25
TMX2-CTNND1H3BSU7 SNORA22-201ENST00000383907 134 ntBASIC0.98□□□□□ -2.25
TMX2-CTNND1H3BSU7 Y_RNA.471-201ENST00000384312 102 ntBASIC0.98□□□□□ -2.25
TMX2-CTNND1H3BSU7 SNORA22C-201ENST00000384614 134 ntBASIC0.98□□□□□ -2.25
TMX2-CTNND1H3BSU7 U8.16-201ENST00000391279 133 ntBASIC0.98□□□□□ -2.25
TMX2-CTNND1H3BSU7 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.98□□□□□ -2.25
TMX2-CTNND1H3BSU7 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.98□□□□□ -2.25
TMX2-CTNND1H3BSU7 PGBD4P5-201ENST00000445958 426 ntBASIC0.98□□□□□ -2.25
TMX2-CTNND1H3BSU7 RPS29P28-201ENST00000446439 141 ntBASIC0.98□□□□□ -2.25
TMX2-CTNND1H3BSU7 RNU7-34P-201ENST00000459394 64 ntBASIC0.98□□□□□ -2.25
TMX2-CTNND1H3BSU7 U8.20-201ENST00000459445 131 ntBASIC0.98□□□□□ -2.25
TMX2-CTNND1H3BSU7 RNA5SP168-201ENST00000516642 112 ntBASIC0.98□□□□□ -2.25
TMX2-CTNND1H3BSU7 Y_RNA.701-201ENST00000516812 110 ntBASIC0.98□□□□□ -2.25
TMX2-CTNND1H3BSU7 SUMO2P16-201ENST00000519475 264 ntBASIC0.98□□□□□ -2.25
TMX2-CTNND1H3BSU7 AL358944.1-201ENST00000528537 144 ntBASIC0.98□□□□□ -2.25
TMX2-CTNND1H3BSU7 MIR3171-201ENST00000584270 74 ntBASIC0.98□□□□□ -2.25
TMX2-CTNND1H3BSU7 RAC1P9-201ENST00000604990 392 ntBASIC0.98□□□□□ -2.25
TMX2-CTNND1H3BSU7 Y_RNA.772-201ENST00000606692 102 ntBASIC0.98□□□□□ -2.25
TMX2-CTNND1H3BSU7 AL365434.2-201ENST00000607979 234 ntBASIC0.98□□□□□ -2.25
TMX2-CTNND1H3BSU7 MIR6767-201ENST00000637302 66 ntBASIC0.98□□□□□ -2.25
TMX2-CTNND1H3BSU7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 RNU6-450P-201ENST00000364654 107 ntBASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 Y_RNA.267-201ENST00000364679 109 ntBASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 Y_RNA.439-201ENST00000384119 94 ntBASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 RNU6-950P-201ENST00000384651 107 ntBASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 RNU6-376P-201ENST00000384731 106 ntBASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 MIR532-201ENST00000385025 91 ntBASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 SNORD115-46-201ENST00000390982 71 ntBASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 MIR548P-201ENST00000408336 84 ntBASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 RNU4-30P-201ENST00000410245 143 ntBASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 MRPL35P3-201ENST00000421557 364 ntBASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 STAG3L5P-204ENST00000443759 179 ntBASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 RPS20P10-201ENST00000451209 253 ntBASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 AC005042.3-201ENST00000453230 174 ntBASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 HMGN1P10-201ENST00000474557 553 ntBASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 RNU6-1278P-201ENST00000516130 107 ntBASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 RNU6-1153P-201ENST00000516760 105 ntBASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 Y_RNA.715-201ENST00000517082 110 ntBASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 RNU6-1096P-201ENST00000517089 102 ntBASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 RPS29P30-201ENST00000600975 111 ntBASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 DEFB117-201ENST00000602356 141 ntBASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 SNORD114-21-201ENST00000606412 72 ntBASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 AC103810.9-201ENST00000606688 112 ntBASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 AC073349.3-201ENST00000617616 186 ntBASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 AL513423.1-201ENST00000621695 132 ntBASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 MIR8063-201ENST00000621930 81 ntBASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.97□□□□□ -2.25
TMX2-CTNND1H3BSU7 AC068700.1-201ENST00000565862 3754 ntBASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 Y_RNA.26-201ENST00000362539 101 ntBASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU4-50P-201ENST00000364361 141 ntBASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU6-1187P-201ENST00000364771 110 ntBASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 Y_RNA.368-201ENST00000365547 113 ntBASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 RNU6-102P-201ENST00000384485 104 ntBASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 MIR598-201ENST00000384868 97 ntBASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 MIR520G-201ENST00000385064 90 ntBASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 MIR660-201ENST00000385235 97 ntBASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 MIR653-201ENST00000385279 96 ntBASIC0.96□□□□□ -2.26
TMX2-CTNND1H3BSU7 AL590004.1-201ENST00000405321 300 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 263.2 ms