Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 SNORA40.18-201ENST00000391200 128 ntBASIC4.76□□□□□ -1.65
CCDC61Q9Y6R9 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.76□□□□□ -1.65
CCDC61Q9Y6R9 RN7SL504P-201ENST00000494496 287 ntBASIC4.76□□□□□ -1.65
CCDC61Q9Y6R9 AC025445.1-201ENST00000502728 300 ntBASIC4.76□□□□□ -1.65
CCDC61Q9Y6R9 RNU6-1258P-201ENST00000516911 111 ntBASIC4.76□□□□□ -1.65
CCDC61Q9Y6R9 MIR5680-201ENST00000577577 84 ntBASIC4.76□□□□□ -1.65
CCDC61Q9Y6R9 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 SNORD115-34-201ENST00000362441 82 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 SNORD115-12-201ENST00000362583 82 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 SNORD115-29-201ENST00000362834 82 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 SNORD115-9-201ENST00000362912 82 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 SNORD115-21-201ENST00000362963 81 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 SNORD115-14-201ENST00000363090 81 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 SNORD115-41-201ENST00000363608 82 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 RNU6-1244P-201ENST00000363614 108 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 SNORD115-11-201ENST00000363616 82 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 SNORD115-5-201ENST00000363633 82 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 SNORD115-39-201ENST00000363694 82 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 SNORD115-4-201ENST00000363810 82 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 SNORD115-6-201ENST00000363942 82 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 SNORD115-42-201ENST00000364273 82 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 SNORD115-15-201ENST00000364809 81 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 SNORD115-26-201ENST00000365067 82 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 SNORD115-10-201ENST00000365073 81 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 SNORD115-43-201ENST00000365503 82 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 SNORD115-36-201ENST00000365629 82 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 RNU6-1319P-201ENST00000390855 104 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 RNU6-747P-201ENST00000390928 104 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 RNA5SP323-201ENST00000391094 133 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 RNU6-241P-201ENST00000391148 104 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 RNU6-177P-201ENST00000411257 104 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 MIR1270-201ENST00000459320 83 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 AC090821.2-201ENST00000523552 176 ntBASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CCDC61Q9Y6R9 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC61Q9Y6R9 Z83843.1-201ENST00000604070 3685 ntBASIC4.74□□□□□ -1.65
CCDC61Q9Y6R9 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.74□□□□□ -1.65
CCDC61Q9Y6R9 NEAT1-202ENST00000501122 22743 ntBASIC4.74□□□□□ -1.65
CCDC61Q9Y6R9 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC61Q9Y6R9 RNU6-987P-201ENST00000384759 104 ntBASIC4.74□□□□□ -1.65
CCDC61Q9Y6R9 SNORA59A-201ENST00000459326 152 ntBASIC4.74□□□□□ -1.65
CCDC61Q9Y6R9 UBL5P1-201ENST00000507979 193 ntBASIC4.74□□□□□ -1.65
CCDC61Q9Y6R9 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC4.74□□□□□ -1.65
CCDC61Q9Y6R9 MIR5004-201ENST00000579078 107 ntBASIC4.74□□□□□ -1.65
CCDC61Q9Y6R9 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CCDC61Q9Y6R9 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.73□□□□□ -1.65
CCDC61Q9Y6R9 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC61Q9Y6R9 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC61Q9Y6R9 SNORA22.1-201ENST00000362701 134 ntBASIC4.73□□□□□ -1.65
CCDC61Q9Y6R9 RPS29P28-201ENST00000446439 141 ntBASIC4.73□□□□□ -1.65
CCDC61Q9Y6R9 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC61Q9Y6R9 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC61Q9Y6R9 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CCDC61Q9Y6R9 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.72□□□□□ -1.65
CCDC61Q9Y6R9 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC61Q9Y6R9 Y_RNA.57-201ENST00000362806 113 ntBASIC4.72□□□□□ -1.65
CCDC61Q9Y6R9 RNA5SP374-201ENST00000362939 125 ntBASIC4.72□□□□□ -1.65
CCDC61Q9Y6R9 Y_RNA.332-201ENST00000365271 113 ntBASIC4.72□□□□□ -1.65
CCDC61Q9Y6R9 RNU6-546P-201ENST00000383991 107 ntBASIC4.72□□□□□ -1.65
CCDC61Q9Y6R9 RNU6-380P-201ENST00000410207 107 ntBASIC4.72□□□□□ -1.65
CCDC61Q9Y6R9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC4.72□□□□□ -1.65
CCDC61Q9Y6R9 MIR4276-201ENST00000584832 70 ntBASIC4.72□□□□□ -1.65
CCDC61Q9Y6R9 SEPT14P17-201ENST00000617978 177 ntBASIC4.72□□□□□ -1.65
CCDC61Q9Y6R9 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC61Q9Y6R9 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CCDC61Q9Y6R9 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
CCDC61Q9Y6R9 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC4.71□□□□□ -1.66
CCDC61Q9Y6R9 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC61Q9Y6R9 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.71□□□□□ -1.66
CCDC61Q9Y6R9 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC61Q9Y6R9 Y_RNA.567-201ENST00000384736 106 ntBASIC4.71□□□□□ -1.66
CCDC61Q9Y6R9 RPS29P31-201ENST00000446147 164 ntBASIC4.71□□□□□ -1.66
CCDC61Q9Y6R9 UBL5P3-201ENST00000475112 231 ntBASIC4.71□□□□□ -1.66
CCDC61Q9Y6R9 RPS26P15-201ENST00000488067 348 ntBASIC4.71□□□□□ -1.66
CCDC61Q9Y6R9 MIR4325-201ENST00000583049 90 ntBASIC4.71□□□□□ -1.66
CCDC61Q9Y6R9 LINC00901.1-201ENST00000617252 152 ntBASIC4.71□□□□□ -1.66
CCDC61Q9Y6R9 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.71□□□□□ -1.66
CCDC61Q9Y6R9 U6.108-201ENST00000637764 58 ntBASIC4.71□□□□□ -1.66
CCDC61Q9Y6R9 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CCDC61Q9Y6R9 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC61Q9Y6R9 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CCDC61Q9Y6R9 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC61Q9Y6R9 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC61Q9Y6R9 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
CCDC61Q9Y6R9 RNA5SP502-201ENST00000362694 119 ntBASIC4.7□□□□□ -1.66
CCDC61Q9Y6R9 RNU6-411P-201ENST00000384451 107 ntBASIC4.7□□□□□ -1.66
CCDC61Q9Y6R9 RNU6ATAC41P-201ENST00000408600 126 ntBASIC4.7□□□□□ -1.66
CCDC61Q9Y6R9 RNU7-45P-201ENST00000459460 63 ntBASIC4.7□□□□□ -1.66
CCDC61Q9Y6R9 RNU7-2P-201ENST00000516096 62 ntBASIC4.7□□□□□ -1.66
CCDC61Q9Y6R9 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC4.7□□□□□ -1.66
CCDC61Q9Y6R9 Y_RNA.788-201ENST00000622394 112 ntBASIC4.7□□□□□ -1.66
CCDC61Q9Y6R9 CTSLP2-204ENST00000629029 392 ntBASIC4.7□□□□□ -1.66
CCDC61Q9Y6R9 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CCDC61Q9Y6R9 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CCDC61Q9Y6R9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
CCDC61Q9Y6R9 RNU4-32P-201ENST00000363404 141 ntBASIC4.69□□□□□ -1.66
CCDC61Q9Y6R9 RNU6-424P-201ENST00000384367 105 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 206 ms