Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.86□□□□□ -2.11
SMARCAL1Q9NZC9 SNORD116-28-201ENST00000516123 91 ntBASIC1.86□□□□□ -2.11
SMARCAL1Q9NZC9 RNU6-1146P-201ENST00000516282 102 ntBASIC1.86□□□□□ -2.11
SMARCAL1Q9NZC9 AC136628.3-201ENST00000521868 290 ntBASIC1.86□□□□□ -2.11
SMARCAL1Q9NZC9 MIR4299-201ENST00000577899 72 ntBASIC1.86□□□□□ -2.11
SMARCAL1Q9NZC9 AL008718.3-201ENST00000610217 321 ntBASIC1.86□□□□□ -2.11
SMARCAL1Q9NZC9 RNA5SP432-201ENST00000362480 116 ntBASIC1.85□□□□□ -2.11
SMARCAL1Q9NZC9 RNU6-1272P-201ENST00000362776 107 ntBASIC1.85□□□□□ -2.11
SMARCAL1Q9NZC9 RNU6-117P-201ENST00000365415 107 ntBASIC1.85□□□□□ -2.11
SMARCAL1Q9NZC9 EBAG9P1-201ENST00000418955 543 ntBASIC1.85□□□□□ -2.11
SMARCAL1Q9NZC9 HSPE1P13-201ENST00000451143 297 ntBASIC1.85□□□□□ -2.11
SMARCAL1Q9NZC9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.85□□□□□ -2.11
SMARCAL1Q9NZC9 AC097462.1-201ENST00000514125 324 ntBASIC1.85□□□□□ -2.11
SMARCAL1Q9NZC9 Y_RNA.679-201ENST00000516416 91 ntBASIC1.85□□□□□ -2.11
SMARCAL1Q9NZC9 RNU7-172P-201ENST00000517125 64 ntBASIC1.85□□□□□ -2.11
SMARCAL1Q9NZC9 AC004832.4-201ENST00000608952 331 ntBASIC1.85□□□□□ -2.11
SMARCAL1Q9NZC9 AC068700.1-201ENST00000565862 3754 ntBASIC1.84□□□□□ -2.11
SMARCAL1Q9NZC9 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
SMARCAL1Q9NZC9 RNU1-96P-201ENST00000364163 162 ntBASIC1.84□□□□□ -2.11
SMARCAL1Q9NZC9 RNU6-211P-201ENST00000384047 107 ntBASIC1.84□□□□□ -2.11
SMARCAL1Q9NZC9 Y_RNA.456-201ENST00000384232 111 ntBASIC1.84□□□□□ -2.11
SMARCAL1Q9NZC9 SNORD58.1-201ENST00000391313 66 ntBASIC1.84□□□□□ -2.11
SMARCAL1Q9NZC9 MTCO2P33-201ENST00000402100 465 ntBASIC1.84□□□□□ -2.11
SMARCAL1Q9NZC9 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.84□□□□□ -2.11
SMARCAL1Q9NZC9 HSPE1P21-201ENST00000438283 308 ntBASIC1.84□□□□□ -2.11
SMARCAL1Q9NZC9 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.84□□□□□ -2.11
SMARCAL1Q9NZC9 RNU7-128P-201ENST00000517247 62 ntBASIC1.84□□□□□ -2.11
SMARCAL1Q9NZC9 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
SMARCAL1Q9NZC9 AL353149.1-201ENST00000610667 244 ntBASIC1.84□□□□□ -2.11
SMARCAL1Q9NZC9 AC141273.2-201ENST00000618989 130 ntBASIC1.84□□□□□ -2.11
SMARCAL1Q9NZC9 AC068647.2-201ENST00000637380 353 ntBASIC1.84□□□□□ -2.11
SMARCAL1Q9NZC9 U6.108-201ENST00000637764 58 ntBASIC1.84□□□□□ -2.11
SMARCAL1Q9NZC9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
SMARCAL1Q9NZC9 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.83□□□□□ -2.12
SMARCAL1Q9NZC9 Y_RNA.82-201ENST00000363000 102 ntBASIC1.83□□□□□ -2.12
SMARCAL1Q9NZC9 Y_RNA.92-201ENST00000363043 102 ntBASIC1.83□□□□□ -2.12
SMARCAL1Q9NZC9 Y_RNA.235-201ENST00000364412 102 ntBASIC1.83□□□□□ -2.12
SMARCAL1Q9NZC9 Y_RNA.257-201ENST00000364596 102 ntBASIC1.83□□□□□ -2.12
SMARCAL1Q9NZC9 Y_RNA.306-201ENST00000365015 102 ntBASIC1.83□□□□□ -2.12
SMARCAL1Q9NZC9 Y_RNA.312-201ENST00000365089 102 ntBASIC1.83□□□□□ -2.12
SMARCAL1Q9NZC9 Y_RNA.322-201ENST00000365151 102 ntBASIC1.83□□□□□ -2.12
SMARCAL1Q9NZC9 SNORA72.4-201ENST00000384174 132 ntBASIC1.83□□□□□ -2.12
SMARCAL1Q9NZC9 Y_RNA.552-201ENST00000384665 112 ntBASIC1.83□□□□□ -2.12
SMARCAL1Q9NZC9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
SMARCAL1Q9NZC9 AC108059.2-201ENST00000434626 151 ntBASIC1.83□□□□□ -2.12
SMARCAL1Q9NZC9 RPL23AP6-201ENST00000446637 472 ntBASIC1.83□□□□□ -2.12
SMARCAL1Q9NZC9 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.83□□□□□ -2.12
SMARCAL1Q9NZC9 Y_RNA.650-201ENST00000459002 102 ntBASIC1.83□□□□□ -2.12
SMARCAL1Q9NZC9 RNU7-141P-201ENST00000459304 62 ntBASIC1.83□□□□□ -2.12
SMARCAL1Q9NZC9 Y_RNA.777-201ENST00000516982 102 ntBASIC1.83□□□□□ -2.12
SMARCAL1Q9NZC9 AC015720.1-201ENST00000565251 277 ntBASIC1.83□□□□□ -2.12
SMARCAL1Q9NZC9 MIR3122-201ENST00000577243 73 ntBASIC1.83□□□□□ -2.12
SMARCAL1Q9NZC9 MIR4282-201ENST00000583613 67 ntBASIC1.83□□□□□ -2.12
SMARCAL1Q9NZC9 Y_RNA.771-201ENST00000598668 102 ntBASIC1.83□□□□□ -2.12
SMARCAL1Q9NZC9 AC073413.2-201ENST00000604332 360 ntBASIC1.83□□□□□ -2.12
SMARCAL1Q9NZC9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.83□□□□□ -2.12
SMARCAL1Q9NZC9 Y_RNA.789-201ENST00000622480 102 ntBASIC1.83□□□□□ -2.12
SMARCAL1Q9NZC9 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
SMARCAL1Q9NZC9 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
SMARCAL1Q9NZC9 Y_RNA.292-201ENST00000364904 97 ntBASIC1.82□□□□□ -2.12
SMARCAL1Q9NZC9 U8.7-201ENST00000364940 136 ntBASIC1.82□□□□□ -2.12
SMARCAL1Q9NZC9 RNU6-376P-201ENST00000384731 106 ntBASIC1.82□□□□□ -2.12
SMARCAL1Q9NZC9 SNORA40.18-201ENST00000391200 128 ntBASIC1.82□□□□□ -2.12
SMARCAL1Q9NZC9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.82□□□□□ -2.12
SMARCAL1Q9NZC9 AC104332.1-201ENST00000440471 797 ntBASIC1.82□□□□□ -2.12
SMARCAL1Q9NZC9 SNORD2.1-201ENST00000458762 69 ntBASIC1.82□□□□□ -2.12
SMARCAL1Q9NZC9 AC117454.1-201ENST00000491120 168 ntBASIC1.82□□□□□ -2.12
SMARCAL1Q9NZC9 AL163195.1-201ENST00000496941 348 ntBASIC1.82□□□□□ -2.12
SMARCAL1Q9NZC9 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.82□□□□□ -2.12
SMARCAL1Q9NZC9 RNU6-1278P-201ENST00000516130 107 ntBASIC1.82□□□□□ -2.12
SMARCAL1Q9NZC9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.82□□□□□ -2.12
SMARCAL1Q9NZC9 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.82□□□□□ -2.12
SMARCAL1Q9NZC9 MIR4524B-201ENST00000581569 115 ntBASIC1.82□□□□□ -2.12
SMARCAL1Q9NZC9 AC005786.1-201ENST00000588553 154 ntBASIC1.82□□□□□ -2.12
SMARCAL1Q9NZC9 AC011921.3-201ENST00000605540 361 ntBASIC1.82□□□□□ -2.12
SMARCAL1Q9NZC9 AL359075.3-201ENST00000613288 217 ntBASIC1.82□□□□□ -2.12
SMARCAL1Q9NZC9 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.82□□□□□ -2.12
SMARCAL1Q9NZC9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.82□□□□□ -2.12
SMARCAL1Q9NZC9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.81□□□□□ -2.12
SMARCAL1Q9NZC9 SNORA8-201ENST00000384574 139 ntBASIC1.81□□□□□ -2.12
SMARCAL1Q9NZC9 MIR583-201ENST00000384846 75 ntBASIC1.81□□□□□ -2.12
SMARCAL1Q9NZC9 RNA5SP323-201ENST00000391094 133 ntBASIC1.81□□□□□ -2.12
SMARCAL1Q9NZC9 CST2P1-201ENST00000425770 87 ntBASIC1.81□□□□□ -2.12
SMARCAL1Q9NZC9 AL162725.1-201ENST00000435405 301 ntBASIC1.81□□□□□ -2.12
SMARCAL1Q9NZC9 Y_RNA.638-201ENST00000459374 113 ntBASIC1.81□□□□□ -2.12
SMARCAL1Q9NZC9 snoU13.15-201ENST00000459407 104 ntBASIC1.81□□□□□ -2.12
SMARCAL1Q9NZC9 RNU6-237P-201ENST00000515985 71 ntBASIC1.81□□□□□ -2.12
SMARCAL1Q9NZC9 RNA5SP182-201ENST00000516064 82 ntBASIC1.81□□□□□ -2.12
SMARCAL1Q9NZC9 RNU4-71P-201ENST00000516258 113 ntBASIC1.81□□□□□ -2.12
SMARCAL1Q9NZC9 RNU7-99P-201ENST00000516271 62 ntBASIC1.81□□□□□ -2.12
SMARCAL1Q9NZC9 RNVU1-2-201ENST00000516326 135 ntBASIC1.81□□□□□ -2.12
SMARCAL1Q9NZC9 RNU1-142P-201ENST00000516682 145 ntBASIC1.81□□□□□ -2.12
SMARCAL1Q9NZC9 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.81□□□□□ -2.12
SMARCAL1Q9NZC9 AC130289.1-201ENST00000577321 73 ntBASIC1.81□□□□□ -2.12
SMARCAL1Q9NZC9 MIR5094-201ENST00000578766 85 ntBASIC1.81□□□□□ -2.12
SMARCAL1Q9NZC9 MIR3618-201ENST00000580330 88 ntBASIC1.81□□□□□ -2.12
SMARCAL1Q9NZC9 AC009779.6-201ENST00000603972 165 ntBASIC1.81□□□□□ -2.12
SMARCAL1Q9NZC9 AC005972.2-201ENST00000604690 348 ntBASIC1.81□□□□□ -2.12
SMARCAL1Q9NZC9 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.81□□□□□ -2.12
SMARCAL1Q9NZC9 AL442067.1-201ENST00000613261 223 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 173.3 ms