Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 Y_RNA.527-201ENST00000384573 102 ntBASIC1.42□□□□□ -2.18
Q9N2K0 RNU6-1105P-201ENST00000384774 107 ntBASIC1.42□□□□□ -2.18
Q9N2K0 MIR660-201ENST00000385235 97 ntBASIC1.42□□□□□ -2.18
Q9N2K0 RPS4XP11-201ENST00000446897 772 ntBASIC1.42□□□□□ -2.18
Q9N2K0 OR9P1P-201ENST00000496431 281 ntBASIC1.42□□□□□ -2.18
Q9N2K0 RNA5SP445-201ENST00000515889 115 ntBASIC1.42□□□□□ -2.18
Q9N2K0 RNU6-764P-201ENST00000516396 105 ntBASIC1.42□□□□□ -2.18
Q9N2K0 AC131281.1-201ENST00000522984 164 ntBASIC1.42□□□□□ -2.18
Q9N2K0 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.42□□□□□ -2.18
Q9N2K0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
Q9N2K0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Q9N2K0 MIR126-201ENST00000362291 85 ntBASIC1.41□□□□□ -2.18
Q9N2K0 Y_RNA.310-201ENST00000365063 113 ntBASIC1.41□□□□□ -2.18
Q9N2K0 SNORA72-201ENST00000384339 132 ntBASIC1.41□□□□□ -2.18
Q9N2K0 RNU6-424P-201ENST00000384367 105 ntBASIC1.41□□□□□ -2.18
Q9N2K0 RNU6-997P-201ENST00000384725 107 ntBASIC1.41□□□□□ -2.18
Q9N2K0 SNORA12.1-201ENST00000390873 148 ntBASIC1.41□□□□□ -2.18
Q9N2K0 Y_RNA.581-201ENST00000391017 97 ntBASIC1.41□□□□□ -2.18
Q9N2K0 RNU6-985P-201ENST00000410182 104 ntBASIC1.41□□□□□ -2.18
Q9N2K0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.41□□□□□ -2.18
Q9N2K0 AC027119.1-201ENST00000440877 241 ntBASIC1.41□□□□□ -2.18
Q9N2K0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.41□□□□□ -2.18
Q9N2K0 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.41□□□□□ -2.18
Q9N2K0 AC011604.1-201ENST00000545978 196 ntBASIC1.41□□□□□ -2.18
Q9N2K0 SNORD3E-202ENST00000627253 216 ntBASIC1.41□□□□□ -2.18
Q9N2K0 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Q9N2K0 Y_RNA.136-201ENST00000363444 102 ntBASIC1.4□□□□□ -2.19
Q9N2K0 RNU6-770P-201ENST00000363929 105 ntBASIC1.4□□□□□ -2.19
Q9N2K0 RNA5SP259-201ENST00000365541 109 ntBASIC1.4□□□□□ -2.19
Q9N2K0 Y_RNA.621-201ENST00000411065 96 ntBASIC1.4□□□□□ -2.19
Q9N2K0 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.4□□□□□ -2.19
Q9N2K0 RNU6-496P-201ENST00000516145 99 ntBASIC1.4□□□□□ -2.19
Q9N2K0 RNU6-1153P-201ENST00000516760 105 ntBASIC1.4□□□□□ -2.19
Q9N2K0 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.4□□□□□ -2.19
Q9N2K0 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.4□□□□□ -2.19
Q9N2K0 AC015712.3-201ENST00000559380 164 ntBASIC1.4□□□□□ -2.19
Q9N2K0 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.4□□□□□ -2.19
Q9N2K0 SNORA63-201ENST00000363450 132 ntBASIC1.39□□□□□ -2.19
Q9N2K0 Y_RNA.172-201ENST00000363765 102 ntBASIC1.39□□□□□ -2.19
Q9N2K0 RNA5SP99-201ENST00000364020 114 ntBASIC1.39□□□□□ -2.19
Q9N2K0 Y_RNA.210-201ENST00000364161 110 ntBASIC1.39□□□□□ -2.19
Q9N2K0 SNORA40.18-201ENST00000391200 128 ntBASIC1.39□□□□□ -2.19
Q9N2K0 SNX2P2-201ENST00000424553 323 ntBASIC1.39□□□□□ -2.19
Q9N2K0 RNA5SP168-201ENST00000516642 112 ntBASIC1.39□□□□□ -2.19
Q9N2K0 RNU6-902P-201ENST00000517212 91 ntBASIC1.39□□□□□ -2.19
Q9N2K0 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.39□□□□□ -2.19
Q9N2K0 MIR3937-201ENST00000580135 106 ntBASIC1.39□□□□□ -2.19
Q9N2K0 AC006504.6-201ENST00000590142 199 ntBASIC1.39□□□□□ -2.19
Q9N2K0 AC037487.3-201ENST00000606668 112 ntBASIC1.39□□□□□ -2.19
Q9N2K0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Q9N2K0 AC084768.2-201ENST00000622736 221 ntBASIC1.39□□□□□ -2.19
Q9N2K0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.39□□□□□ -2.19
Q9N2K0 Y_RNA.214-201ENST00000364201 112 ntBASIC1.38□□□□□ -2.19
Q9N2K0 RNU4-41P-201ENST00000364426 143 ntBASIC1.38□□□□□ -2.19
Q9N2K0 Y_RNA.286-201ENST00000364813 102 ntBASIC1.38□□□□□ -2.19
Q9N2K0 RNU6-290P-201ENST00000365212 101 ntBASIC1.38□□□□□ -2.19
Q9N2K0 RNU6-1011P-201ENST00000384668 107 ntBASIC1.38□□□□□ -2.19
Q9N2K0 Y_RNA.569-201ENST00000384749 103 ntBASIC1.38□□□□□ -2.19
Q9N2K0 MIR583-201ENST00000384846 75 ntBASIC1.38□□□□□ -2.19
Q9N2K0 Y_RNA.602-201ENST00000410535 92 ntBASIC1.38□□□□□ -2.19
Q9N2K0 HSPE1P25-201ENST00000455484 251 ntBASIC1.38□□□□□ -2.19
Q9N2K0 RNY3P15-201ENST00000516297 97 ntBASIC1.38□□□□□ -2.19
Q9N2K0 Y_RNA.714-201ENST00000517065 90 ntBASIC1.38□□□□□ -2.19
Q9N2K0 SUMO2P16-201ENST00000519475 264 ntBASIC1.38□□□□□ -2.19
Q9N2K0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
Q9N2K0 AL121890.5-201ENST00000620848 304 ntBASIC1.38□□□□□ -2.19
Q9N2K0 AC068647.2-201ENST00000637380 353 ntBASIC1.38□□□□□ -2.19
Q9N2K0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Q9N2K0 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.37□□□□□ -2.19
Q9N2K0 Y_RNA.19-201ENST00000362462 99 ntBASIC1.37□□□□□ -2.19
Q9N2K0 U8.5-201ENST00000364528 136 ntBASIC1.37□□□□□ -2.19
Q9N2K0 RNU6-1080P-201ENST00000383982 107 ntBASIC1.37□□□□□ -2.19
Q9N2K0 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.37□□□□□ -2.19
Q9N2K0 SNORA53-201ENST00000391141 249 ntBASIC1.37□□□□□ -2.19
Q9N2K0 AL590004.1-201ENST00000405321 300 ntBASIC1.37□□□□□ -2.19
Q9N2K0 CALM2P4-201ENST00000430810 426 ntBASIC1.37□□□□□ -2.19
Q9N2K0 Z98949.2-201ENST00000440996 144 ntBASIC1.37□□□□□ -2.19
Q9N2K0 AL731563.1-201ENST00000442202 214 ntBASIC1.37□□□□□ -2.19
Q9N2K0 LINC01399-202ENST00000458450 244 ntBASIC1.37□□□□□ -2.19
Q9N2K0 RPL39P38-201ENST00000467018 153 ntBASIC1.37□□□□□ -2.19
Q9N2K0 AC010655.3-201ENST00000478818 450 ntBASIC1.37□□□□□ -2.19
Q9N2K0 CYCTP-201ENST00000504253 315 ntBASIC1.37□□□□□ -2.19
Q9N2K0 MRPS35P2-201ENST00000508242 191 ntBASIC1.37□□□□□ -2.19
Q9N2K0 RNU6-548P-201ENST00000517083 115 ntBASIC1.37□□□□□ -2.19
Q9N2K0 AC136628.3-201ENST00000521868 290 ntBASIC1.37□□□□□ -2.19
Q9N2K0 AP003072.1-201ENST00000531740 145 ntBASIC1.37□□□□□ -2.19
Q9N2K0 MIR3145-201ENST00000580727 82 ntBASIC1.37□□□□□ -2.19
Q9N2K0 MIR4762-201ENST00000585261 75 ntBASIC1.37□□□□□ -2.19
Q9N2K0 POLR3GP1-201ENST00000594073 261 ntBASIC1.37□□□□□ -2.19
Q9N2K0 AC027279.3-201ENST00000625055 122 ntBASIC1.37□□□□□ -2.19
Q9N2K0 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
Q9N2K0 RNU6-199P-201ENST00000362954 107 ntBASIC1.36□□□□□ -2.19
Q9N2K0 RNU4-80P-201ENST00000363200 141 ntBASIC1.36□□□□□ -2.19
Q9N2K0 Y_RNA.153-201ENST00000363615 91 ntBASIC1.36□□□□□ -2.19
Q9N2K0 U8.16-201ENST00000391279 133 ntBASIC1.36□□□□□ -2.19
Q9N2K0 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.36□□□□□ -2.19
Q9N2K0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.36□□□□□ -2.19
Q9N2K0 RN7SKP101-201ENST00000411376 320 ntBASIC1.36□□□□□ -2.19
Q9N2K0 ELOCP20-201ENST00000422460 345 ntBASIC1.36□□□□□ -2.19
Q9N2K0 RPL30P7-201ENST00000479312 323 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 216.6 ms