Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AL512605.2-201ENST00000592972 256 ntBASIC0.46□□□□□ -2.34
LRRC40Q9H9A6 AC103591.3-201ENST00000608684 209 ntBASIC0.46□□□□□ -2.34
LRRC40Q9H9A6 Y_RNA.9-201ENST00000362354 101 ntBASIC0.45□□□□□ -2.34
LRRC40Q9H9A6 Y_RNA.41-201ENST00000362646 102 ntBASIC0.45□□□□□ -2.34
LRRC40Q9H9A6 Y_RNA.157-201ENST00000363638 102 ntBASIC0.45□□□□□ -2.34
LRRC40Q9H9A6 MIR499A-201ENST00000384903 122 ntBASIC0.45□□□□□ -2.34
LRRC40Q9H9A6 MIR181A1-201ENST00000385026 110 ntBASIC0.45□□□□□ -2.34
LRRC40Q9H9A6 MIR522-201ENST00000385071 87 ntBASIC0.45□□□□□ -2.34
LRRC40Q9H9A6 SNORD105-201ENST00000386910 85 ntBASIC0.45□□□□□ -2.34
LRRC40Q9H9A6 SNORD12B-201ENST00000410433 91 ntBASIC0.45□□□□□ -2.34
LRRC40Q9H9A6 AC114737.2-201ENST00000421583 173 ntBASIC0.45□□□□□ -2.34
LRRC40Q9H9A6 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC0.45□□□□□ -2.34
LRRC40Q9H9A6 SNORD123-201ENST00000459473 70 ntBASIC0.45□□□□□ -2.34
LRRC40Q9H9A6 MIR4300-201ENST00000581016 96 ntBASIC0.45□□□□□ -2.34
LRRC40Q9H9A6 AC004467.1-201ENST00000615678 330 ntBASIC0.45□□□□□ -2.34
LRRC40Q9H9A6 RNY4P14-201ENST00000363656 96 ntBASIC0.44□□□□□ -2.34
LRRC40Q9H9A6 SNORD115-30-201ENST00000364117 82 ntBASIC0.44□□□□□ -2.34
LRRC40Q9H9A6 Y_RNA.361-201ENST00000365515 120 ntBASIC0.44□□□□□ -2.34
LRRC40Q9H9A6 RNU6-1304P-201ENST00000411374 106 ntBASIC0.44□□□□□ -2.34
LRRC40Q9H9A6 MTND5P5-201ENST00000503764 376 ntBASIC0.44□□□□□ -2.34
LRRC40Q9H9A6 Y_RNA.682-201ENST00000516457 100 ntBASIC0.44□□□□□ -2.34
LRRC40Q9H9A6 RNU2-12P-201ENST00000517216 168 ntBASIC0.44□□□□□ -2.34
LRRC40Q9H9A6 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.44□□□□□ -2.34
LRRC40Q9H9A6 Y_RNA.253-201ENST00000364562 112 ntBASIC0.43□□□□□ -2.34
LRRC40Q9H9A6 snoU2-30.1-201ENST00000365012 70 ntBASIC0.43□□□□□ -2.34
LRRC40Q9H9A6 Y_RNA.594-201ENST00000410373 140 ntBASIC0.43□□□□□ -2.34
LRRC40Q9H9A6 RNA5SP118-201ENST00000410385 109 ntBASIC0.43□□□□□ -2.34
LRRC40Q9H9A6 RNU6-408P-201ENST00000515910 100 ntBASIC0.43□□□□□ -2.34
LRRC40Q9H9A6 SNORA25.10-201ENST00000515926 124 ntBASIC0.43□□□□□ -2.34
LRRC40Q9H9A6 RNU6-229P-201ENST00000516614 102 ntBASIC0.43□□□□□ -2.34
LRRC40Q9H9A6 RNU6-1016P-201ENST00000516689 94 ntBASIC0.43□□□□□ -2.34
LRRC40Q9H9A6 AC022616.4-201ENST00000522985 181 ntBASIC0.43□□□□□ -2.34
LRRC40Q9H9A6 AC015540.1-201ENST00000615828 501 ntBASIC0.43□□□□□ -2.34
LRRC40Q9H9A6 MIR1-1-201ENST00000362147 71 ntBASIC0.42□□□□□ -2.34
LRRC40Q9H9A6 Y_RNA.89-201ENST00000363031 102 ntBASIC0.42□□□□□ -2.34
LRRC40Q9H9A6 RNU6-654P-201ENST00000364373 107 ntBASIC0.42□□□□□ -2.34
LRRC40Q9H9A6 SNORA2B-201ENST00000384583 137 ntBASIC0.42□□□□□ -2.34
LRRC40Q9H9A6 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.42□□□□□ -2.34
LRRC40Q9H9A6 MIR1827-201ENST00000408549 66 ntBASIC0.42□□□□□ -2.34
LRRC40Q9H9A6 RNU6-1050P-201ENST00000410388 107 ntBASIC0.42□□□□□ -2.34
LRRC40Q9H9A6 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.42□□□□□ -2.34
LRRC40Q9H9A6 AC098934.3-201ENST00000430450 190 ntBASIC0.42□□□□□ -2.34
LRRC40Q9H9A6 RNU4-49P-201ENST00000516080 140 ntBASIC0.42□□□□□ -2.34
LRRC40Q9H9A6 AC006380.1-201ENST00000603598 186 ntBASIC0.42□□□□□ -2.34
LRRC40Q9H9A6 MIR6516-201ENST00000630554 81 ntBASIC0.42□□□□□ -2.34
LRRC40Q9H9A6 AC134026.1-201ENST00000623249 2239 ntBASIC0.42□□□□□ -2.34
LRRC40Q9H9A6 Y_RNA.573-201ENST00000384763 105 ntBASIC0.41□□□□□ -2.34
LRRC40Q9H9A6 MRPS18CP6-201ENST00000423587 223 ntBASIC0.41□□□□□ -2.34
LRRC40Q9H9A6 AC005534.2-201ENST00000431047 433 ntBASIC0.41□□□□□ -2.34
LRRC40Q9H9A6 MTND1P4-201ENST00000435196 415 ntBASIC0.41□□□□□ -2.34
LRRC40Q9H9A6 HMGN2P32-201ENST00000444648 269 ntBASIC0.41□□□□□ -2.34
LRRC40Q9H9A6 AL392103.1-201ENST00000447000 198 ntBASIC0.41□□□□□ -2.34
LRRC40Q9H9A6 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC0.41□□□□□ -2.34
LRRC40Q9H9A6 Y_RNA.670-201ENST00000516255 105 ntBASIC0.41□□□□□ -2.34
LRRC40Q9H9A6 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.41□□□□□ -2.34
LRRC40Q9H9A6 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.41□□□□□ -2.34
LRRC40Q9H9A6 AC024909.2-201ENST00000553035 286 ntBASIC0.41□□□□□ -2.34
LRRC40Q9H9A6 MIR4251-201ENST00000635819 61 ntBASIC0.41□□□□□ -2.34
LRRC40Q9H9A6 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC0.41□□□□□ -2.34
LRRC40Q9H9A6 RNU6-1301P-201ENST00000362724 104 ntBASIC0.4□□□□□ -2.35
LRRC40Q9H9A6 Y_RNA.194-201ENST00000363985 102 ntBASIC0.4□□□□□ -2.35
LRRC40Q9H9A6 RNU6-131P-201ENST00000391144 107 ntBASIC0.4□□□□□ -2.35
LRRC40Q9H9A6 AL031003.1-201ENST00000404229 172 ntBASIC0.4□□□□□ -2.35
LRRC40Q9H9A6 MIR1302-7-201ENST00000408841 72 ntBASIC0.4□□□□□ -2.35
LRRC40Q9H9A6 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.4□□□□□ -2.35
LRRC40Q9H9A6 MTND2P22-201ENST00000444325 1033 ntBASIC0.4□□□□□ -2.35
LRRC40Q9H9A6 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.4□□□□□ -2.35
LRRC40Q9H9A6 RN7SKP12-201ENST00000516275 143 ntBASIC0.4□□□□□ -2.35
LRRC40Q9H9A6 RNU6-1223P-201ENST00000517124 104 ntBASIC0.4□□□□□ -2.35
LRRC40Q9H9A6 Y_RNA.224-201ENST00000364308 111 ntBASIC0.39□□□□□ -2.35
LRRC40Q9H9A6 RNU6-593P-201ENST00000364716 112 ntBASIC0.39□□□□□ -2.35
LRRC40Q9H9A6 Y_RNA.295-201ENST00000364918 102 ntBASIC0.39□□□□□ -2.35
LRRC40Q9H9A6 SNORD50B-201ENST00000364995 70 ntBASIC0.39□□□□□ -2.35
LRRC40Q9H9A6 SNORD116-2-201ENST00000384274 95 ntBASIC0.39□□□□□ -2.35
LRRC40Q9H9A6 SNORD116-6-201ENST00000384711 96 ntBASIC0.39□□□□□ -2.35
LRRC40Q9H9A6 Y_RNA.708-201ENST00000516950 96 ntBASIC0.39□□□□□ -2.35
LRRC40Q9H9A6 Y_RNA.714-201ENST00000517065 90 ntBASIC0.39□□□□□ -2.35
LRRC40Q9H9A6 MIR2355-201ENST00000517199 87 ntBASIC0.39□□□□□ -2.35
LRRC40Q9H9A6 AC104695.3-201ENST00000604052 296 ntBASIC0.39□□□□□ -2.35
LRRC40Q9H9A6 AL355073.2-201ENST00000612106 557 ntBASIC0.39□□□□□ -2.35
LRRC40Q9H9A6 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.39□□□□□ -2.35
LRRC40Q9H9A6 AC008133.2-201ENST00000624540 351 ntBASIC0.39□□□□□ -2.35
LRRC40Q9H9A6 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.39□□□□□ -2.35
LRRC40Q9H9A6 RNY1P8-201ENST00000383970 114 ntBASIC0.38□□□□□ -2.35
LRRC40Q9H9A6 RNA5SP95-201ENST00000410319 137 ntBASIC0.38□□□□□ -2.35
LRRC40Q9H9A6 MTCO2P12-201ENST00000427426 682 ntBASIC0.38□□□□□ -2.35
LRRC40Q9H9A6 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.38□□□□□ -2.35
LRRC40Q9H9A6 U8.19-201ENST00000459095 133 ntBASIC0.38□□□□□ -2.35
LRRC40Q9H9A6 AC105313.1-201ENST00000509121 353 ntBASIC0.38□□□□□ -2.35
LRRC40Q9H9A6 RNU4-57P-201ENST00000515980 135 ntBASIC0.38□□□□□ -2.35
LRRC40Q9H9A6 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.38□□□□□ -2.35
LRRC40Q9H9A6 AC012433.1-201ENST00000588916 398 ntBASIC0.38□□□□□ -2.35
LRRC40Q9H9A6 MIR6513-201ENST00000621188 64 ntBASIC0.38□□□□□ -2.35
LRRC40Q9H9A6 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
LRRC40Q9H9A6 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
LRRC40Q9H9A6 Y_RNA.172-201ENST00000363765 102 ntBASIC0.37□□□□□ -2.35
LRRC40Q9H9A6 RNU6-961P-201ENST00000363893 105 ntBASIC0.37□□□□□ -2.35
LRRC40Q9H9A6 RNU1-133P-201ENST00000364867 167 ntBASIC0.37□□□□□ -2.35
LRRC40Q9H9A6 Y_RNA.450-201ENST00000384198 113 ntBASIC0.37□□□□□ -2.35
LRRC40Q9H9A6 Y_RNA.554-201ENST00000384672 102 ntBASIC0.37□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 180 ms