Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 RNU6-1084P-201ENST00000362498 107 ntBASIC0.42□□□□□ -2.34
SHANK3Q9BYB0 Y_RNA.157-201ENST00000363638 102 ntBASIC0.42□□□□□ -2.34
SHANK3Q9BYB0 MIR136-201ENST00000385207 82 ntBASIC0.42□□□□□ -2.34
SHANK3Q9BYB0 RNU6-510P-201ENST00000391239 108 ntBASIC0.42□□□□□ -2.34
SHANK3Q9BYB0 SNORD111-201ENST00000408139 94 ntBASIC0.42□□□□□ -2.34
SHANK3Q9BYB0 RNU6-864P-201ENST00000516256 108 ntBASIC0.42□□□□□ -2.34
SHANK3Q9BYB0 AC024909.2-201ENST00000553035 286 ntBASIC0.42□□□□□ -2.34
SHANK3Q9BYB0 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.42□□□□□ -2.34
SHANK3Q9BYB0 AL117336.2-201ENST00000602435 335 ntBASIC0.42□□□□□ -2.34
SHANK3Q9BYB0 MTND5P16-201ENST00000460269 1703 ntBASIC0.42□□□□□ -2.34
SHANK3Q9BYB0 RNU4-73P-201ENST00000363164 141 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 Y_RNA.243-201ENST00000364481 109 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 Y_RNA.476-201ENST00000384347 108 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 RNU6-1067P-201ENST00000384752 107 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 Y_RNA.615-201ENST00000410769 117 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 RNU5A-5P-201ENST00000411054 116 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 CALM2P4-201ENST00000430810 426 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 AC093850.1-201ENST00000454121 251 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 U8.19-201ENST00000459095 133 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 U8.22-201ENST00000459141 133 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 AP000870.1-201ENST00000472927 406 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 Y_RNA.700-201ENST00000516806 100 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 Y_RNA.714-201ENST00000517065 90 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 AC018659.1-201ENST00000551083 169 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 MIR4778-201ENST00000577635 80 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 MIR4762-201ENST00000585261 75 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 AL391903.3-201ENST00000612158 163 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 RNU6-451P-201ENST00000362921 107 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 RNU6-1252P-201ENST00000363054 104 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 RNY1P16-201ENST00000363063 111 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 Y_RNA.124-201ENST00000363339 93 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 RNU6-593P-201ENST00000364716 112 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 Y_RNA.336-201ENST00000365307 109 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 Y_RNA.498-201ENST00000384460 102 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 SNORD99-201ENST00000408612 74 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 MIR1468-201ENST00000410600 86 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 AC018865.2-201ENST00000423631 129 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 AC244023.1-201ENST00000426884 112 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 RPEP5-201ENST00000441137 268 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 MTND1P29-201ENST00000448112 647 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 SNORD111.1-201ENST00000516421 86 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 RNU6-197P-201ENST00000516680 100 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 AC105029.1-201ENST00000520250 669 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 Z83818.1-201ENST00000603584 150 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 AC242498.1-201ENST00000604134 111 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 AC243994.1-201ENST00000618627 109 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 AC127459.3-201ENST00000624328 466 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 AC005592.1-201ENST00000566527 1640 ntBASIC0.41□□□□□ -2.34
SHANK3Q9BYB0 Y_RNA.9-201ENST00000362354 101 ntBASIC0.4□□□□□ -2.35
SHANK3Q9BYB0 Y_RNA.364-201ENST00000365532 101 ntBASIC0.4□□□□□ -2.35
SHANK3Q9BYB0 AL137792.2-201ENST00000443484 235 ntBASIC0.4□□□□□ -2.35
SHANK3Q9BYB0 COX6CP6-201ENST00000490840 228 ntBASIC0.4□□□□□ -2.35
SHANK3Q9BYB0 RNU7-43P-201ENST00000516554 64 ntBASIC0.4□□□□□ -2.35
SHANK3Q9BYB0 RNU6-1291P-201ENST00000516591 104 ntBASIC0.4□□□□□ -2.35
SHANK3Q9BYB0 AC026407.1-201ENST00000518369 204 ntBASIC0.4□□□□□ -2.35
SHANK3Q9BYB0 AC022616.4-201ENST00000522985 181 ntBASIC0.4□□□□□ -2.35
SHANK3Q9BYB0 AC018448.1-201ENST00000552843 316 ntBASIC0.4□□□□□ -2.35
SHANK3Q9BYB0 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC0.4□□□□□ -2.35
SHANK3Q9BYB0 AC104260.1-201ENST00000616660 539 ntBASIC0.4□□□□□ -2.35
SHANK3Q9BYB0 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
SHANK3Q9BYB0 RNU6-454P-201ENST00000364292 107 ntBASIC0.39□□□□□ -2.35
SHANK3Q9BYB0 Y_RNA.301-201ENST00000364990 103 ntBASIC0.39□□□□□ -2.35
SHANK3Q9BYB0 RNU6-117P-201ENST00000365415 107 ntBASIC0.39□□□□□ -2.35
SHANK3Q9BYB0 MIR520C-201ENST00000385005 87 ntBASIC0.39□□□□□ -2.35
SHANK3Q9BYB0 SNORD41-201ENST00000386967 70 ntBASIC0.39□□□□□ -2.35
SHANK3Q9BYB0 AC109635.3-201ENST00000529536 185 ntBASIC0.39□□□□□ -2.35
SHANK3Q9BYB0 MIR3192-201ENST00000584920 77 ntBASIC0.39□□□□□ -2.35
SHANK3Q9BYB0 AC104465.1-201ENST00000611365 139 ntBASIC0.39□□□□□ -2.35
SHANK3Q9BYB0 AC007014.2-201ENST00000615581 479 ntBASIC0.39□□□□□ -2.35
SHANK3Q9BYB0 RNA5SP361-201ENST00000362686 118 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 RNA5SP264-201ENST00000363115 107 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 SNORD68-201ENST00000363214 84 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 RNY4P14-201ENST00000363656 96 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 Y_RNA.185-201ENST00000363894 100 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 Y_RNA.330-201ENST00000365230 109 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 AC117470.1-201ENST00000381974 330 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 RNU6-842P-201ENST00000384269 107 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 Y_RNA.517-201ENST00000384551 106 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 SNORA8.3-201ENST00000384679 139 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 SNORD89-201ENST00000390981 114 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 RNU2-16P-201ENST00000410712 136 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 AC009161.1-201ENST00000417306 376 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 AL139396.1-201ENST00000421137 167 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 USP9YP30-201ENST00000430729 455 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 MTND2P22-201ENST00000444325 1033 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 UQCRBP2-201ENST00000447827 297 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 AC098869.1-201ENST00000481627 292 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 AP003716.2-201ENST00000528260 108 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 AP001180.6-201ENST00000584918 159 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 MIR3662-201ENST00000637030 95 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 SNORD113.3-201ENST00000364630 78 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 Y_RNA.457-201ENST00000384237 111 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 MIR526A1-201ENST00000384897 85 ntBASIC0.38□□□□□ -2.35
SHANK3Q9BYB0 RNU1-119P-201ENST00000391122 165 ntBASIC0.38□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms