Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
IFT43Q96FT9 MIR126-201ENST00000362291 85 ntBASIC3.31□□□□□ -1.88
IFT43Q96FT9 RNU1-70P-201ENST00000362618 164 ntBASIC3.31□□□□□ -1.88
IFT43Q96FT9 RNU6-1107P-201ENST00000364817 104 ntBASIC3.31□□□□□ -1.88
IFT43Q96FT9 SNORA25B-201ENST00000365507 128 ntBASIC3.31□□□□□ -1.88
IFT43Q96FT9 MIR570-201ENST00000384917 97 ntBASIC3.31□□□□□ -1.88
IFT43Q96FT9 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
IFT43Q96FT9 TRIAP1P1-201ENST00000427062 225 ntBASIC3.31□□□□□ -1.88
IFT43Q96FT9 RNU6-693P-201ENST00000516134 107 ntBASIC3.31□□□□□ -1.88
IFT43Q96FT9 Y_RNA.666-201ENST00000516187 112 ntBASIC3.31□□□□□ -1.88
IFT43Q96FT9 MIR4325-201ENST00000583049 90 ntBASIC3.31□□□□□ -1.88
IFT43Q96FT9 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.31□□□□□ -1.88
IFT43Q96FT9 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
IFT43Q96FT9 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
IFT43Q96FT9 Y_RNA.99-201ENST00000363138 105 ntBASIC3.3□□□□□ -1.88
IFT43Q96FT9 CALM2P4-201ENST00000430810 426 ntBASIC3.3□□□□□ -1.88
IFT43Q96FT9 RNU1-131P-201ENST00000458943 161 ntBASIC3.3□□□□□ -1.88
IFT43Q96FT9 COX6CP6-201ENST00000490840 228 ntBASIC3.3□□□□□ -1.88
IFT43Q96FT9 RNU6-1149P-201ENST00000516810 97 ntBASIC3.3□□□□□ -1.88
IFT43Q96FT9 RN7SKP282-201ENST00000516824 299 ntBASIC3.3□□□□□ -1.88
IFT43Q96FT9 AL137067.1-201ENST00000615933 120 ntBASIC3.3□□□□□ -1.88
IFT43Q96FT9 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.3□□□□□ -1.88
IFT43Q96FT9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
IFT43Q96FT9 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
IFT43Q96FT9 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
IFT43Q96FT9 Y_RNA.85-201ENST00000363014 111 ntBASIC3.29□□□□□ -1.88
IFT43Q96FT9 SNORD114-6-201ENST00000364393 72 ntBASIC3.29□□□□□ -1.88
IFT43Q96FT9 SNORA48.2-201ENST00000390926 124 ntBASIC3.29□□□□□ -1.88
IFT43Q96FT9 RNA5SP323-201ENST00000391094 133 ntBASIC3.29□□□□□ -1.88
IFT43Q96FT9 SNORD77.3-201ENST00000391113 65 ntBASIC3.29□□□□□ -1.88
IFT43Q96FT9 MIR1289-1-201ENST00000408836 144 ntBASIC3.29□□□□□ -1.88
IFT43Q96FT9 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.29□□□□□ -1.88
IFT43Q96FT9 SNRPGP13-201ENST00000442212 177 ntBASIC3.29□□□□□ -1.88
IFT43Q96FT9 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC3.29□□□□□ -1.88
IFT43Q96FT9 AL049830.1-201ENST00000468034 425 ntBASIC3.29□□□□□ -1.88
IFT43Q96FT9 RN7SL636P-201ENST00000497504 294 ntBASIC3.29□□□□□ -1.88
IFT43Q96FT9 SCGB1D5P-201ENST00000515134 247 ntBASIC3.29□□□□□ -1.88
IFT43Q96FT9 AC024614.2-201ENST00000577584 372 ntBASIC3.29□□□□□ -1.88
IFT43Q96FT9 MIR3616-201ENST00000584070 92 ntBASIC3.29□□□□□ -1.88
IFT43Q96FT9 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.29□□□□□ -1.88
IFT43Q96FT9 AL591926.4-201ENST00000616895 298 ntBASIC3.29□□□□□ -1.88
IFT43Q96FT9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.29□□□□□ -1.88
IFT43Q96FT9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
IFT43Q96FT9 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.29□□□□□ -1.88
IFT43Q96FT9 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.28□□□□□ -1.88
IFT43Q96FT9 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
IFT43Q96FT9 RNU6-461P-201ENST00000364195 107 ntBASIC3.28□□□□□ -1.88
IFT43Q96FT9 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
IFT43Q96FT9 RNY4P30-201ENST00000410216 95 ntBASIC3.28□□□□□ -1.88
IFT43Q96FT9 RNU6-554P-201ENST00000410466 106 ntBASIC3.28□□□□□ -1.88
IFT43Q96FT9 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.28□□□□□ -1.88
IFT43Q96FT9 FTH1P12-201ENST00000432137 551 ntBASIC3.28□□□□□ -1.88
IFT43Q96FT9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.28□□□□□ -1.88
IFT43Q96FT9 ATP5J2P3-201ENST00000451550 258 ntBASIC3.28□□□□□ -1.88
IFT43Q96FT9 RNU7-94P-201ENST00000459576 63 ntBASIC3.28□□□□□ -1.88
IFT43Q96FT9 RN7SL504P-201ENST00000494496 287 ntBASIC3.28□□□□□ -1.88
IFT43Q96FT9 SCARNA15-202ENST00000516881 127 ntBASIC3.28□□□□□ -1.88
IFT43Q96FT9 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.28□□□□□ -1.89
IFT43Q96FT9 AL035425.3-201ENST00000564206 4996 ntBASIC3.28□□□□□ -1.89
IFT43Q96FT9 SNORA8-201ENST00000384574 139 ntBASIC3.27□□□□□ -1.89
IFT43Q96FT9 MIR515-2-201ENST00000384883 83 ntBASIC3.27□□□□□ -1.89
IFT43Q96FT9 MIR515-1-201ENST00000384884 83 ntBASIC3.27□□□□□ -1.89
IFT43Q96FT9 MIR522-201ENST00000385071 87 ntBASIC3.27□□□□□ -1.89
IFT43Q96FT9 SNORD12C-201ENST00000386307 89 ntBASIC3.27□□□□□ -1.89
IFT43Q96FT9 AL117342.1-201ENST00000404861 406 ntBASIC3.27□□□□□ -1.89
IFT43Q96FT9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC3.27□□□□□ -1.89
IFT43Q96FT9 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.27□□□□□ -1.89
IFT43Q96FT9 SCARNA13-201ENST00000516672 275 ntBASIC3.27□□□□□ -1.89
IFT43Q96FT9 AP002004.2-201ENST00000531656 154 ntBASIC3.27□□□□□ -1.89
IFT43Q96FT9 SNORA1B-201ENST00000362535 133 ntBASIC3.26□□□□□ -1.89
IFT43Q96FT9 SNORA33-201ENST00000363664 130 ntBASIC3.26□□□□□ -1.89
IFT43Q96FT9 MIR548A2-201ENST00000384956 97 ntBASIC3.26□□□□□ -1.89
IFT43Q96FT9 RNA5SP229-201ENST00000410809 99 ntBASIC3.26□□□□□ -1.89
IFT43Q96FT9 RN7SKP284-201ENST00000411002 343 ntBASIC3.26□□□□□ -1.89
IFT43Q96FT9 RNA5SP344-201ENST00000411081 104 ntBASIC3.26□□□□□ -1.89
IFT43Q96FT9 S100A11P2-201ENST00000467589 312 ntBASIC3.26□□□□□ -1.89
IFT43Q96FT9 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.26□□□□□ -1.89
IFT43Q96FT9 AC091826.1-201ENST00000514065 313 ntBASIC3.26□□□□□ -1.89
IFT43Q96FT9 AC024995.1-201ENST00000523014 93 ntBASIC3.26□□□□□ -1.89
IFT43Q96FT9 AC022217.4-201ENST00000604389 163 ntBASIC3.26□□□□□ -1.89
IFT43Q96FT9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
IFT43Q96FT9 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
IFT43Q96FT9 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
IFT43Q96FT9 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.25□□□□□ -1.89
IFT43Q96FT9 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
IFT43Q96FT9 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
IFT43Q96FT9 RNU6-766P-201ENST00000362478 107 ntBASIC3.25□□□□□ -1.89
IFT43Q96FT9 RNA5SP374-201ENST00000362939 125 ntBASIC3.25□□□□□ -1.89
IFT43Q96FT9 Y_RNA.366-201ENST00000365540 102 ntBASIC3.25□□□□□ -1.89
IFT43Q96FT9 RNU6-160P-201ENST00000384591 107 ntBASIC3.25□□□□□ -1.89
IFT43Q96FT9 RNU6-1072P-201ENST00000384703 107 ntBASIC3.25□□□□□ -1.89
IFT43Q96FT9 RNU6-443P-201ENST00000384780 107 ntBASIC3.25□□□□□ -1.89
IFT43Q96FT9 MIR128-1-201ENST00000384921 82 ntBASIC3.25□□□□□ -1.89
IFT43Q96FT9 MIR1302-5-201ENST00000408164 150 ntBASIC3.25□□□□□ -1.89
IFT43Q96FT9 RPL32P35-201ENST00000415214 394 ntBASIC3.25□□□□□ -1.89
IFT43Q96FT9 AC007536.1-201ENST00000533382 349 ntBASIC3.25□□□□□ -1.89
IFT43Q96FT9 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
IFT43Q96FT9 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
IFT43Q96FT9 FAM35CP-201ENST00000554755 2470 ntBASIC3.25□□□□□ -1.89
IFT43Q96FT9 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 226.2 ms