Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.63□□□□□ -1.99
SYNE4Q8N205 RPL23AP7-203ENST00000449021 469 ntBASIC2.63□□□□□ -1.99
SYNE4Q8N205 RNU7-197P-201ENST00000458836 62 ntBASIC2.63□□□□□ -1.99
SYNE4Q8N205 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.63□□□□□ -1.99
SYNE4Q8N205 RNU6-63P-201ENST00000516690 95 ntBASIC2.63□□□□□ -1.99
SYNE4Q8N205 RNU6-1234P-201ENST00000516877 103 ntBASIC2.63□□□□□ -1.99
SYNE4Q8N205 AC027419.1-201ENST00000522976 328 ntBASIC2.63□□□□□ -1.99
SYNE4Q8N205 MIR3684-201ENST00000579779 74 ntBASIC2.63□□□□□ -1.99
SYNE4Q8N205 MIR3117-201ENST00000584034 78 ntBASIC2.63□□□□□ -1.99
SYNE4Q8N205 AL356280.1-201ENST00000603614 379 ntBASIC2.63□□□□□ -1.99
SYNE4Q8N205 MIR6132-201ENST00000622083 109 ntBASIC2.63□□□□□ -1.99
SYNE4Q8N205 AC068647.2-201ENST00000637380 353 ntBASIC2.63□□□□□ -1.99
SYNE4Q8N205 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.63□□□□□ -1.99
SYNE4Q8N205 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.62□□□□□ -1.99
SYNE4Q8N205 RNU6-417P-201ENST00000384712 107 ntBASIC2.62□□□□□ -1.99
SYNE4Q8N205 MIR526A2-201ENST00000390198 65 ntBASIC2.62□□□□□ -1.99
SYNE4Q8N205 SNORA17.3-201ENST00000391159 129 ntBASIC2.62□□□□□ -1.99
SYNE4Q8N205 AL606845.1-201ENST00000404881 255 ntBASIC2.62□□□□□ -1.99
SYNE4Q8N205 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.62□□□□□ -1.99
SYNE4Q8N205 RNU7-14P-201ENST00000459331 62 ntBASIC2.62□□□□□ -1.99
SYNE4Q8N205 AC107027.2-201ENST00000512197 115 ntBASIC2.62□□□□□ -1.99
SYNE4Q8N205 MIR5002-201ENST00000584713 97 ntBASIC2.62□□□□□ -1.99
SYNE4Q8N205 DNAJC19P2-201ENST00000593340 302 ntBASIC2.62□□□□□ -1.99
SYNE4Q8N205 AC080100.1-201ENST00000624239 5356 ntBASIC2.62□□□□□ -1.99
SYNE4Q8N205 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.62□□□□□ -1.99
SYNE4Q8N205 Y_RNA.81-201ENST00000362997 102 ntBASIC2.61□□□□□ -1.99
SYNE4Q8N205 Y_RNA.420-201ENST00000384043 110 ntBASIC2.61□□□□□ -1.99
SYNE4Q8N205 Y_RNA.542-201ENST00000384641 111 ntBASIC2.61□□□□□ -1.99
SYNE4Q8N205 MIR627-201ENST00000384979 97 ntBASIC2.61□□□□□ -1.99
SYNE4Q8N205 MIR15B-201ENST00000385045 98 ntBASIC2.61□□□□□ -1.99
SYNE4Q8N205 MIR1283-1-201ENST00000408494 87 ntBASIC2.61□□□□□ -1.99
SYNE4Q8N205 MIR1278-201ENST00000408753 81 ntBASIC2.61□□□□□ -1.99
SYNE4Q8N205 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.61□□□□□ -1.99
SYNE4Q8N205 HSPE1P21-201ENST00000438283 308 ntBASIC2.61□□□□□ -1.99
SYNE4Q8N205 AL121914.1-201ENST00000450188 156 ntBASIC2.61□□□□□ -1.99
SYNE4Q8N205 AC011753.1-201ENST00000451001 220 ntBASIC2.61□□□□□ -1.99
SYNE4Q8N205 RNU7-57P-201ENST00000459540 60 ntBASIC2.61□□□□□ -1.99
SYNE4Q8N205 RNU7-115P-201ENST00000516433 55 ntBASIC2.61□□□□□ -1.99
SYNE4Q8N205 RNU6-62P-201ENST00000516526 102 ntBASIC2.61□□□□□ -1.99
SYNE4Q8N205 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.61□□□□□ -1.99
SYNE4Q8N205 AL137847.3-201ENST00000611521 109 ntBASIC2.61□□□□□ -1.99
SYNE4Q8N205 MIR548AY-201ENST00000617669 107 ntBASIC2.61□□□□□ -1.99
SYNE4Q8N205 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
SYNE4Q8N205 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
SYNE4Q8N205 SNORA27.1-201ENST00000362604 124 ntBASIC2.6□□□□□ -1.99
SYNE4Q8N205 RNU1-23P-201ENST00000363361 144 ntBASIC2.6□□□□□ -1.99
SYNE4Q8N205 RNU6-768P-201ENST00000384683 107 ntBASIC2.6□□□□□ -1.99
SYNE4Q8N205 MIR95-201ENST00000385072 81 ntBASIC2.6□□□□□ -1.99
SYNE4Q8N205 RNU6-460P-201ENST00000391158 108 ntBASIC2.6□□□□□ -1.99
SYNE4Q8N205 RNA5SP181-201ENST00000410246 98 ntBASIC2.6□□□□□ -1.99
SYNE4Q8N205 SNORA36B-201ENST00000410438 131 ntBASIC2.6□□□□□ -1.99
SYNE4Q8N205 AC016909.1-201ENST00000415916 166 ntBASIC2.6□□□□□ -1.99
SYNE4Q8N205 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.6□□□□□ -1.99
SYNE4Q8N205 SNORD65B-201ENST00000459126 73 ntBASIC2.6□□□□□ -1.99
SYNE4Q8N205 AC114982.1-201ENST00000469402 321 ntBASIC2.6□□□□□ -1.99
SYNE4Q8N205 AC092991.1-201ENST00000477176 376 ntBASIC2.6□□□□□ -1.99
SYNE4Q8N205 AC018630.3-201ENST00000542637 96 ntBASIC2.6□□□□□ -1.99
SYNE4Q8N205 AL031274.2-201ENST00000599419 203 ntBASIC2.6□□□□□ -1.99
SYNE4Q8N205 snoU13.31-201ENST00000607291 104 ntBASIC2.6□□□□□ -1.99
SYNE4Q8N205 AL391903.3-201ENST00000612158 163 ntBASIC2.6□□□□□ -1.99
SYNE4Q8N205 MIR5739-201ENST00000619803 80 ntBASIC2.6□□□□□ -1.99
SYNE4Q8N205 AC131280.1-202ENST00000624067 4211 ntBASIC2.6□□□□□ -1.99
SYNE4Q8N205 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.6□□□□□ -1.99
SYNE4Q8N205 MIR6073-201ENST00000352083 89 ntBASIC2.59□□□□□ -1.99
SYNE4Q8N205 Y_RNA.71-201ENST00000362892 104 ntBASIC2.59□□□□□ -1.99
SYNE4Q8N205 VTRNA1-1-201ENST00000363120 99 ntBASIC2.59□□□□□ -1.99
SYNE4Q8N205 RNA5SP125-201ENST00000364843 120 ntBASIC2.59□□□□□ -1.99
SYNE4Q8N205 RNU6-1336P-201ENST00000383886 109 ntBASIC2.59□□□□□ -1.99
SYNE4Q8N205 RNU6-643P-201ENST00000384018 107 ntBASIC2.59□□□□□ -1.99
SYNE4Q8N205 Y_RNA.525-201ENST00000384570 113 ntBASIC2.59□□□□□ -1.99
SYNE4Q8N205 SNORA40-201ENST00000388090 126 ntBASIC2.59□□□□□ -1.99
SYNE4Q8N205 MIR873-201ENST00000401120 77 ntBASIC2.59□□□□□ -1.99
SYNE4Q8N205 RNU6-57P-201ENST00000411348 103 ntBASIC2.59□□□□□ -1.99
SYNE4Q8N205 AL445687.1-201ENST00000439946 251 ntBASIC2.59□□□□□ -1.99
SYNE4Q8N205 AL161788.1-201ENST00000441805 169 ntBASIC2.59□□□□□ -1.99
SYNE4Q8N205 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.59□□□□□ -1.99
SYNE4Q8N205 RNU6-965P-201ENST00000516721 96 ntBASIC2.59□□□□□ -1.99
SYNE4Q8N205 RNU6-826P-201ENST00000516827 104 ntBASIC2.59□□□□□ -1.99
SYNE4Q8N205 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
SYNE4Q8N205 MIR4724-201ENST00000579485 89 ntBASIC2.59□□□□□ -1.99
SYNE4Q8N205 MIR3616-201ENST00000584070 92 ntBASIC2.59□□□□□ -1.99
SYNE4Q8N205 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
SYNE4Q8N205 MIR8070-201ENST00000616510 88 ntBASIC2.59□□□□□ -1.99
SYNE4Q8N205 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
SYNE4Q8N205 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -2
SYNE4Q8N205 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
SYNE4Q8N205 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
SYNE4Q8N205 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
SYNE4Q8N205 SNORD50B-201ENST00000364995 70 ntBASIC2.58□□□□□ -2
SYNE4Q8N205 RNU6-234P-201ENST00000365229 104 ntBASIC2.58□□□□□ -2
SYNE4Q8N205 SNORD20-201ENST00000384550 80 ntBASIC2.58□□□□□ -2
SYNE4Q8N205 MIR583-201ENST00000384846 75 ntBASIC2.58□□□□□ -2
SYNE4Q8N205 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.58□□□□□ -2
SYNE4Q8N205 Y_RNA.622-201ENST00000411091 108 ntBASIC2.58□□□□□ -2
SYNE4Q8N205 RNU6-1211P-201ENST00000459179 105 ntBASIC2.58□□□□□ -2
SYNE4Q8N205 RPS26P55-201ENST00000471178 356 ntBASIC2.58□□□□□ -2
SYNE4Q8N205 RNU6-1333P-201ENST00000516162 93 ntBASIC2.58□□□□□ -2
SYNE4Q8N205 SNORA48.11-201ENST00000517015 89 ntBASIC2.58□□□□□ -2
SYNE4Q8N205 AC112693.2-201ENST00000556538 232 ntBASIC2.58□□□□□ -2
SYNE4Q8N205 snoZ196.1-201ENST00000625269 89 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 171.4 ms