Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC136443.5-201ENST00000603741 370 ntBASIC0.84□□□□□ -2.27
HMGCS1Q01581 MIR6504-201ENST00000613520 61 ntBASIC0.84□□□□□ -2.27
HMGCS1Q01581 SNORD114-7-201ENST00000362520 77 ntBASIC0.83□□□□□ -2.28
HMGCS1Q01581 Y_RNA.259-201ENST00000364619 101 ntBASIC0.83□□□□□ -2.28
HMGCS1Q01581 SNORA2.2-201ENST00000365473 135 ntBASIC0.83□□□□□ -2.28
HMGCS1Q01581 Y_RNA.363-201ENST00000365529 113 ntBASIC0.83□□□□□ -2.28
HMGCS1Q01581 Y_RNA.387-201ENST00000383918 102 ntBASIC0.83□□□□□ -2.28
HMGCS1Q01581 MIR526A1-201ENST00000384897 85 ntBASIC0.83□□□□□ -2.28
HMGCS1Q01581 RNU6-910P-201ENST00000390844 107 ntBASIC0.83□□□□□ -2.28
HMGCS1Q01581 AL451046.2-201ENST00000403074 277 ntBASIC0.83□□□□□ -2.28
HMGCS1Q01581 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.83□□□□□ -2.28
HMGCS1Q01581 RNU2-54P-201ENST00000410299 190 ntBASIC0.83□□□□□ -2.28
HMGCS1Q01581 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC0.83□□□□□ -2.28
HMGCS1Q01581 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.83□□□□□ -2.28
HMGCS1Q01581 Y_RNA.718-201ENST00000517110 102 ntBASIC0.83□□□□□ -2.28
HMGCS1Q01581 MIR4698-201ENST00000577795 80 ntBASIC0.83□□□□□ -2.28
HMGCS1Q01581 MIR4659A-201ENST00000580269 81 ntBASIC0.83□□□□□ -2.28
HMGCS1Q01581 MIR6857-201ENST00000613267 93 ntBASIC0.83□□□□□ -2.28
HMGCS1Q01581 AC025253.1-201ENST00000613623 543 ntBASIC0.83□□□□□ -2.28
HMGCS1Q01581 U2.1-201ENST00000618978 145 ntBASIC0.83□□□□□ -2.28
HMGCS1Q01581 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
HMGCS1Q01581 RNU6-490P-201ENST00000362985 107 ntBASIC0.82□□□□□ -2.28
HMGCS1Q01581 Y_RNA.303-201ENST00000364998 94 ntBASIC0.82□□□□□ -2.28
HMGCS1Q01581 Y_RNA.446-201ENST00000384178 104 ntBASIC0.82□□□□□ -2.28
HMGCS1Q01581 SNORD78.2-201ENST00000391076 69 ntBASIC0.82□□□□□ -2.28
HMGCS1Q01581 RNY4P36-201ENST00000391116 96 ntBASIC0.82□□□□□ -2.28
HMGCS1Q01581 Y_RNA.621-201ENST00000411065 96 ntBASIC0.82□□□□□ -2.28
HMGCS1Q01581 RNU6-1054P-201ENST00000411293 104 ntBASIC0.82□□□□□ -2.28
HMGCS1Q01581 PIGPP3-201ENST00000425307 415 ntBASIC0.82□□□□□ -2.28
HMGCS1Q01581 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC0.82□□□□□ -2.28
HMGCS1Q01581 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.82□□□□□ -2.28
HMGCS1Q01581 SNORA25.10-201ENST00000515926 124 ntBASIC0.82□□□□□ -2.28
HMGCS1Q01581 RNU6-436P-201ENST00000516171 114 ntBASIC0.82□□□□□ -2.28
HMGCS1Q01581 SNORA70.22-201ENST00000517160 124 ntBASIC0.82□□□□□ -2.28
HMGCS1Q01581 AL358944.1-201ENST00000528537 144 ntBASIC0.82□□□□□ -2.28
HMGCS1Q01581 AC005176.2-201ENST00000596933 147 ntBASIC0.82□□□□□ -2.28
HMGCS1Q01581 AC006380.1-201ENST00000603598 186 ntBASIC0.82□□□□□ -2.28
HMGCS1Q01581 FAM71BP1-201ENST00000604431 523 ntBASIC0.82□□□□□ -2.28
HMGCS1Q01581 AL132765.2-201ENST00000610812 351 ntBASIC0.82□□□□□ -2.28
HMGCS1Q01581 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.82□□□□□ -2.28
HMGCS1Q01581 AC084781.2-201ENST00000615568 161 ntBASIC0.82□□□□□ -2.28
HMGCS1Q01581 U6.92-201ENST00000636464 89 ntBASIC0.82□□□□□ -2.28
HMGCS1Q01581 MIR1302-1-201ENST00000637932 143 ntBASIC0.82□□□□□ -2.28
HMGCS1Q01581 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.82□□□□□ -2.28
HMGCS1Q01581 SNORD68-201ENST00000363214 84 ntBASIC0.81□□□□□ -2.28
HMGCS1Q01581 SNORA72.1-201ENST00000363485 129 ntBASIC0.81□□□□□ -2.28
HMGCS1Q01581 RNU6-324P-201ENST00000363957 106 ntBASIC0.81□□□□□ -2.28
HMGCS1Q01581 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.81□□□□□ -2.28
HMGCS1Q01581 AC245047.7-201ENST00000440265 293 ntBASIC0.81□□□□□ -2.28
HMGCS1Q01581 AC091951.2-201ENST00000500762 203 ntBASIC0.81□□□□□ -2.28
HMGCS1Q01581 RNU6-322P-201ENST00000516010 103 ntBASIC0.81□□□□□ -2.28
HMGCS1Q01581 RNU6-155P-201ENST00000516347 100 ntBASIC0.81□□□□□ -2.28
HMGCS1Q01581 AC136932.1-201ENST00000574771 208 ntBASIC0.81□□□□□ -2.28
HMGCS1Q01581 MIR3973-201ENST00000579824 107 ntBASIC0.81□□□□□ -2.28
HMGCS1Q01581 FAM106DP-201ENST00000586416 501 ntBASIC0.81□□□□□ -2.28
HMGCS1Q01581 UBE2V2P2-201ENST00000587677 504 ntBASIC0.81□□□□□ -2.28
HMGCS1Q01581 AL591926.4-201ENST00000616895 298 ntBASIC0.81□□□□□ -2.28
HMGCS1Q01581 MIR373-201ENST00000362273 69 ntBASIC0.8□□□□□ -2.28
HMGCS1Q01581 RNU4-79P-201ENST00000362764 141 ntBASIC0.8□□□□□ -2.28
HMGCS1Q01581 RNU6-833P-201ENST00000363486 107 ntBASIC0.8□□□□□ -2.28
HMGCS1Q01581 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
HMGCS1Q01581 SNORD114-22-201ENST00000365423 72 ntBASIC0.8□□□□□ -2.28
HMGCS1Q01581 Y_RNA.384-201ENST00000383909 102 ntBASIC0.8□□□□□ -2.28
HMGCS1Q01581 RNU6-1040P-201ENST00000383974 107 ntBASIC0.8□□□□□ -2.28
HMGCS1Q01581 MIR499A-201ENST00000384903 122 ntBASIC0.8□□□□□ -2.28
HMGCS1Q01581 MIR628-201ENST00000385229 95 ntBASIC0.8□□□□□ -2.28
HMGCS1Q01581 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.8□□□□□ -2.28
HMGCS1Q01581 RNU2-61P-201ENST00000411069 191 ntBASIC0.8□□□□□ -2.28
HMGCS1Q01581 POLR2J4-204ENST00000418424 324 ntBASIC0.8□□□□□ -2.28
HMGCS1Q01581 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.8□□□□□ -2.28
HMGCS1Q01581 AC114811.1-201ENST00000507207 168 ntBASIC0.8□□□□□ -2.28
HMGCS1Q01581 SNORA70.12-201ENST00000516084 153 ntBASIC0.8□□□□□ -2.28
HMGCS1Q01581 AC011604.1-201ENST00000545978 196 ntBASIC0.8□□□□□ -2.28
HMGCS1Q01581 AC120024.3-201ENST00000603167 156 ntBASIC0.8□□□□□ -2.28
HMGCS1Q01581 AL020996.3-201ENST00000606617 222 ntBASIC0.8□□□□□ -2.28
HMGCS1Q01581 AC004832.4-201ENST00000608952 331 ntBASIC0.8□□□□□ -2.28
HMGCS1Q01581 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.8□□□□□ -2.28
HMGCS1Q01581 AC133104.2-201ENST00000615272 193 ntBASIC0.8□□□□□ -2.28
HMGCS1Q01581 AL008636.1-201ENST00000625038 1018 ntBASIC0.8□□□□□ -2.28
HMGCS1Q01581 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
HMGCS1Q01581 Y_RNA.238-201ENST00000364441 102 ntBASIC0.79□□□□□ -2.28
HMGCS1Q01581 Y_RNA.463-201ENST00000384271 102 ntBASIC0.79□□□□□ -2.28
HMGCS1Q01581 RNU6-163P-201ENST00000384396 106 ntBASIC0.79□□□□□ -2.28
HMGCS1Q01581 MIR891A-201ENST00000401237 79 ntBASIC0.79□□□□□ -2.28
HMGCS1Q01581 AC099799.1-201ENST00000439809 192 ntBASIC0.79□□□□□ -2.28
HMGCS1Q01581 AC093019.1-201ENST00000443135 252 ntBASIC0.79□□□□□ -2.28
HMGCS1Q01581 snoU13.25-201ENST00000458945 104 ntBASIC0.79□□□□□ -2.28
HMGCS1Q01581 Y_RNA.632-201ENST00000459189 102 ntBASIC0.79□□□□□ -2.28
HMGCS1Q01581 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC0.79□□□□□ -2.28
HMGCS1Q01581 AC006600.1-201ENST00000572529 153 ntBASIC0.79□□□□□ -2.28
HMGCS1Q01581 AL355375.2-201ENST00000574825 175 ntBASIC0.79□□□□□ -2.28
HMGCS1Q01581 MIR4661-201ENST00000582720 75 ntBASIC0.79□□□□□ -2.28
HMGCS1Q01581 AC013244.2-201ENST00000603396 103 ntBASIC0.79□□□□□ -2.28
HMGCS1Q01581 AL096861.1-201ENST00000610899 123 ntBASIC0.79□□□□□ -2.28
HMGCS1Q01581 AC104985.2-201ENST00000620598 500 ntBASIC0.79□□□□□ -2.28
HMGCS1Q01581 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.79□□□□□ -2.28
HMGCS1Q01581 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.79□□□□□ -2.28
HMGCS1Q01581 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
HMGCS1Q01581 Y_RNA.27-201ENST00000362540 103 ntBASIC0.78□□□□□ -2.28
HMGCS1Q01581 Y_RNA.146-201ENST00000363549 102 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 319.5 ms