Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 EEF1A1P41-201ENST00000414667 207 ntBASIC2.81□□□□□ -1.96
YBX1P67809 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.81□□□□□ -1.96
YBX1P67809 AL513477.1-202ENST00000417061 214 ntBASIC2.81□□□□□ -1.96
YBX1P67809 AC022018.1-201ENST00000430685 241 ntBASIC2.81□□□□□ -1.96
YBX1P67809 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.81□□□□□ -1.96
YBX1P67809 MTATP6P21-201ENST00000440681 189 ntBASIC2.81□□□□□ -1.96
YBX1P67809 SNORA72.7-201ENST00000516349 94 ntBASIC2.81□□□□□ -1.96
YBX1P67809 PRELID2P1-201ENST00000552837 301 ntBASIC2.81□□□□□ -1.96
YBX1P67809 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.81□□□□□ -1.96
YBX1P67809 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
YBX1P67809 RN7SKP123-201ENST00000410732 291 ntBASIC2.8□□□□□ -1.96
YBX1P67809 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.8□□□□□ -1.96
YBX1P67809 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.8□□□□□ -1.96
YBX1P67809 MTCO1P44-201ENST00000441935 243 ntBASIC2.8□□□□□ -1.96
YBX1P67809 SCGB1D5P-201ENST00000515134 247 ntBASIC2.8□□□□□ -1.96
YBX1P67809 RNU6-504P-201ENST00000516568 104 ntBASIC2.8□□□□□ -1.96
YBX1P67809 AC007751.1-201ENST00000529260 376 ntBASIC2.8□□□□□ -1.96
YBX1P67809 MIR3129-201ENST00000581095 76 ntBASIC2.8□□□□□ -1.96
YBX1P67809 MIR4435-1-201ENST00000582552 80 ntBASIC2.8□□□□□ -1.96
YBX1P67809 U6.73-201ENST00000619194 103 ntBASIC2.8□□□□□ -1.96
YBX1P67809 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.8□□□□□ -1.96
YBX1P67809 MTND5P18-201ENST00000445624 1801 ntBASIC2.79□□□□□ -1.96
YBX1P67809 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
YBX1P67809 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
YBX1P67809 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
YBX1P67809 MIR450A1-201ENST00000362262 91 ntBASIC2.79□□□□□ -1.96
YBX1P67809 MIR1263-201ENST00000408324 86 ntBASIC2.79□□□□□ -1.96
YBX1P67809 MIR1261-201ENST00000408659 82 ntBASIC2.79□□□□□ -1.96
YBX1P67809 AF228730.3-201ENST00000436691 102 ntBASIC2.79□□□□□ -1.96
YBX1P67809 AL021397.1-201ENST00000451806 248 ntBASIC2.79□□□□□ -1.96
YBX1P67809 CKS1BP2-201ENST00000497342 240 ntBASIC2.79□□□□□ -1.96
YBX1P67809 AC096725.1-201ENST00000514266 313 ntBASIC2.79□□□□□ -1.96
YBX1P67809 RNA5SP385-201ENST00000515947 110 ntBASIC2.79□□□□□ -1.96
YBX1P67809 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.79□□□□□ -1.96
YBX1P67809 AL365205.2-201ENST00000594586 68 ntBASIC2.79□□□□□ -1.96
YBX1P67809 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC2.79□□□□□ -1.96
YBX1P67809 MIR7515-201ENST00000637837 67 ntBASIC2.79□□□□□ -1.96
YBX1P67809 AC080128.1-201ENST00000474389 1917 ntBASIC2.79□□□□□ -1.96
YBX1P67809 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
YBX1P67809 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.78□□□□□ -1.96
YBX1P67809 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
YBX1P67809 Y_RNA.66-201ENST00000362862 102 ntBASIC2.78□□□□□ -1.96
YBX1P67809 SNORA1-201ENST00000384107 130 ntBASIC2.78□□□□□ -1.96
YBX1P67809 MIRLET7F2-201ENST00000385277 83 ntBASIC2.78□□□□□ -1.96
YBX1P67809 RNU6-1186P-201ENST00000410429 97 ntBASIC2.78□□□□□ -1.96
YBX1P67809 RNU6-1328P-201ENST00000410938 106 ntBASIC2.78□□□□□ -1.96
YBX1P67809 HMGN2P34-201ENST00000437647 269 ntBASIC2.78□□□□□ -1.96
YBX1P67809 AL161788.1-201ENST00000441805 169 ntBASIC2.78□□□□□ -1.96
YBX1P67809 AL031737.1-201ENST00000450125 223 ntBASIC2.78□□□□□ -1.96
YBX1P67809 AC233266.1-201ENST00000454518 96 ntBASIC2.78□□□□□ -1.96
YBX1P67809 SCARNA3-201ENST00000517097 143 ntBASIC2.78□□□□□ -1.96
YBX1P67809 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.78□□□□□ -1.96
YBX1P67809 MIR3199-1-201ENST00000582434 88 ntBASIC2.78□□□□□ -1.96
YBX1P67809 AC073413.2-201ENST00000604332 360 ntBASIC2.78□□□□□ -1.96
YBX1P67809 AC242852.1-201ENST00000612151 96 ntBASIC2.78□□□□□ -1.96
YBX1P67809 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.78□□□□□ -1.96
YBX1P67809 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.78□□□□□ -1.96
YBX1P67809 AC244015.1-201ENST00000622301 99 ntBASIC2.78□□□□□ -1.96
YBX1P67809 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.78□□□□□ -1.96
YBX1P67809 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
YBX1P67809 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
YBX1P67809 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
YBX1P67809 Y_RNA.495-201ENST00000384435 112 ntBASIC2.77□□□□□ -1.97
YBX1P67809 MIR520G-201ENST00000385064 90 ntBASIC2.77□□□□□ -1.97
YBX1P67809 AC123900.1-201ENST00000420390 96 ntBASIC2.77□□□□□ -1.97
YBX1P67809 AL135938.1-201ENST00000443141 297 ntBASIC2.77□□□□□ -1.97
YBX1P67809 UBL5P3-201ENST00000475112 231 ntBASIC2.77□□□□□ -1.97
YBX1P67809 MRPS17P9-201ENST00000511924 393 ntBASIC2.77□□□□□ -1.97
YBX1P67809 RNU6-991P-201ENST00000516168 107 ntBASIC2.77□□□□□ -1.97
YBX1P67809 AC079600.2-201ENST00000550076 130 ntBASIC2.77□□□□□ -1.97
YBX1P67809 MIR4506-201ENST00000584693 77 ntBASIC2.77□□□□□ -1.97
YBX1P67809 U2.20-201ENST00000613956 192 ntBASIC2.77□□□□□ -1.97
YBX1P67809 MIR5739-201ENST00000619803 80 ntBASIC2.77□□□□□ -1.97
YBX1P67809 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.77□□□□□ -1.97
YBX1P67809 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
YBX1P67809 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
YBX1P67809 Y_RNA.116-201ENST00000363292 103 ntBASIC2.76□□□□□ -1.97
YBX1P67809 RNU6-32P-201ENST00000383948 107 ntBASIC2.76□□□□□ -1.97
YBX1P67809 RNU6-13P-201ENST00000384248 107 ntBASIC2.76□□□□□ -1.97
YBX1P67809 RNU6-12P-201ENST00000384604 107 ntBASIC2.76□□□□□ -1.97
YBX1P67809 RNU6-41P-201ENST00000384741 107 ntBASIC2.76□□□□□ -1.97
YBX1P67809 SNORA12.1-201ENST00000390873 148 ntBASIC2.76□□□□□ -1.97
YBX1P67809 FO393413.1-201ENST00000402892 195 ntBASIC2.76□□□□□ -1.97
YBX1P67809 AC018634.1-201ENST00000437554 401 ntBASIC2.76□□□□□ -1.97
YBX1P67809 NDUFA4P2-201ENST00000489989 244 ntBASIC2.76□□□□□ -1.97
YBX1P67809 HMGN1P7-201ENST00000491722 313 ntBASIC2.76□□□□□ -1.97
YBX1P67809 RN7SKP132-201ENST00000516001 208 ntBASIC2.76□□□□□ -1.97
YBX1P67809 Y_RNA.694-201ENST00000516677 117 ntBASIC2.76□□□□□ -1.97
YBX1P67809 RNU6-1270P-201ENST00000517128 108 ntBASIC2.76□□□□□ -1.97
YBX1P67809 uc_338.28-201ENST00000612082 187 ntBASIC2.76□□□□□ -1.97
YBX1P67809 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
YBX1P67809 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.75□□□□□ -1.97
YBX1P67809 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
YBX1P67809 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
YBX1P67809 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
YBX1P67809 SNORD61-201ENST00000384252 73 ntBASIC2.75□□□□□ -1.97
YBX1P67809 MIR627-201ENST00000384979 97 ntBASIC2.75□□□□□ -1.97
YBX1P67809 AC060773.1-201ENST00000421698 310 ntBASIC2.75□□□□□ -1.97
YBX1P67809 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.75□□□□□ -1.97
YBX1P67809 SNRPGP10-201ENST00000432323 225 ntBASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 167.3 ms