Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC022079.1-201ENST00000621546 602 ntBASIC0.44□□□□□ -2.34
RFC3P40938 MIR3662-201ENST00000637030 95 ntBASIC0.44□□□□□ -2.34
RFC3P40938 RNA5SP325-201ENST00000363756 130 ntBASIC0.43□□□□□ -2.34
RFC3P40938 RNA5SP48-201ENST00000363969 126 ntBASIC0.43□□□□□ -2.34
RFC3P40938 RNU6-1090P-201ENST00000364065 94 ntBASIC0.43□□□□□ -2.34
RFC3P40938 SNORD14.1-201ENST00000365609 90 ntBASIC0.43□□□□□ -2.34
RFC3P40938 RNU6-945P-201ENST00000383947 107 ntBASIC0.43□□□□□ -2.34
RFC3P40938 RNU6-1297P-201ENST00000384415 104 ntBASIC0.43□□□□□ -2.34
RFC3P40938 RNU6-1067P-201ENST00000384752 107 ntBASIC0.43□□□□□ -2.34
RFC3P40938 MIR193B-201ENST00000384907 83 ntBASIC0.43□□□□□ -2.34
RFC3P40938 MIR15B-201ENST00000385045 98 ntBASIC0.43□□□□□ -2.34
RFC3P40938 RNU6-700P-201ENST00000391043 107 ntBASIC0.43□□□□□ -2.34
RFC3P40938 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.43□□□□□ -2.34
RFC3P40938 AC009161.1-201ENST00000417306 376 ntBASIC0.43□□□□□ -2.34
RFC3P40938 AC067940.1-201ENST00000458411 300 ntBASIC0.43□□□□□ -2.34
RFC3P40938 RNU6-506P-201ENST00000516553 94 ntBASIC0.43□□□□□ -2.34
RFC3P40938 RNU7-43P-201ENST00000516554 64 ntBASIC0.43□□□□□ -2.34
RFC3P40938 RNU11-2P-201ENST00000516898 142 ntBASIC0.43□□□□□ -2.34
RFC3P40938 AC036111.3-201ENST00000526389 112 ntBASIC0.43□□□□□ -2.34
RFC3P40938 MIR4764-201ENST00000580680 88 ntBASIC0.43□□□□□ -2.34
RFC3P40938 AC005730.3-201ENST00000583067 366 ntBASIC0.43□□□□□ -2.34
RFC3P40938 AC005014.2-201ENST00000607795 599 ntBASIC0.43□□□□□ -2.34
RFC3P40938 AC007742.2-201ENST00000618226 398 ntBASIC0.43□□□□□ -2.34
RFC3P40938 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.43□□□□□ -2.34
RFC3P40938 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.43□□□□□ -2.34
RFC3P40938 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.43□□□□□ -2.34
RFC3P40938 RNU6-874P-201ENST00000362390 105 ntBASIC0.42□□□□□ -2.34
RFC3P40938 RNY1P16-201ENST00000363063 111 ntBASIC0.42□□□□□ -2.34
RFC3P40938 Y_RNA.402-201ENST00000383972 102 ntBASIC0.42□□□□□ -2.34
RFC3P40938 RNU6-1310P-201ENST00000384153 107 ntBASIC0.42□□□□□ -2.34
RFC3P40938 MIR516B2-201ENST00000385190 85 ntBASIC0.42□□□□□ -2.34
RFC3P40938 SNORD111-201ENST00000408139 94 ntBASIC0.42□□□□□ -2.34
RFC3P40938 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.42□□□□□ -2.34
RFC3P40938 RNU7-87P-201ENST00000459343 62 ntBASIC0.42□□□□□ -2.34
RFC3P40938 SNORA40.9-201ENST00000515895 93 ntBASIC0.42□□□□□ -2.34
RFC3P40938 MTND2P38-201ENST00000522536 667 ntBASIC0.42□□□□□ -2.34
RFC3P40938 SNORD18A-201ENST00000363753 72 ntBASIC0.41□□□□□ -2.34
RFC3P40938 RNU6-318P-201ENST00000384283 103 ntBASIC0.41□□□□□ -2.34
RFC3P40938 RNU1-119P-201ENST00000391122 165 ntBASIC0.41□□□□□ -2.34
RFC3P40938 RNU6-1148P-201ENST00000410992 104 ntBASIC0.41□□□□□ -2.34
RFC3P40938 Y_RNA.621-201ENST00000411065 96 ntBASIC0.41□□□□□ -2.34
RFC3P40938 AL139396.1-201ENST00000421137 167 ntBASIC0.41□□□□□ -2.34
RFC3P40938 AC092423.1-201ENST00000430165 186 ntBASIC0.41□□□□□ -2.34
RFC3P40938 AC098826.2-201ENST00000452011 651 ntBASIC0.41□□□□□ -2.34
RFC3P40938 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.41□□□□□ -2.34
RFC3P40938 RNU6-314P-201ENST00000516574 104 ntBASIC0.41□□□□□ -2.34
RFC3P40938 AC018462.2-201ENST00000605375 395 ntBASIC0.41□□□□□ -2.34
RFC3P40938 RNU6-94P-201ENST00000607728 107 ntBASIC0.41□□□□□ -2.34
RFC3P40938 AF250324.2-201ENST00000608299 610 ntBASIC0.41□□□□□ -2.34
RFC3P40938 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC0.41□□□□□ -2.34
RFC3P40938 Y_RNA.301-201ENST00000364990 103 ntBASIC0.4□□□□□ -2.35
RFC3P40938 MIR181A1-201ENST00000385026 110 ntBASIC0.4□□□□□ -2.35
RFC3P40938 AC244098.3-201ENST00000424803 96 ntBASIC0.4□□□□□ -2.35
RFC3P40938 U8.22-201ENST00000459141 133 ntBASIC0.4□□□□□ -2.35
RFC3P40938 RNU6-1337P-201ENST00000516525 95 ntBASIC0.4□□□□□ -2.35
RFC3P40938 AF235103.2-201ENST00000525753 346 ntBASIC0.4□□□□□ -2.35
RFC3P40938 AC243829.6-201ENST00000612652 106 ntBASIC0.4□□□□□ -2.35
RFC3P40938 Y_RNA.157-201ENST00000363638 102 ntBASIC0.39□□□□□ -2.35
RFC3P40938 SNORD115-30-201ENST00000364117 82 ntBASIC0.39□□□□□ -2.35
RFC3P40938 Y_RNA.559-201ENST00000384686 107 ntBASIC0.39□□□□□ -2.35
RFC3P40938 RNU6-1237P-201ENST00000384777 107 ntBASIC0.39□□□□□ -2.35
RFC3P40938 MIR522-201ENST00000385071 87 ntBASIC0.39□□□□□ -2.35
RFC3P40938 MIR1827-201ENST00000408549 66 ntBASIC0.39□□□□□ -2.35
RFC3P40938 RNA5SP118-201ENST00000410385 109 ntBASIC0.39□□□□□ -2.35
RFC3P40938 SNORA18.7-201ENST00000516910 131 ntBASIC0.39□□□□□ -2.35
RFC3P40938 RNU2-12P-201ENST00000517216 168 ntBASIC0.39□□□□□ -2.35
RFC3P40938 MIR1273G-201ENST00000577677 100 ntBASIC0.39□□□□□ -2.35
RFC3P40938 MIR4790-201ENST00000577799 79 ntBASIC0.39□□□□□ -2.35
RFC3P40938 Z83818.1-201ENST00000603584 150 ntBASIC0.39□□□□□ -2.35
RFC3P40938 RNY4P14-201ENST00000363656 96 ntBASIC0.38□□□□□ -2.35
RFC3P40938 SNORD113.3-201ENST00000364630 78 ntBASIC0.38□□□□□ -2.35
RFC3P40938 Y_RNA.358-201ENST00000365491 99 ntBASIC0.38□□□□□ -2.35
RFC3P40938 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
RFC3P40938 RNU6-994P-201ENST00000410507 111 ntBASIC0.38□□□□□ -2.35
RFC3P40938 AC074085.1-201ENST00000413598 418 ntBASIC0.38□□□□□ -2.35
RFC3P40938 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.38□□□□□ -2.35
RFC3P40938 AL392103.1-201ENST00000447000 198 ntBASIC0.38□□□□□ -2.35
RFC3P40938 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.38□□□□□ -2.35
RFC3P40938 AC026782.1-201ENST00000512952 449 ntBASIC0.38□□□□□ -2.35
RFC3P40938 AC022616.4-201ENST00000522985 181 ntBASIC0.38□□□□□ -2.35
RFC3P40938 AC011195.1-201ENST00000578177 177 ntBASIC0.38□□□□□ -2.35
RFC3P40938 AC010487.4-201ENST00000637027 61 ntBASIC0.38□□□□□ -2.35
RFC3P40938 AC100810.6-201ENST00000638068 285 ntBASIC0.38□□□□□ -2.35
RFC3P40938 Y_RNA.253-201ENST00000364562 112 ntBASIC0.37□□□□□ -2.35
RFC3P40938 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.37□□□□□ -2.35
RFC3P40938 SNORD123-201ENST00000459473 70 ntBASIC0.37□□□□□ -2.35
RFC3P40938 MTND5P5-201ENST00000503764 376 ntBASIC0.37□□□□□ -2.35
RFC3P40938 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC0.37□□□□□ -2.35
RFC3P40938 RN7SKP12-201ENST00000516275 143 ntBASIC0.37□□□□□ -2.35
RFC3P40938 SNORD45.4-201ENST00000516629 73 ntBASIC0.37□□□□□ -2.35
RFC3P40938 AC245505.1-201ENST00000556398 224 ntBASIC0.37□□□□□ -2.35
RFC3P40938 AL589743.1-201ENST00000551932 2712 ntBASIC0.36□□□□□ -2.35
RFC3P40938 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.36□□□□□ -2.35
RFC3P40938 Y_RNA.9-201ENST00000362354 101 ntBASIC0.36□□□□□ -2.35
RFC3P40938 Y_RNA.41-201ENST00000362646 102 ntBASIC0.36□□□□□ -2.35
RFC3P40938 RNU6-593P-201ENST00000364716 112 ntBASIC0.36□□□□□ -2.35
RFC3P40938 SNORD105-201ENST00000386910 85 ntBASIC0.36□□□□□ -2.35
RFC3P40938 MIR1302-7-201ENST00000408841 72 ntBASIC0.36□□□□□ -2.35
RFC3P40938 RNU2-70P-201ENST00000410718 179 ntBASIC0.36□□□□□ -2.35
RFC3P40938 RNU6-1304P-201ENST00000411374 106 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 201.3 ms