Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 AC008739.2-201ENST00000597006 317 ntBASIC3.04□□□□□ -1.92
SYN1P17600 AL356575.1-201ENST00000603008 283 ntBASIC3.04□□□□□ -1.92
SYN1P17600 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SYN1P17600 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
SYN1P17600 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.03□□□□□ -1.92
SYN1P17600 AC108206.1-201ENST00000570186 4159 ntBASIC3.03□□□□□ -1.92
SYN1P17600 RNU4-15P-201ENST00000362613 141 ntBASIC3.03□□□□□ -1.92
SYN1P17600 Y_RNA.52-201ENST00000362760 96 ntBASIC3.03□□□□□ -1.92
SYN1P17600 RNA5SP383-201ENST00000362934 120 ntBASIC3.03□□□□□ -1.92
SYN1P17600 Y_RNA.91-201ENST00000363042 107 ntBASIC3.03□□□□□ -1.92
SYN1P17600 RNU6-486P-201ENST00000363116 107 ntBASIC3.03□□□□□ -1.92
SYN1P17600 RNU6-820P-201ENST00000384273 107 ntBASIC3.03□□□□□ -1.92
SYN1P17600 Y_RNA.466-201ENST00000384294 113 ntBASIC3.03□□□□□ -1.92
SYN1P17600 MIR590-201ENST00000385008 97 ntBASIC3.03□□□□□ -1.92
SYN1P17600 AL590004.2-201ENST00000404787 371 ntBASIC3.03□□□□□ -1.92
SYN1P17600 MIR1302-5-201ENST00000408164 150 ntBASIC3.03□□□□□ -1.92
SYN1P17600 RN7SKP192-201ENST00000411291 327 ntBASIC3.03□□□□□ -1.92
SYN1P17600 AC008134.1-201ENST00000420943 193 ntBASIC3.03□□□□□ -1.92
SYN1P17600 SEM1P1-201ENST00000506694 209 ntBASIC3.03□□□□□ -1.92
SYN1P17600 snoMBII-202.2-201ENST00000517263 86 ntBASIC3.03□□□□□ -1.92
SYN1P17600 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
SYN1P17600 AC092435.3-201ENST00000565538 3654 ntBASIC3.03□□□□□ -1.93
SYN1P17600 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
SYN1P17600 AC026241.1-201ENST00000517873 2142 ntBASIC3.02□□□□□ -1.93
SYN1P17600 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
SYN1P17600 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.02□□□□□ -1.93
SYN1P17600 SNORD56.3-201ENST00000363507 71 ntBASIC3.02□□□□□ -1.93
SYN1P17600 Y_RNA.164-201ENST00000363709 102 ntBASIC3.02□□□□□ -1.93
SYN1P17600 SNORA68.1-201ENST00000364537 132 ntBASIC3.02□□□□□ -1.93
SYN1P17600 SNORA51.4-201ENST00000364993 124 ntBASIC3.02□□□□□ -1.93
SYN1P17600 SNORD18B-201ENST00000365659 72 ntBASIC3.02□□□□□ -1.93
SYN1P17600 RNU6-1124P-201ENST00000384169 107 ntBASIC3.02□□□□□ -1.93
SYN1P17600 Y_RNA.528-201ENST00000384575 108 ntBASIC3.02□□□□□ -1.93
SYN1P17600 SNORA79-201ENST00000408376 140 ntBASIC3.02□□□□□ -1.93
SYN1P17600 RPL39P40-201ENST00000445481 146 ntBASIC3.02□□□□□ -1.93
SYN1P17600 RPS29P12-201ENST00000460178 152 ntBASIC3.02□□□□□ -1.93
SYN1P17600 RNU6-521P-201ENST00000516663 105 ntBASIC3.02□□□□□ -1.93
SYN1P17600 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.02□□□□□ -1.93
SYN1P17600 AC015720.1-201ENST00000565251 277 ntBASIC3.02□□□□□ -1.93
SYN1P17600 AC103810.1-201ENST00000579873 453 ntBASIC3.02□□□□□ -1.93
SYN1P17600 MIR4648-201ENST00000580107 72 ntBASIC3.02□□□□□ -1.93
SYN1P17600 AL021707.8-201ENST00000609428 183 ntBASIC3.02□□□□□ -1.93
SYN1P17600 PCGEM1.1-201ENST00000613431 131 ntBASIC3.02□□□□□ -1.93
SYN1P17600 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
SYN1P17600 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
SYN1P17600 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.01□□□□□ -1.93
SYN1P17600 RNU4-53P-201ENST00000410828 140 ntBASIC3.01□□□□□ -1.93
SYN1P17600 RN7SKP101-201ENST00000411376 320 ntBASIC3.01□□□□□ -1.93
SYN1P17600 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.01□□□□□ -1.93
SYN1P17600 RN7SL499P-201ENST00000481141 276 ntBASIC3.01□□□□□ -1.93
SYN1P17600 RNU6-970P-201ENST00000516312 107 ntBASIC3.01□□□□□ -1.93
SYN1P17600 RNA5SP281-201ENST00000516504 135 ntBASIC3.01□□□□□ -1.93
SYN1P17600 AL049861.1-201ENST00000603130 150 ntBASIC3.01□□□□□ -1.93
SYN1P17600 SNRPGP20-201ENST00000604477 205 ntBASIC3.01□□□□□ -1.93
SYN1P17600 AC068205.3-201ENST00000636385 468 ntBASIC3.01□□□□□ -1.93
SYN1P17600 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
SYN1P17600 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3□□□□□ -1.93
SYN1P17600 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3□□□□□ -1.93
SYN1P17600 AC080128.1-201ENST00000474389 1917 ntBASIC3□□□□□ -1.93
SYN1P17600 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC3□□□□□ -1.93
SYN1P17600 Y_RNA.220-201ENST00000364244 109 ntBASIC3□□□□□ -1.93
SYN1P17600 Y_RNA.432-201ENST00000384087 111 ntBASIC3□□□□□ -1.93
SYN1P17600 5S_rRNA.2-201ENST00000391293 112 ntBASIC3□□□□□ -1.93
SYN1P17600 MIR1255A-201ENST00000408338 113 ntBASIC3□□□□□ -1.93
SYN1P17600 RNA5SP425-201ENST00000410336 112 ntBASIC3□□□□□ -1.93
SYN1P17600 RNU6-1328P-201ENST00000410938 106 ntBASIC3□□□□□ -1.93
SYN1P17600 RPS3AP1-201ENST00000413190 320 ntBASIC3□□□□□ -1.93
SYN1P17600 EIF4A1P12-201ENST00000551910 141 ntBASIC3□□□□□ -1.93
SYN1P17600 SNORD11B-201ENST00000607707 90 ntBASIC3□□□□□ -1.93
SYN1P17600 MALAT1.1-201ENST00000618249 95 ntBASIC3□□□□□ -1.93
SYN1P17600 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC3□□□□□ -1.93
SYN1P17600 CTSLP2-204ENST00000629029 392 ntBASIC3□□□□□ -1.93
SYN1P17600 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3□□□□□ -1.93
SYN1P17600 Y_RNA.107-201ENST00000363190 121 ntBASIC2.99□□□□□ -1.93
SYN1P17600 SNORA63.5-201ENST00000363548 123 ntBASIC2.99□□□□□ -1.93
SYN1P17600 SNORD56.5-201ENST00000364281 72 ntBASIC2.99□□□□□ -1.93
SYN1P17600 SNORA67.2-201ENST00000384300 149 ntBASIC2.99□□□□□ -1.93
SYN1P17600 Y_RNA.593-201ENST00000410292 98 ntBASIC2.99□□□□□ -1.93
SYN1P17600 AC027124.2-201ENST00000428249 105 ntBASIC2.99□□□□□ -1.93
SYN1P17600 HMGN2P3-201ENST00000433603 273 ntBASIC2.99□□□□□ -1.93
SYN1P17600 AC244505.4-201ENST00000434905 287 ntBASIC2.99□□□□□ -1.93
SYN1P17600 HMGN2P5-201ENST00000436882 273 ntBASIC2.99□□□□□ -1.93
SYN1P17600 SSXP5-201ENST00000443473 287 ntBASIC2.99□□□□□ -1.93
SYN1P17600 RNU6-1146P-201ENST00000516282 102 ntBASIC2.99□□□□□ -1.93
SYN1P17600 RNU6-344P-201ENST00000516635 111 ntBASIC2.99□□□□□ -1.93
SYN1P17600 RNU6-365P-201ENST00000517113 106 ntBASIC2.99□□□□□ -1.93
SYN1P17600 AP003357.1-201ENST00000604497 148 ntBASIC2.99□□□□□ -1.93
SYN1P17600 MIR7157-201ENST00000635801 60 ntBASIC2.99□□□□□ -1.93
SYN1P17600 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.98□□□□□ -1.93
SYN1P17600 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SYN1P17600 Y_RNA.323-201ENST00000365157 109 ntBASIC2.98□□□□□ -1.93
SYN1P17600 Y_RNA.544-201ENST00000384650 113 ntBASIC2.98□□□□□ -1.93
SYN1P17600 MIR570-201ENST00000384917 97 ntBASIC2.98□□□□□ -1.93
SYN1P17600 MIR891A-201ENST00000401237 79 ntBASIC2.98□□□□□ -1.93
SYN1P17600 RNA5SP274-201ENST00000410484 108 ntBASIC2.98□□□□□ -1.93
SYN1P17600 TOMM22P2-201ENST00000430735 237 ntBASIC2.98□□□□□ -1.93
SYN1P17600 AL021397.1-201ENST00000451806 248 ntBASIC2.98□□□□□ -1.93
SYN1P17600 RNU6-1337P-201ENST00000516525 95 ntBASIC2.98□□□□□ -1.93
SYN1P17600 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.98□□□□□ -1.93
SYN1P17600 SNORD115-40-201ENST00000606510 82 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 271.4 ms