Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC4.6□□□□□ -1.67
CHGAP10645 AL035470.1-201ENST00000622571 220 ntBASIC4.6□□□□□ -1.67
CHGAP10645 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHGAP10645 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CHGAP10645 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CHGAP10645 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHGAP10645 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CHGAP10645 SNORD68-201ENST00000363214 84 ntBASIC4.59□□□□□ -1.67
CHGAP10645 SNORA63.5-201ENST00000363548 123 ntBASIC4.59□□□□□ -1.67
CHGAP10645 RNU6-640P-201ENST00000363693 105 ntBASIC4.59□□□□□ -1.67
CHGAP10645 SNORD114-6-201ENST00000364393 72 ntBASIC4.59□□□□□ -1.67
CHGAP10645 RNU6-690P-201ENST00000365242 106 ntBASIC4.59□□□□□ -1.67
CHGAP10645 SNORA25B-201ENST00000365507 128 ntBASIC4.59□□□□□ -1.67
CHGAP10645 SNORA7.4-201ENST00000384249 137 ntBASIC4.59□□□□□ -1.67
CHGAP10645 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CHGAP10645 RNU6-220P-201ENST00000390919 107 ntBASIC4.59□□□□□ -1.67
CHGAP10645 AC022018.1-201ENST00000430685 241 ntBASIC4.59□□□□□ -1.67
CHGAP10645 HMGN2P32-201ENST00000444648 269 ntBASIC4.59□□□□□ -1.67
CHGAP10645 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC4.59□□□□□ -1.67
CHGAP10645 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC4.59□□□□□ -1.67
CHGAP10645 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC4.59□□□□□ -1.67
CHGAP10645 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CHGAP10645 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
CHGAP10645 U6.98-201ENST00000637157 84 ntBASIC4.59□□□□□ -1.67
CHGAP10645 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.59□□□□□ -1.68
CHGAP10645 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC4.58□□□□□ -1.68
CHGAP10645 RNA5SP322-201ENST00000363617 119 ntBASIC4.58□□□□□ -1.68
CHGAP10645 SNORA33-201ENST00000363664 130 ntBASIC4.58□□□□□ -1.68
CHGAP10645 SNORD115-28-201ENST00000363931 81 ntBASIC4.58□□□□□ -1.68
CHGAP10645 SNORA71.1-201ENST00000364523 117 ntBASIC4.58□□□□□ -1.68
CHGAP10645 snoU2-30.1-201ENST00000365012 70 ntBASIC4.58□□□□□ -1.68
CHGAP10645 RNU6-160P-201ENST00000384591 107 ntBASIC4.58□□□□□ -1.68
CHGAP10645 MIR181B1-201ENST00000385240 110 ntBASIC4.58□□□□□ -1.68
CHGAP10645 AC010401.1-201ENST00000463867 348 ntBASIC4.58□□□□□ -1.68
CHGAP10645 RNU7-70P-201ENST00000516941 66 ntBASIC4.58□□□□□ -1.68
CHGAP10645 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC4.58□□□□□ -1.68
CHGAP10645 AL360157.1-201ENST00000565962 87 ntBASIC4.58□□□□□ -1.68
CHGAP10645 MIR3945-201ENST00000581853 98 ntBASIC4.58□□□□□ -1.68
CHGAP10645 uc_338.25-201ENST00000613756 156 ntBASIC4.58□□□□□ -1.68
CHGAP10645 AC017071.1-201ENST00000564407 2204 ntBASIC4.58□□□□□ -1.68
CHGAP10645 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
CHGAP10645 MIR449A-201ENST00000362113 91 ntBASIC4.57□□□□□ -1.68
CHGAP10645 RNU6-1084P-201ENST00000362498 107 ntBASIC4.57□□□□□ -1.68
CHGAP10645 SNORA54-201ENST00000384281 123 ntBASIC4.57□□□□□ -1.68
CHGAP10645 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC4.57□□□□□ -1.68
CHGAP10645 AL163195.1-201ENST00000496941 348 ntBASIC4.57□□□□□ -1.68
CHGAP10645 AC007536.1-201ENST00000533382 349 ntBASIC4.57□□□□□ -1.68
CHGAP10645 MIR3616-201ENST00000584070 92 ntBASIC4.57□□□□□ -1.68
CHGAP10645 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CHGAP10645 RNU6-349P-201ENST00000362402 107 ntBASIC4.56□□□□□ -1.68
CHGAP10645 Y_RNA.37-201ENST00000362606 108 ntBASIC4.56□□□□□ -1.68
CHGAP10645 RNA5SP229-201ENST00000410809 99 ntBASIC4.56□□□□□ -1.68
CHGAP10645 SNORA40.13-201ENST00000516379 120 ntBASIC4.56□□□□□ -1.68
CHGAP10645 RNU7-25P-201ENST00000516544 62 ntBASIC4.56□□□□□ -1.68
CHGAP10645 RNY4P20-201ENST00000516678 93 ntBASIC4.56□□□□□ -1.68
CHGAP10645 AC110741.2-201ENST00000605278 268 ntBASIC4.56□□□□□ -1.68
CHGAP10645 CTSLP2-204ENST00000629029 392 ntBASIC4.56□□□□□ -1.68
CHGAP10645 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CHGAP10645 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CHGAP10645 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.55□□□□□ -1.68
CHGAP10645 RNU6-268P-201ENST00000364174 107 ntBASIC4.55□□□□□ -1.68
CHGAP10645 Y_RNA.336-201ENST00000365307 109 ntBASIC4.55□□□□□ -1.68
CHGAP10645 Y_RNA.362-201ENST00000365518 110 ntBASIC4.55□□□□□ -1.68
CHGAP10645 RNU1-89P-201ENST00000384592 164 ntBASIC4.55□□□□□ -1.68
CHGAP10645 Y_RNA.544-201ENST00000384650 113 ntBASIC4.55□□□□□ -1.68
CHGAP10645 Y_RNA.547-201ENST00000384654 119 ntBASIC4.55□□□□□ -1.68
CHGAP10645 SNORA26.7-201ENST00000391288 122 ntBASIC4.55□□□□□ -1.68
CHGAP10645 IGKV3-31-201ENST00000523109 329 ntBASIC4.55□□□□□ -1.68
CHGAP10645 MIR4738-201ENST00000579134 87 ntBASIC4.55□□□□□ -1.68
CHGAP10645 Clostridiales-1.3-201ENST00000637703 147 ntBASIC4.55□□□□□ -1.68
CHGAP10645 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CHGAP10645 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CHGAP10645 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.54□□□□□ -1.68
CHGAP10645 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CHGAP10645 SNORD21-201ENST00000383953 95 ntBASIC4.54□□□□□ -1.68
CHGAP10645 SNORD67-201ENST00000390833 111 ntBASIC4.54□□□□□ -1.68
CHGAP10645 EEF1A1P41-201ENST00000414667 207 ntBASIC4.54□□□□□ -1.68
CHGAP10645 SNRPGP14-201ENST00000435400 219 ntBASIC4.54□□□□□ -1.68
CHGAP10645 MIR2114-201ENST00000516645 80 ntBASIC4.54□□□□□ -1.68
CHGAP10645 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.54□□□□□ -1.68
CHGAP10645 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CHGAP10645 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.54□□□□□ -1.68
CHGAP10645 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CHGAP10645 RNU6-414P-201ENST00000363705 104 ntBASIC4.53□□□□□ -1.68
CHGAP10645 U8.6-201ENST00000364939 135 ntBASIC4.53□□□□□ -1.68
CHGAP10645 AL445646.1-201ENST00000431784 216 ntBASIC4.53□□□□□ -1.68
CHGAP10645 CST9LP2-201ENST00000437612 320 ntBASIC4.53□□□□□ -1.68
CHGAP10645 RNU6-844P-201ENST00000517175 102 ntBASIC4.53□□□□□ -1.68
CHGAP10645 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC4.53□□□□□ -1.68
CHGAP10645 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC4.53□□□□□ -1.68
CHGAP10645 AC021443.1-201ENST00000604478 211 ntBASIC4.53□□□□□ -1.68
CHGAP10645 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CHGAP10645 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
CHGAP10645 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
CHGAP10645 AC009487.2-201ENST00000420969 6821 ntBASIC4.52□□□□□ -1.69
CHGAP10645 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
CHGAP10645 RNU1-133P-201ENST00000364867 167 ntBASIC4.52□□□□□ -1.69
CHGAP10645 RNY1P6-201ENST00000384193 109 ntBASIC4.52□□□□□ -1.69
CHGAP10645 RNU6-1072P-201ENST00000384703 107 ntBASIC4.52□□□□□ -1.69
CHGAP10645 SNORD15B-201ENST00000384714 146 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 227.3 ms