Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.22□□□□□ -2.05
SNHG28P0DPA3 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
SNHG28P0DPA3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.22□□□□□ -2.05
SNHG28P0DPA3 Y_RNA.273-201ENST00000364703 102 ntBASIC2.21□□□□□ -2.06
SNHG28P0DPA3 RNU6-1325P-201ENST00000364905 105 ntBASIC2.21□□□□□ -2.06
SNHG28P0DPA3 SNORD14D-201ENST00000384390 87 ntBASIC2.21□□□□□ -2.06
SNHG28P0DPA3 RNU1-57P-201ENST00000384491 166 ntBASIC2.21□□□□□ -2.06
SNHG28P0DPA3 MIR15B-201ENST00000385045 98 ntBASIC2.21□□□□□ -2.06
SNHG28P0DPA3 SNORA40.19-201ENST00000390846 128 ntBASIC2.21□□□□□ -2.06
SNHG28P0DPA3 AC019129.1-201ENST00000403786 261 ntBASIC2.21□□□□□ -2.06
SNHG28P0DPA3 AC009414.1-201ENST00000427200 443 ntBASIC2.21□□□□□ -2.06
SNHG28P0DPA3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.21□□□□□ -2.06
SNHG28P0DPA3 SNRPGP8-201ENST00000454064 226 ntBASIC2.21□□□□□ -2.06
SNHG28P0DPA3 ATP5EP1-201ENST00000510257 156 ntBASIC2.21□□□□□ -2.06
SNHG28P0DPA3 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.21□□□□□ -2.06
SNHG28P0DPA3 RNU6-659P-201ENST00000516454 104 ntBASIC2.21□□□□□ -2.06
SNHG28P0DPA3 RNU6-1337P-201ENST00000516525 95 ntBASIC2.21□□□□□ -2.06
SNHG28P0DPA3 RNU6-295P-201ENST00000516901 104 ntBASIC2.21□□□□□ -2.06
SNHG28P0DPA3 AL031274.2-201ENST00000599419 203 ntBASIC2.21□□□□□ -2.06
SNHG28P0DPA3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.21□□□□□ -2.06
SNHG28P0DPA3 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
SNHG28P0DPA3 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SNHG28P0DPA3 RNU6-1205P-201ENST00000363625 106 ntBASIC2.2□□□□□ -2.06
SNHG28P0DPA3 RNU6-944P-201ENST00000364023 107 ntBASIC2.2□□□□□ -2.06
SNHG28P0DPA3 RNU6-153P-201ENST00000364422 104 ntBASIC2.2□□□□□ -2.06
SNHG28P0DPA3 RNU6-643P-201ENST00000384018 107 ntBASIC2.2□□□□□ -2.06
SNHG28P0DPA3 SNORA20B-201ENST00000384220 132 ntBASIC2.2□□□□□ -2.06
SNHG28P0DPA3 MIR524-201ENST00000385242 87 ntBASIC2.2□□□□□ -2.06
SNHG28P0DPA3 MIR147B-201ENST00000390185 80 ntBASIC2.2□□□□□ -2.06
SNHG28P0DPA3 MIR320B2-201ENST00000408479 138 ntBASIC2.2□□□□□ -2.06
SNHG28P0DPA3 RNA5SP338-201ENST00000410495 85 ntBASIC2.2□□□□□ -2.06
SNHG28P0DPA3 EIF4EP4-201ENST00000424916 578 ntBASIC2.2□□□□□ -2.06
SNHG28P0DPA3 AL591806.2-201ENST00000433122 173 ntBASIC2.2□□□□□ -2.06
SNHG28P0DPA3 AC016717.1-201ENST00000448918 286 ntBASIC2.2□□□□□ -2.06
SNHG28P0DPA3 AC090255.1-201ENST00000495779 349 ntBASIC2.2□□□□□ -2.06
SNHG28P0DPA3 RNU4-57P-201ENST00000515980 135 ntBASIC2.2□□□□□ -2.06
SNHG28P0DPA3 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.2□□□□□ -2.06
SNHG28P0DPA3 RNU7-115P-201ENST00000516433 55 ntBASIC2.2□□□□□ -2.06
SNHG28P0DPA3 RNU6-63P-201ENST00000516690 95 ntBASIC2.2□□□□□ -2.06
SNHG28P0DPA3 IGLV3-17-201ENST00000519099 244 ntBASIC2.2□□□□□ -2.06
SNHG28P0DPA3 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.2□□□□□ -2.06
SNHG28P0DPA3 AC002984.1-201ENST00000591692 448 ntBASIC2.2□□□□□ -2.06
SNHG28P0DPA3 AL391903.3-201ENST00000612158 163 ntBASIC2.2□□□□□ -2.06
SNHG28P0DPA3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.2□□□□□ -2.06
SNHG28P0DPA3 AC110079.1-202ENST00000635213 138 ntBASIC2.2□□□□□ -2.06
SNHG28P0DPA3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SNHG28P0DPA3 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
SNHG28P0DPA3 Y_RNA.337-201ENST00000365312 102 ntBASIC2.19□□□□□ -2.06
SNHG28P0DPA3 MIR513C-201ENST00000401352 84 ntBASIC2.19□□□□□ -2.06
SNHG28P0DPA3 SNORA36B-201ENST00000410438 131 ntBASIC2.19□□□□□ -2.06
SNHG28P0DPA3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.19□□□□□ -2.06
SNHG28P0DPA3 RPL36AP48-201ENST00000485521 314 ntBASIC2.19□□□□□ -2.06
SNHG28P0DPA3 RNU1-40P-201ENST00000516816 164 ntBASIC2.19□□□□□ -2.06
SNHG28P0DPA3 RNU1-97P-201ENST00000516872 164 ntBASIC2.19□□□□□ -2.06
SNHG28P0DPA3 AC121758.2-201ENST00000553271 193 ntBASIC2.19□□□□□ -2.06
SNHG28P0DPA3 AC068647.2-201ENST00000637380 353 ntBASIC2.19□□□□□ -2.06
SNHG28P0DPA3 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.19□□□□□ -2.06
SNHG28P0DPA3 SNORA63.4-201ENST00000362763 126 ntBASIC2.18□□□□□ -2.06
SNHG28P0DPA3 RNU6-508P-201ENST00000363231 103 ntBASIC2.18□□□□□ -2.06
SNHG28P0DPA3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.18□□□□□ -2.06
SNHG28P0DPA3 RNU6-80P-201ENST00000384195 107 ntBASIC2.18□□□□□ -2.06
SNHG28P0DPA3 MIR586-201ENST00000385035 97 ntBASIC2.18□□□□□ -2.06
SNHG28P0DPA3 MIR9-3-201ENST00000385084 90 ntBASIC2.18□□□□□ -2.06
SNHG28P0DPA3 RNU6-1228P-201ENST00000391014 107 ntBASIC2.18□□□□□ -2.06
SNHG28P0DPA3 RNU6-710P-201ENST00000410424 105 ntBASIC2.18□□□□□ -2.06
SNHG28P0DPA3 RNU6-1328P-201ENST00000410938 106 ntBASIC2.18□□□□□ -2.06
SNHG28P0DPA3 Y_RNA.622-201ENST00000411091 108 ntBASIC2.18□□□□□ -2.06
SNHG28P0DPA3 AC003989.2-201ENST00000440224 169 ntBASIC2.18□□□□□ -2.06
SNHG28P0DPA3 SNORD65B-201ENST00000459126 73 ntBASIC2.18□□□□□ -2.06
SNHG28P0DPA3 RPL23AP42-201ENST00000471152 471 ntBASIC2.18□□□□□ -2.06
SNHG28P0DPA3 RPS29P11-201ENST00000496507 171 ntBASIC2.18□□□□□ -2.06
SNHG28P0DPA3 RNU6-919P-201ENST00000516731 104 ntBASIC2.18□□□□□ -2.06
SNHG28P0DPA3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.18□□□□□ -2.06
SNHG28P0DPA3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.18□□□□□ -2.06
SNHG28P0DPA3 MIR6895-201ENST00000613497 78 ntBASIC2.18□□□□□ -2.06
SNHG28P0DPA3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.18□□□□□ -2.06
SNHG28P0DPA3 MIR548AY-201ENST00000617669 107 ntBASIC2.18□□□□□ -2.06
SNHG28P0DPA3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
SNHG28P0DPA3 AP000553.5-201ENST00000641933 54 ntBASIC2.18□□□□□ -2.06
SNHG28P0DPA3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.18□□□□□ -2.06
SNHG28P0DPA3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
SNHG28P0DPA3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
SNHG28P0DPA3 MIR583-201ENST00000384846 75 ntBASIC2.17□□□□□ -2.06
SNHG28P0DPA3 AC016909.1-201ENST00000415916 166 ntBASIC2.17□□□□□ -2.06
SNHG28P0DPA3 HSPE1P21-201ENST00000438283 308 ntBASIC2.17□□□□□ -2.06
SNHG28P0DPA3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.17□□□□□ -2.06
SNHG28P0DPA3 SCARNA17.1-201ENST00000516211 143 ntBASIC2.17□□□□□ -2.06
SNHG28P0DPA3 SCARNA17.2-201ENST00000516334 143 ntBASIC2.17□□□□□ -2.06
SNHG28P0DPA3 RNU2-56P-201ENST00000516826 190 ntBASIC2.17□□□□□ -2.06
SNHG28P0DPA3 AC027419.1-201ENST00000522976 328 ntBASIC2.17□□□□□ -2.06
SNHG28P0DPA3 MIR4724-201ENST00000579485 89 ntBASIC2.17□□□□□ -2.06
SNHG28P0DPA3 MIR3124-201ENST00000582636 67 ntBASIC2.17□□□□□ -2.06
SNHG28P0DPA3 RPL30P11-203ENST00000598995 310 ntBASIC2.17□□□□□ -2.06
SNHG28P0DPA3 AL359881.1-201ENST00000602916 267 ntBASIC2.17□□□□□ -2.06
SNHG28P0DPA3 AC120024.3-201ENST00000603167 156 ntBASIC2.17□□□□□ -2.06
SNHG28P0DPA3 SCARNA17.4-201ENST00000614296 143 ntBASIC2.17□□□□□ -2.06
SNHG28P0DPA3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.17□□□□□ -2.06
SNHG28P0DPA3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
SNHG28P0DPA3 RNU6-1298P-201ENST00000362456 101 ntBASIC2.16□□□□□ -2.06
SNHG28P0DPA3 SNORA27.1-201ENST00000362604 124 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms