Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC008269.2-201ENST00000561915 1105 ntBASIC1.23□□□□□ -2.21
ATG4BQ9Y4P1 MIR4778-201ENST00000577635 80 ntBASIC1.23□□□□□ -2.21
ATG4BQ9Y4P1 AC092447.9-201ENST00000603395 144 ntBASIC1.23□□□□□ -2.21
ATG4BQ9Y4P1 AC005828.6-201ENST00000606610 232 ntBASIC1.23□□□□□ -2.21
ATG4BQ9Y4P1 AL157834.3-201ENST00000615543 103 ntBASIC1.23□□□□□ -2.21
ATG4BQ9Y4P1 AC073349.3-201ENST00000617616 186 ntBASIC1.23□□□□□ -2.21
ATG4BQ9Y4P1 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.23□□□□□ -2.21
ATG4BQ9Y4P1 MIR4272-201ENST00000635924 64 ntBASIC1.23□□□□□ -2.21
ATG4BQ9Y4P1 RNU6-1115P-201ENST00000362490 106 ntBASIC1.22□□□□□ -2.21
ATG4BQ9Y4P1 SNORD114-7-201ENST00000362520 77 ntBASIC1.22□□□□□ -2.21
ATG4BQ9Y4P1 SNORA1B-201ENST00000362535 133 ntBASIC1.22□□□□□ -2.21
ATG4BQ9Y4P1 RNU6-505P-201ENST00000384427 107 ntBASIC1.22□□□□□ -2.21
ATG4BQ9Y4P1 Y_RNA.496-201ENST00000384444 101 ntBASIC1.22□□□□□ -2.21
ATG4BQ9Y4P1 Y_RNA.579-201ENST00000390939 94 ntBASIC1.22□□□□□ -2.21
ATG4BQ9Y4P1 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.22□□□□□ -2.21
ATG4BQ9Y4P1 RNU6-155P-201ENST00000516347 100 ntBASIC1.22□□□□□ -2.21
ATG4BQ9Y4P1 RNU6-341P-201ENST00000516973 96 ntBASIC1.22□□□□□ -2.21
ATG4BQ9Y4P1 AP001094.1-201ENST00000579805 193 ntBASIC1.22□□□□□ -2.21
ATG4BQ9Y4P1 AC091178.2-201ENST00000584401 117 ntBASIC1.22□□□□□ -2.21
ATG4BQ9Y4P1 AC240442.1-201ENST00000616055 283 ntBASIC1.22□□□□□ -2.21
ATG4BQ9Y4P1 AL353770.2-201ENST00000620024 78 ntBASIC1.22□□□□□ -2.21
ATG4BQ9Y4P1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
ATG4BQ9Y4P1 Y_RNA.4-201ENST00000362333 112 ntBASIC1.21□□□□□ -2.22
ATG4BQ9Y4P1 Y_RNA.39-201ENST00000362620 98 ntBASIC1.21□□□□□ -2.22
ATG4BQ9Y4P1 Y_RNA.327-201ENST00000365201 102 ntBASIC1.21□□□□□ -2.22
ATG4BQ9Y4P1 MT-TD-201ENST00000387419 68 ntBASIC1.21□□□□□ -2.22
ATG4BQ9Y4P1 SNORA40.6-201ENST00000391153 128 ntBASIC1.21□□□□□ -2.22
ATG4BQ9Y4P1 AL031003.1-201ENST00000404229 172 ntBASIC1.21□□□□□ -2.22
ATG4BQ9Y4P1 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.21□□□□□ -2.22
ATG4BQ9Y4P1 AF228730.4-201ENST00000421457 183 ntBASIC1.21□□□□□ -2.22
ATG4BQ9Y4P1 MTND4LP11-201ENST00000422184 280 ntBASIC1.21□□□□□ -2.22
ATG4BQ9Y4P1 RNU7-28P-201ENST00000516759 62 ntBASIC1.21□□□□□ -2.22
ATG4BQ9Y4P1 RNU6-1096P-201ENST00000517089 102 ntBASIC1.21□□□□□ -2.22
ATG4BQ9Y4P1 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.21□□□□□ -2.22
ATG4BQ9Y4P1 MIR3660-201ENST00000584845 100 ntBASIC1.21□□□□□ -2.22
ATG4BQ9Y4P1 AC005592.1-201ENST00000566527 1640 ntBASIC1.21□□□□□ -2.22
ATG4BQ9Y4P1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
ATG4BQ9Y4P1 RNU6-117P-201ENST00000365415 107 ntBASIC1.2□□□□□ -2.22
ATG4BQ9Y4P1 Y_RNA.446-201ENST00000384178 104 ntBASIC1.2□□□□□ -2.22
ATG4BQ9Y4P1 RNU2-54P-201ENST00000410299 190 ntBASIC1.2□□□□□ -2.22
ATG4BQ9Y4P1 RNA5SP511-201ENST00000410487 115 ntBASIC1.2□□□□□ -2.22
ATG4BQ9Y4P1 Y_RNA.621-201ENST00000411065 96 ntBASIC1.2□□□□□ -2.22
ATG4BQ9Y4P1 CALM2P4-201ENST00000430810 426 ntBASIC1.2□□□□□ -2.22
ATG4BQ9Y4P1 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC1.2□□□□□ -2.22
ATG4BQ9Y4P1 MTATP6P23-201ENST00000440153 476 ntBASIC1.2□□□□□ -2.22
ATG4BQ9Y4P1 RPEP5-201ENST00000441137 268 ntBASIC1.2□□□□□ -2.22
ATG4BQ9Y4P1 SNORA70.12-201ENST00000516084 153 ntBASIC1.2□□□□□ -2.22
ATG4BQ9Y4P1 RNU6-1337P-201ENST00000516525 95 ntBASIC1.2□□□□□ -2.22
ATG4BQ9Y4P1 AP002004.2-201ENST00000531656 154 ntBASIC1.2□□□□□ -2.22
ATG4BQ9Y4P1 MIR3664-201ENST00000579074 99 ntBASIC1.2□□□□□ -2.22
ATG4BQ9Y4P1 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
ATG4BQ9Y4P1 RNU4-79P-201ENST00000362764 141 ntBASIC1.19□□□□□ -2.22
ATG4BQ9Y4P1 Y_RNA.80-201ENST00000362996 102 ntBASIC1.19□□□□□ -2.22
ATG4BQ9Y4P1 RNY1P10-201ENST00000363268 113 ntBASIC1.19□□□□□ -2.22
ATG4BQ9Y4P1 Y_RNA.315-201ENST00000365117 102 ntBASIC1.19□□□□□ -2.22
ATG4BQ9Y4P1 Y_RNA.485-201ENST00000384395 102 ntBASIC1.19□□□□□ -2.22
ATG4BQ9Y4P1 MIR520G-201ENST00000385064 90 ntBASIC1.19□□□□□ -2.22
ATG4BQ9Y4P1 MIR660-201ENST00000385235 97 ntBASIC1.19□□□□□ -2.22
ATG4BQ9Y4P1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
ATG4BQ9Y4P1 MTND1P14-201ENST00000427400 950 ntBASIC1.19□□□□□ -2.22
ATG4BQ9Y4P1 AL160004.2-201ENST00000432935 350 ntBASIC1.19□□□□□ -2.22
ATG4BQ9Y4P1 AC092991.1-201ENST00000477176 376 ntBASIC1.19□□□□□ -2.22
ATG4BQ9Y4P1 RNU6-966P-201ENST00000516479 104 ntBASIC1.19□□□□□ -2.22
ATG4BQ9Y4P1 RNA5SP168-201ENST00000516642 112 ntBASIC1.19□□□□□ -2.22
ATG4BQ9Y4P1 CYP3A52P-201ENST00000563326 91 ntBASIC1.19□□□□□ -2.22
ATG4BQ9Y4P1 MIR5188-201ENST00000583467 113 ntBASIC1.19□□□□□ -2.22
ATG4BQ9Y4P1 RPS29P30-201ENST00000600975 111 ntBASIC1.19□□□□□ -2.22
ATG4BQ9Y4P1 MIR8065-201ENST00000620577 100 ntBASIC1.19□□□□□ -2.22
ATG4BQ9Y4P1 Y_RNA.5-201ENST00000362334 102 ntBASIC1.18□□□□□ -2.22
ATG4BQ9Y4P1 RNU4-76P-201ENST00000364509 141 ntBASIC1.18□□□□□ -2.22
ATG4BQ9Y4P1 RNU6-392P-201ENST00000364926 101 ntBASIC1.18□□□□□ -2.22
ATG4BQ9Y4P1 RNU6-1175P-201ENST00000365200 107 ntBASIC1.18□□□□□ -2.22
ATG4BQ9Y4P1 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.18□□□□□ -2.22
ATG4BQ9Y4P1 U8.16-201ENST00000391279 133 ntBASIC1.18□□□□□ -2.22
ATG4BQ9Y4P1 AL354751.2-201ENST00000415471 210 ntBASIC1.18□□□□□ -2.22
ATG4BQ9Y4P1 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.18□□□□□ -2.22
ATG4BQ9Y4P1 AC093850.1-201ENST00000454121 251 ntBASIC1.18□□□□□ -2.22
ATG4BQ9Y4P1 AL049830.1-201ENST00000468034 425 ntBASIC1.18□□□□□ -2.22
ATG4BQ9Y4P1 RNU6-976P-201ENST00000516086 111 ntBASIC1.18□□□□□ -2.22
ATG4BQ9Y4P1 RNU4-77P-201ENST00000516692 156 ntBASIC1.18□□□□□ -2.22
ATG4BQ9Y4P1 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.18□□□□□ -2.22
ATG4BQ9Y4P1 MIR4781-201ENST00000585250 76 ntBASIC1.18□□□□□ -2.22
ATG4BQ9Y4P1 AL513534.2-201ENST00000603836 250 ntBASIC1.18□□□□□ -2.22
ATG4BQ9Y4P1 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.18□□□□□ -2.22
ATG4BQ9Y4P1 AC006157.1-201ENST00000611750 366 ntBASIC1.18□□□□□ -2.22
ATG4BQ9Y4P1 Y_RNA.164-201ENST00000363709 102 ntBASIC1.17□□□□□ -2.22
ATG4BQ9Y4P1 Y_RNA.252-201ENST00000364556 101 ntBASIC1.17□□□□□ -2.22
ATG4BQ9Y4P1 RNU6-424P-201ENST00000384367 105 ntBASIC1.17□□□□□ -2.22
ATG4BQ9Y4P1 SNORD116-13-201ENST00000384408 92 ntBASIC1.17□□□□□ -2.22
ATG4BQ9Y4P1 MIR618-201ENST00000385287 98 ntBASIC1.17□□□□□ -2.22
ATG4BQ9Y4P1 RNU5A-5P-201ENST00000411054 116 ntBASIC1.17□□□□□ -2.22
ATG4BQ9Y4P1 OR9P1P-201ENST00000496431 281 ntBASIC1.17□□□□□ -2.22
ATG4BQ9Y4P1 RNU7-12P-201ENST00000516030 62 ntBASIC1.17□□□□□ -2.22
ATG4BQ9Y4P1 Y_RNA.676-201ENST00000516393 96 ntBASIC1.17□□□□□ -2.22
ATG4BQ9Y4P1 RNU6-922P-201ENST00000516753 99 ntBASIC1.17□□□□□ -2.22
ATG4BQ9Y4P1 AL358944.1-201ENST00000528537 144 ntBASIC1.17□□□□□ -2.22
ATG4BQ9Y4P1 AL138825.1-201ENST00000618587 192 ntBASIC1.17□□□□□ -2.22
ATG4BQ9Y4P1 AC091925.1-201ENST00000623204 462 ntBASIC1.17□□□□□ -2.22
ATG4BQ9Y4P1 AL606534.2-204ENST00000635008 178 ntBASIC1.17□□□□□ -2.22
ATG4BQ9Y4P1 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 172 ms