Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 RPL23AP54-201ENST00000495129 419 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 RNU7-115P-201ENST00000516433 55 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 SNORA31.23-201ENST00000517219 133 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 AC090142.3-201ENST00000519012 385 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 AC025166.1-201ENST00000612411 163 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 AC008264.2-201ENST00000610193 3731 ntBASIC1.82□□□□□ -2.12
NOTCH3Q9UM47 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC1.81□□□□□ -2.12
NOTCH3Q9UM47 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC1.81□□□□□ -2.12
NOTCH3Q9UM47 MTND5P18-201ENST00000445624 1801 ntBASIC1.81□□□□□ -2.12
NOTCH3Q9UM47 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC1.81□□□□□ -2.12
NOTCH3Q9UM47 RNU6-766P-201ENST00000362478 107 ntBASIC1.81□□□□□ -2.12
NOTCH3Q9UM47 RNU6-640P-201ENST00000363693 105 ntBASIC1.81□□□□□ -2.12
NOTCH3Q9UM47 Y_RNA.634-201ENST00000364811 113 ntBASIC1.81□□□□□ -2.12
NOTCH3Q9UM47 U8.6-201ENST00000364939 135 ntBASIC1.81□□□□□ -2.12
NOTCH3Q9UM47 RNU6-49P-201ENST00000384256 107 ntBASIC1.81□□□□□ -2.12
NOTCH3Q9UM47 MIR1255A-201ENST00000408338 113 ntBASIC1.81□□□□□ -2.12
NOTCH3Q9UM47 AC019205.3-201ENST00000424573 156 ntBASIC1.81□□□□□ -2.12
NOTCH3Q9UM47 AL590383.1-201ENST00000428602 75 ntBASIC1.81□□□□□ -2.12
NOTCH3Q9UM47 MIR378D2-201ENST00000580636 98 ntBASIC1.81□□□□□ -2.12
NOTCH3Q9UM47 UBE2Q2P6-201ENST00000612666 153 ntBASIC1.81□□□□□ -2.12
NOTCH3Q9UM47 AC002076.2-201ENST00000617362 122 ntBASIC1.81□□□□□ -2.12
NOTCH3Q9UM47 MIR2052-201ENST00000636055 55 ntBASIC1.81□□□□□ -2.12
NOTCH3Q9UM47 AL596211.1-201ENST00000569873 2277 ntBASIC1.81□□□□□ -2.12
NOTCH3Q9UM47 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
NOTCH3Q9UM47 RNU6-778P-201ENST00000363269 103 ntBASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 MIRLET7F2-201ENST00000385277 83 ntBASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 SNORA26.9-201ENST00000391322 122 ntBASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 RNU6-592P-201ENST00000411333 103 ntBASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 AL365496.1-201ENST00000426885 215 ntBASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 TRAPPC2P9-201ENST00000434556 343 ntBASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 HMGN2P32-201ENST00000444648 269 ntBASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 AC117454.1-201ENST00000491120 168 ntBASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 Y_RNA.685-201ENST00000516532 108 ntBASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 Y_RNA.757-201ENST00000578934 114 ntBASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 AC062037.1-201ENST00000605302 128 ntBASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 MIR6733-201ENST00000635723 61 ntBASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 AL159152.1-201ENST00000635019 2587 ntBASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 AL023284.1-201ENST00000403956 276 ntBASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 NDUFS5P3-201ENST00000450668 321 ntBASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 IFNWP4-201ENST00000453148 294 ntBASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 RPL31P41-201ENST00000477967 372 ntBASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 RNU6-107P-201ENST00000516643 102 ntBASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 RPL30P11-203ENST00000598995 310 ntBASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 U6.115-201ENST00000636045 103 ntBASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
NOTCH3Q9UM47 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 RNU6-884P-201ENST00000363889 107 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 RNU1-100P-201ENST00000365255 165 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 AL133412.1-201ENST00000380194 2992 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 SNORD116-13-201ENST00000384408 92 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 SNORA51.10-201ENST00000384418 136 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 MIR124-3-201ENST00000384866 87 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 MIR1290-201ENST00000408735 78 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 NDUFS5P4-201ENST00000412983 318 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 AC091179.3-201ENST00000474761 144 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 RNU6-970P-201ENST00000516312 107 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 SNORA18.4-201ENST00000516440 124 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 MIR3186-201ENST00000577404 85 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 AL365205.2-201ENST00000594586 68 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 AC025521.1-201ENST00000621624 286 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 MIR1245B-201ENST00000636115 69 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 AL356292.1-201ENST00000283110 373 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 Y_RNA.114-201ENST00000363265 113 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 SNORA63.5-201ENST00000363548 123 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 Y_RNA.229-201ENST00000364347 113 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 SNORA67.2-201ENST00000384300 149 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 SNORA1.3-201ENST00000384676 136 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 MIR548A1-201ENST00000385041 97 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 U8.13-201ENST00000390842 128 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 SNORA12-201ENST00000391162 147 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 RNA5SP496-201ENST00000391240 109 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 AL590004.2-201ENST00000404787 371 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 RNA5SP504-201ENST00000410676 117 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 RN7SL297P-201ENST00000483161 293 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 RPS29P20-201ENST00000489592 171 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 SNORA9.3-201ENST00000516383 129 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 MIR4458-201ENST00000578872 75 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 SNORD11B-201ENST00000607707 90 ntBASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.79□□□□□ -2.12
NOTCH3Q9UM47 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC1.78□□□□□ -2.12
NOTCH3Q9UM47 Y_RNA.432-201ENST00000384087 111 ntBASIC1.78□□□□□ -2.12
NOTCH3Q9UM47 RNU6-1152P-201ENST00000384576 107 ntBASIC1.78□□□□□ -2.12
NOTCH3Q9UM47 MIR29B2-201ENST00000385055 81 ntBASIC1.78□□□□□ -2.12
NOTCH3Q9UM47 MIR208B-201ENST00000401172 77 ntBASIC1.78□□□□□ -2.12
NOTCH3Q9UM47 RPS27AP10-201ENST00000496103 208 ntBASIC1.78□□□□□ -2.12
NOTCH3Q9UM47 RNU7-149P-201ENST00000516739 59 ntBASIC1.78□□□□□ -2.12
NOTCH3Q9UM47 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.78□□□□□ -2.12
NOTCH3Q9UM47 RNU6-91P-201ENST00000607774 107 ntBASIC1.78□□□□□ -2.12
NOTCH3Q9UM47 AL121890.5-201ENST00000620848 304 ntBASIC1.78□□□□□ -2.12
NOTCH3Q9UM47 WARS-244ENST00000627608 123 ntTSL 5 BASIC1.78□□□□□ -2.12
NOTCH3Q9UM47 MIR3529-201ENST00000637713 78 ntBASIC1.78□□□□□ -2.12
NOTCH3Q9UM47 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 264.1 ms