Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 RNU6-917P-201ENST00000516294 104 ntBASIC0.91□□□□□ -2.26
ITCHQ96J02 Y_RNA.691-201ENST00000516611 103 ntBASIC0.91□□□□□ -2.26
ITCHQ96J02 RNU6-1223P-201ENST00000517124 104 ntBASIC0.91□□□□□ -2.26
ITCHQ96J02 AC090049.2-201ENST00000550377 109 ntBASIC0.91□□□□□ -2.26
ITCHQ96J02 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC0.91□□□□□ -2.26
ITCHQ96J02 U6atac.1-201ENST00000616025 117 ntBASIC0.91□□□□□ -2.26
ITCHQ96J02 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.91□□□□□ -2.26
ITCHQ96J02 MIR6767-201ENST00000637302 66 ntBASIC0.91□□□□□ -2.26
ITCHQ96J02 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.91□□□□□ -2.26
ITCHQ96J02 RNU6-342P-201ENST00000384521 104 ntBASIC0.9□□□□□ -2.27
ITCHQ96J02 MIR598-201ENST00000384868 97 ntBASIC0.9□□□□□ -2.27
ITCHQ96J02 MIR222-201ENST00000384992 110 ntBASIC0.9□□□□□ -2.27
ITCHQ96J02 SNORD41-201ENST00000386967 70 ntBASIC0.9□□□□□ -2.27
ITCHQ96J02 AL451046.2-201ENST00000403074 277 ntBASIC0.9□□□□□ -2.27
ITCHQ96J02 RNU4-14P-201ENST00000410858 122 ntBASIC0.9□□□□□ -2.27
ITCHQ96J02 RNU5A-5P-201ENST00000411054 116 ntBASIC0.9□□□□□ -2.27
ITCHQ96J02 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.9□□□□□ -2.27
ITCHQ96J02 Y_RNA.635-201ENST00000459041 101 ntBASIC0.9□□□□□ -2.27
ITCHQ96J02 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.9□□□□□ -2.27
ITCHQ96J02 RNU6-322P-201ENST00000516010 103 ntBASIC0.9□□□□□ -2.27
ITCHQ96J02 SNORA31.2-201ENST00000516019 134 ntBASIC0.9□□□□□ -2.27
ITCHQ96J02 RNU7-12P-201ENST00000516030 62 ntBASIC0.9□□□□□ -2.27
ITCHQ96J02 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.9□□□□□ -2.27
ITCHQ96J02 MTND4LP26-201ENST00000518144 282 ntBASIC0.9□□□□□ -2.27
ITCHQ96J02 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.9□□□□□ -2.27
ITCHQ96J02 MIR151B-201ENST00000584249 96 ntBASIC0.9□□□□□ -2.27
ITCHQ96J02 WT1-AS_8.1-201ENST00000615200 275 ntBASIC0.9□□□□□ -2.27
ITCHQ96J02 MIR6788-201ENST00000618842 66 ntBASIC0.9□□□□□ -2.27
ITCHQ96J02 AC098679.4-201ENST00000624241 654 ntBASIC0.9□□□□□ -2.27
ITCHQ96J02 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
ITCHQ96J02 SNORD114-7-201ENST00000362520 77 ntBASIC0.89□□□□□ -2.27
ITCHQ96J02 Y_RNA.36-201ENST00000362602 112 ntBASIC0.89□□□□□ -2.27
ITCHQ96J02 Y_RNA.243-201ENST00000364481 109 ntBASIC0.89□□□□□ -2.27
ITCHQ96J02 SNORA2.2-201ENST00000365473 135 ntBASIC0.89□□□□□ -2.27
ITCHQ96J02 MIR548J-201ENST00000408833 112 ntBASIC0.89□□□□□ -2.27
ITCHQ96J02 PDCL2P1-201ENST00000419302 352 ntBASIC0.89□□□□□ -2.27
ITCHQ96J02 AC093850.1-201ENST00000454121 251 ntBASIC0.89□□□□□ -2.27
ITCHQ96J02 AC233266.1-201ENST00000454518 96 ntBASIC0.89□□□□□ -2.27
ITCHQ96J02 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.89□□□□□ -2.27
ITCHQ96J02 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.89□□□□□ -2.27
ITCHQ96J02 SNORA31.4-201ENST00000516049 129 ntBASIC0.89□□□□□ -2.27
ITCHQ96J02 SNORA70.22-201ENST00000517160 124 ntBASIC0.89□□□□□ -2.27
ITCHQ96J02 AC242852.1-201ENST00000612151 96 ntBASIC0.89□□□□□ -2.27
ITCHQ96J02 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.89□□□□□ -2.27
ITCHQ96J02 AC244015.1-201ENST00000622301 99 ntBASIC0.89□□□□□ -2.27
ITCHQ96J02 MIRLET7C-201ENST00000362160 84 ntBASIC0.88□□□□□ -2.27
ITCHQ96J02 Y_RNA.577-201ENST00000384794 101 ntBASIC0.88□□□□□ -2.27
ITCHQ96J02 MIR19B1-201ENST00000384829 87 ntBASIC0.88□□□□□ -2.27
ITCHQ96J02 MIR625-201ENST00000385047 85 ntBASIC0.88□□□□□ -2.27
ITCHQ96J02 SNORA69.1-201ENST00000390904 137 ntBASIC0.88□□□□□ -2.27
ITCHQ96J02 RNU6-876P-201ENST00000391295 104 ntBASIC0.88□□□□□ -2.27
ITCHQ96J02 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.88□□□□□ -2.27
ITCHQ96J02 RNU6-370P-201ENST00000411008 104 ntBASIC0.88□□□□□ -2.27
ITCHQ96J02 RNU6-1054P-201ENST00000411293 104 ntBASIC0.88□□□□□ -2.27
ITCHQ96J02 MTND4P28-201ENST00000426217 387 ntBASIC0.88□□□□□ -2.27
ITCHQ96J02 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.88□□□□□ -2.27
ITCHQ96J02 AL049830.1-201ENST00000468034 425 ntBASIC0.88□□□□□ -2.27
ITCHQ96J02 AC022493.2-201ENST00000506122 481 ntBASIC0.88□□□□□ -2.27
ITCHQ96J02 RNU6-408P-201ENST00000515910 100 ntBASIC0.88□□□□□ -2.27
ITCHQ96J02 RNU6-1096P-201ENST00000517089 102 ntBASIC0.88□□□□□ -2.27
ITCHQ96J02 RNU6-264P-201ENST00000517134 104 ntBASIC0.88□□□□□ -2.27
ITCHQ96J02 AL358944.1-201ENST00000528537 144 ntBASIC0.88□□□□□ -2.27
ITCHQ96J02 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.88□□□□□ -2.27
ITCHQ96J02 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.88□□□□□ -2.27
ITCHQ96J02 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.88□□□□□ -2.27
ITCHQ96J02 AL020996.3-201ENST00000606617 222 ntBASIC0.88□□□□□ -2.27
ITCHQ96J02 AC092794.1-201ENST00000612734 582 ntBASIC0.88□□□□□ -2.27
ITCHQ96J02 AC012676.2-201ENST00000619258 186 ntBASIC0.88□□□□□ -2.27
ITCHQ96J02 TPTEP1-208ENST00000636884 213 ntBASIC0.88□□□□□ -2.27
ITCHQ96J02 RNU4-79P-201ENST00000362764 141 ntBASIC0.87□□□□□ -2.27
ITCHQ96J02 Y_RNA.248-201ENST00000364501 109 ntBASIC0.87□□□□□ -2.27
ITCHQ96J02 RNU6-1080P-201ENST00000383982 107 ntBASIC0.87□□□□□ -2.27
ITCHQ96J02 RNU6-136P-201ENST00000384663 107 ntBASIC0.87□□□□□ -2.27
ITCHQ96J02 MT-TL1-201ENST00000386347 75 ntBASIC0.87□□□□□ -2.27
ITCHQ96J02 RNU6-910P-201ENST00000390844 107 ntBASIC0.87□□□□□ -2.27
ITCHQ96J02 SNORA75.6-201ENST00000391318 127 ntBASIC0.87□□□□□ -2.27
ITCHQ96J02 Y_RNA.592-201ENST00000410274 109 ntBASIC0.87□□□□□ -2.27
ITCHQ96J02 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.87□□□□□ -2.27
ITCHQ96J02 AC048334.1-201ENST00000477975 159 ntBASIC0.87□□□□□ -2.27
ITCHQ96J02 RNU6-120P-201ENST00000516077 103 ntBASIC0.87□□□□□ -2.27
ITCHQ96J02 RNU6-63P-201ENST00000516690 95 ntBASIC0.87□□□□□ -2.27
ITCHQ96J02 AC023442.1-201ENST00000531247 422 ntBASIC0.87□□□□□ -2.27
ITCHQ96J02 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.87□□□□□ -2.27
ITCHQ96J02 AL117336.2-201ENST00000602435 335 ntBASIC0.87□□□□□ -2.27
ITCHQ96J02 AL357312.1-201ENST00000603879 298 ntBASIC0.87□□□□□ -2.27
ITCHQ96J02 AC087588.2-201ENST00000617667 426 ntBASIC0.87□□□□□ -2.27
ITCHQ96J02 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
ITCHQ96J02 RNU6-1188P-201ENST00000363795 107 ntBASIC0.86□□□□□ -2.27
ITCHQ96J02 RNU6-961P-201ENST00000363893 105 ntBASIC0.86□□□□□ -2.27
ITCHQ96J02 SNORD115-30-201ENST00000364117 82 ntBASIC0.86□□□□□ -2.27
ITCHQ96J02 RNU4-41P-201ENST00000364426 143 ntBASIC0.86□□□□□ -2.27
ITCHQ96J02 Y_RNA.361-201ENST00000365515 120 ntBASIC0.86□□□□□ -2.27
ITCHQ96J02 RNU6-310P-201ENST00000384655 107 ntBASIC0.86□□□□□ -2.27
ITCHQ96J02 RNU6-1156P-201ENST00000410365 100 ntBASIC0.86□□□□□ -2.27
ITCHQ96J02 Y_RNA.646-201ENST00000410980 101 ntBASIC0.86□□□□□ -2.27
ITCHQ96J02 MTND1P2-201ENST00000430604 821 ntBASIC0.86□□□□□ -2.27
ITCHQ96J02 AC245047.7-201ENST00000440265 293 ntBASIC0.86□□□□□ -2.27
ITCHQ96J02 Z98949.2-201ENST00000440996 144 ntBASIC0.86□□□□□ -2.27
ITCHQ96J02 HSPE1P13-201ENST00000451143 297 ntBASIC0.86□□□□□ -2.27
ITCHQ96J02 ELOCP24-201ENST00000456370 334 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 208.8 ms