Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 RNU6-1337P-201ENST00000516525 95 ntBASIC2.26□□□□□ -2.05
TRIM43Q96BQ3 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC2.26□□□□□ -2.05
TRIM43Q96BQ3 AC012433.1-201ENST00000588916 398 ntBASIC2.26□□□□□ -2.05
TRIM43Q96BQ3 AL137847.3-201ENST00000611521 109 ntBASIC2.26□□□□□ -2.05
TRIM43Q96BQ3 U2.14-201ENST00000615943 113 ntBASIC2.26□□□□□ -2.05
TRIM43Q96BQ3 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.26□□□□□ -2.05
TRIM43Q96BQ3 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
TRIM43Q96BQ3 Y_RNA.44-201ENST00000362676 108 ntBASIC2.25□□□□□ -2.05
TRIM43Q96BQ3 Y_RNA.352-201ENST00000365439 102 ntBASIC2.25□□□□□ -2.05
TRIM43Q96BQ3 SNORA8-201ENST00000384574 139 ntBASIC2.25□□□□□ -2.05
TRIM43Q96BQ3 RNA5SP467-201ENST00000391274 118 ntBASIC2.25□□□□□ -2.05
TRIM43Q96BQ3 BTF3P4-201ENST00000418852 495 ntBASIC2.25□□□□□ -2.05
TRIM43Q96BQ3 AC099677.2-201ENST00000436385 175 ntBASIC2.25□□□□□ -2.05
TRIM43Q96BQ3 RNA5SP445-201ENST00000515889 115 ntBASIC2.25□□□□□ -2.05
TRIM43Q96BQ3 RNU7-99P-201ENST00000516271 62 ntBASIC2.25□□□□□ -2.05
TRIM43Q96BQ3 AC024995.1-201ENST00000523014 93 ntBASIC2.25□□□□□ -2.05
TRIM43Q96BQ3 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.25□□□□□ -2.05
TRIM43Q96BQ3 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.25□□□□□ -2.05
TRIM43Q96BQ3 U1.36-201ENST00000620684 176 ntBASIC2.25□□□□□ -2.05
TRIM43Q96BQ3 AC022513.1-201ENST00000624512 117 ntBASIC2.25□□□□□ -2.05
TRIM43Q96BQ3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.24□□□□□ -2.05
TRIM43Q96BQ3 Y_RNA.368-201ENST00000365547 113 ntBASIC2.24□□□□□ -2.05
TRIM43Q96BQ3 Y_RNA.456-201ENST00000384232 111 ntBASIC2.24□□□□□ -2.05
TRIM43Q96BQ3 Y_RNA.562-201ENST00000384695 113 ntBASIC2.24□□□□□ -2.05
TRIM43Q96BQ3 RNA5SP450-201ENST00000411206 102 ntBASIC2.24□□□□□ -2.05
TRIM43Q96BQ3 EBAG9P1-201ENST00000418955 543 ntBASIC2.24□□□□□ -2.05
TRIM43Q96BQ3 MTND2P29-201ENST00000438595 412 ntBASIC2.24□□□□□ -2.05
TRIM43Q96BQ3 SNORA27.4-201ENST00000516650 95 ntBASIC2.24□□□□□ -2.05
TRIM43Q96BQ3 RNU2-19P-201ENST00000517288 84 ntBASIC2.24□□□□□ -2.05
TRIM43Q96BQ3 MIR5094-201ENST00000578766 85 ntBASIC2.24□□□□□ -2.05
TRIM43Q96BQ3 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.24□□□□□ -2.05
TRIM43Q96BQ3 MIR8070-201ENST00000616510 88 ntBASIC2.24□□□□□ -2.05
TRIM43Q96BQ3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.24□□□□□ -2.05
TRIM43Q96BQ3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
TRIM43Q96BQ3 Y_RNA.54-201ENST00000362766 105 ntBASIC2.23□□□□□ -2.05
TRIM43Q96BQ3 RNU4-13P-201ENST00000364019 141 ntBASIC2.23□□□□□ -2.05
TRIM43Q96BQ3 Y_RNA.307-201ENST00000365022 117 ntBASIC2.23□□□□□ -2.05
TRIM43Q96BQ3 SNORA48.1-201ENST00000390879 135 ntBASIC2.23□□□□□ -2.05
TRIM43Q96BQ3 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.23□□□□□ -2.05
TRIM43Q96BQ3 AC073413.2-201ENST00000604332 360 ntBASIC2.23□□□□□ -2.05
TRIM43Q96BQ3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.23□□□□□ -2.05
TRIM43Q96BQ3 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC2.22□□□□□ -2.05
TRIM43Q96BQ3 AL596028.1-201ENST00000326971 197 ntBASIC2.22□□□□□ -2.05
TRIM43Q96BQ3 SNORA33-201ENST00000363664 130 ntBASIC2.22□□□□□ -2.05
TRIM43Q96BQ3 Y_RNA.188-201ENST00000363952 111 ntBASIC2.22□□□□□ -2.05
TRIM43Q96BQ3 Y_RNA.478-201ENST00000384358 107 ntBASIC2.22□□□□□ -2.05
TRIM43Q96BQ3 RNA5SP501-201ENST00000410990 112 ntBASIC2.22□□□□□ -2.05
TRIM43Q96BQ3 RPS20P10-201ENST00000451209 253 ntBASIC2.22□□□□□ -2.05
TRIM43Q96BQ3 AC055731.1-201ENST00000474387 401 ntBASIC2.22□□□□□ -2.05
TRIM43Q96BQ3 RNU6-63P-201ENST00000516690 95 ntBASIC2.22□□□□□ -2.05
TRIM43Q96BQ3 AC136628.3-201ENST00000521868 290 ntBASIC2.22□□□□□ -2.05
TRIM43Q96BQ3 AC006006.1-201ENST00000603082 144 ntBASIC2.22□□□□□ -2.05
TRIM43Q96BQ3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.22□□□□□ -2.05
TRIM43Q96BQ3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.21□□□□□ -2.06
TRIM43Q96BQ3 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
TRIM43Q96BQ3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
TRIM43Q96BQ3 UBE2WP1-201ENST00000362030 340 ntBASIC2.21□□□□□ -2.06
TRIM43Q96BQ3 RNU6-1019P-201ENST00000364424 107 ntBASIC2.21□□□□□ -2.06
TRIM43Q96BQ3 Y_RNA.275-201ENST00000364726 110 ntBASIC2.21□□□□□ -2.06
TRIM43Q96BQ3 Y_RNA.310-201ENST00000365063 113 ntBASIC2.21□□□□□ -2.06
TRIM43Q96BQ3 RNU6-117P-201ENST00000365415 107 ntBASIC2.21□□□□□ -2.06
TRIM43Q96BQ3 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC2.21□□□□□ -2.06
TRIM43Q96BQ3 Y_RNA.416-201ENST00000384014 113 ntBASIC2.21□□□□□ -2.06
TRIM43Q96BQ3 Y_RNA.447-201ENST00000384184 113 ntBASIC2.21□□□□□ -2.06
TRIM43Q96BQ3 RNU6-662P-201ENST00000384253 104 ntBASIC2.21□□□□□ -2.06
TRIM43Q96BQ3 Y_RNA.477-201ENST00000384352 108 ntBASIC2.21□□□□□ -2.06
TRIM43Q96BQ3 Y_RNA.489-201ENST00000384410 101 ntBASIC2.21□□□□□ -2.06
TRIM43Q96BQ3 MIR499A-201ENST00000384903 122 ntBASIC2.21□□□□□ -2.06
TRIM43Q96BQ3 AL603910.2-201ENST00000407268 136 ntBASIC2.21□□□□□ -2.06
TRIM43Q96BQ3 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
TRIM43Q96BQ3 HSPE1P21-201ENST00000438283 308 ntBASIC2.21□□□□□ -2.06
TRIM43Q96BQ3 AC069257.2-201ENST00000441819 155 ntBASIC2.21□□□□□ -2.06
TRIM43Q96BQ3 AC005840.1-201ENST00000498412 377 ntBASIC2.21□□□□□ -2.06
TRIM43Q96BQ3 RNVU1-2-201ENST00000516326 135 ntBASIC2.21□□□□□ -2.06
TRIM43Q96BQ3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.2□□□□□ -2.06
TRIM43Q96BQ3 AC008555.8-201ENST00000623602 2168 ntBASIC2.2□□□□□ -2.06
TRIM43Q96BQ3 MIR337-201ENST00000362281 93 ntBASIC2.2□□□□□ -2.06
TRIM43Q96BQ3 RNU6-661P-201ENST00000362409 107 ntBASIC2.2□□□□□ -2.06
TRIM43Q96BQ3 RNA5SP190-201ENST00000365222 118 ntBASIC2.2□□□□□ -2.06
TRIM43Q96BQ3 SNORD116-13-201ENST00000384408 92 ntBASIC2.2□□□□□ -2.06
TRIM43Q96BQ3 RNU6-136P-201ENST00000384663 107 ntBASIC2.2□□□□□ -2.06
TRIM43Q96BQ3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.2□□□□□ -2.06
TRIM43Q96BQ3 AL445685.2-201ENST00000422551 342 ntBASIC2.2□□□□□ -2.06
TRIM43Q96BQ3 AC245517.4-201ENST00000448601 281 ntBASIC2.2□□□□□ -2.06
TRIM43Q96BQ3 SNORD13-201ENST00000459299 104 ntBASIC2.2□□□□□ -2.06
TRIM43Q96BQ3 RNU7-94P-201ENST00000459576 63 ntBASIC2.2□□□□□ -2.06
TRIM43Q96BQ3 RPL36AP21-201ENST00000490372 323 ntBASIC2.2□□□□□ -2.06
TRIM43Q96BQ3 AL163195.1-201ENST00000496941 348 ntBASIC2.2□□□□□ -2.06
TRIM43Q96BQ3 RNU6-1271P-201ENST00000517049 105 ntBASIC2.2□□□□□ -2.06
TRIM43Q96BQ3 RNU7-128P-201ENST00000517247 62 ntBASIC2.2□□□□□ -2.06
TRIM43Q96BQ3 MIR3128-201ENST00000581957 66 ntBASIC2.2□□□□□ -2.06
TRIM43Q96BQ3 AL162424.1-201ENST00000602325 221 ntBASIC2.2□□□□□ -2.06
TRIM43Q96BQ3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.2□□□□□ -2.06
TRIM43Q96BQ3 AC004832.4-201ENST00000608952 331 ntBASIC2.2□□□□□ -2.06
TRIM43Q96BQ3 AC068647.2-201ENST00000637380 353 ntBASIC2.2□□□□□ -2.06
TRIM43Q96BQ3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
TRIM43Q96BQ3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
TRIM43Q96BQ3 Y_RNA.172-201ENST00000363765 102 ntBASIC2.19□□□□□ -2.06
TRIM43Q96BQ3 SNORD27-201ENST00000363981 72 ntBASIC2.19□□□□□ -2.06
TRIM43Q96BQ3 SNORA20.1-201ENST00000364790 130 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 178.5 ms