Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 SNORA53-201ENST00000391141 249 ntBASIC2.01□□□□□ -2.09
HMGB4Q8WW32 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC2.01□□□□□ -2.09
HMGB4Q8WW32 RNU6-191P-201ENST00000516295 94 ntBASIC2.01□□□□□ -2.09
HMGB4Q8WW32 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.01□□□□□ -2.09
HMGB4Q8WW32 MIR5694-201ENST00000581190 76 ntBASIC2.01□□□□□ -2.09
HMGB4Q8WW32 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HMGB4Q8WW32 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HMGB4Q8WW32 AC018630.2-201ENST00000534866 2403 ntBASIC2□□□□□ -2.09
HMGB4Q8WW32 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2□□□□□ -2.09
HMGB4Q8WW32 Y_RNA.310-201ENST00000365063 113 ntBASIC2□□□□□ -2.09
HMGB4Q8WW32 Y_RNA.368-201ENST00000365547 113 ntBASIC2□□□□□ -2.09
HMGB4Q8WW32 RNU6-376P-201ENST00000384731 106 ntBASIC2□□□□□ -2.09
HMGB4Q8WW32 RNU11-5P-201ENST00000391216 129 ntBASIC2□□□□□ -2.09
HMGB4Q8WW32 RNU6-855P-201ENST00000410395 104 ntBASIC2□□□□□ -2.09
HMGB4Q8WW32 AL356379.1-201ENST00000414105 126 ntBASIC2□□□□□ -2.09
HMGB4Q8WW32 AC244636.1-201ENST00000421152 228 ntBASIC2□□□□□ -2.09
HMGB4Q8WW32 AL135790.2-201ENST00000437701 267 ntBASIC2□□□□□ -2.09
HMGB4Q8WW32 AL606517.2-201ENST00000442855 241 ntBASIC2□□□□□ -2.09
HMGB4Q8WW32 RPS27P1-201ENST00000450552 247 ntBASIC2□□□□□ -2.09
HMGB4Q8WW32 MTND4LP30-201ENST00000454092 297 ntBASIC2□□□□□ -2.09
HMGB4Q8WW32 RPS27P21-201ENST00000486977 252 ntBASIC2□□□□□ -2.09
HMGB4Q8WW32 RPL36AP21-201ENST00000490372 323 ntBASIC2□□□□□ -2.09
HMGB4Q8WW32 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2□□□□□ -2.09
HMGB4Q8WW32 RPL21P9-201ENST00000556149 474 ntBASIC2□□□□□ -2.09
HMGB4Q8WW32 AP000942.3-201ENST00000603702 160 ntBASIC2□□□□□ -2.09
HMGB4Q8WW32 AC022217.4-201ENST00000604389 163 ntBASIC2□□□□□ -2.09
HMGB4Q8WW32 AC004832.4-201ENST00000608952 331 ntBASIC2□□□□□ -2.09
HMGB4Q8WW32 U6.104-201ENST00000637979 90 ntBASIC2□□□□□ -2.09
HMGB4Q8WW32 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
HMGB4Q8WW32 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
HMGB4Q8WW32 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
HMGB4Q8WW32 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
HMGB4Q8WW32 Y_RNA.456-201ENST00000384232 111 ntBASIC1.99□□□□□ -2.09
HMGB4Q8WW32 RNU6-1248P-201ENST00000391096 64 ntBASIC1.99□□□□□ -2.09
HMGB4Q8WW32 MIR1302-3-201ENST00000408128 138 ntBASIC1.99□□□□□ -2.09
HMGB4Q8WW32 RNA5SP511-201ENST00000410487 115 ntBASIC1.99□□□□□ -2.09
HMGB4Q8WW32 AL162725.1-201ENST00000435405 301 ntBASIC1.99□□□□□ -2.09
HMGB4Q8WW32 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.99□□□□□ -2.09
HMGB4Q8WW32 RPS20P10-201ENST00000451209 253 ntBASIC1.99□□□□□ -2.09
HMGB4Q8WW32 RNU7-94P-201ENST00000459576 63 ntBASIC1.99□□□□□ -2.09
HMGB4Q8WW32 SERF1AP1-201ENST00000514575 187 ntBASIC1.99□□□□□ -2.09
HMGB4Q8WW32 SNORA31.17-201ENST00000516953 127 ntBASIC1.99□□□□□ -2.09
HMGB4Q8WW32 RNA5SP437-201ENST00000517249 129 ntBASIC1.99□□□□□ -2.09
HMGB4Q8WW32 DEFB108E-201ENST00000524692 240 ntBASIC1.99□□□□□ -2.09
HMGB4Q8WW32 AC015720.1-201ENST00000565251 277 ntBASIC1.99□□□□□ -2.09
HMGB4Q8WW32 AC022254.1-201ENST00000567857 235 ntBASIC1.99□□□□□ -2.09
HMGB4Q8WW32 MIR4299-201ENST00000577899 72 ntBASIC1.99□□□□□ -2.09
HMGB4Q8WW32 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.99□□□□□ -2.09
HMGB4Q8WW32 AC091178.2-201ENST00000584401 117 ntBASIC1.99□□□□□ -2.09
HMGB4Q8WW32 SNRPGP19-201ENST00000603826 189 ntBASIC1.99□□□□□ -2.09
HMGB4Q8WW32 AC037487.3-201ENST00000606668 112 ntBASIC1.99□□□□□ -2.09
HMGB4Q8WW32 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.99□□□□□ -2.09
HMGB4Q8WW32 MIR6079-201ENST00000635807 62 ntBASIC1.99□□□□□ -2.09
HMGB4Q8WW32 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HMGB4Q8WW32 Y_RNA.341-201ENST00000365341 102 ntBASIC1.98□□□□□ -2.09
HMGB4Q8WW32 RNA5SP109-201ENST00000391010 116 ntBASIC1.98□□□□□ -2.09
HMGB4Q8WW32 RNA5SP233-201ENST00000459153 113 ntBASIC1.98□□□□□ -2.09
HMGB4Q8WW32 RNA5SP57-201ENST00000459463 123 ntBASIC1.98□□□□□ -2.09
HMGB4Q8WW32 AC091021.1-201ENST00000468051 388 ntBASIC1.98□□□□□ -2.09
HMGB4Q8WW32 AC104435.1-201ENST00000483483 166 ntBASIC1.98□□□□□ -2.09
HMGB4Q8WW32 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.98□□□□□ -2.09
HMGB4Q8WW32 RNA5SP182-201ENST00000516064 82 ntBASIC1.98□□□□□ -2.09
HMGB4Q8WW32 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.98□□□□□ -2.09
HMGB4Q8WW32 ZNF355P-201ENST00000427301 3216 ntBASIC1.98□□□□□ -2.09
HMGB4Q8WW32 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.97□□□□□ -2.09
HMGB4Q8WW32 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
HMGB4Q8WW32 AL391987.6-201ENST00000305671 199 ntBASIC1.97□□□□□ -2.09
HMGB4Q8WW32 MIR335-201ENST00000362173 94 ntBASIC1.97□□□□□ -2.09
HMGB4Q8WW32 SNORA25.1-201ENST00000362326 128 ntBASIC1.97□□□□□ -2.09
HMGB4Q8WW32 Y_RNA.237-201ENST00000364439 102 ntBASIC1.97□□□□□ -2.09
HMGB4Q8WW32 RNU6-136P-201ENST00000384663 107 ntBASIC1.97□□□□□ -2.09
HMGB4Q8WW32 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
HMGB4Q8WW32 SCARNA24.2-201ENST00000516968 130 ntBASIC1.97□□□□□ -2.09
HMGB4Q8WW32 AP000553.5-201ENST00000641933 54 ntBASIC1.97□□□□□ -2.09
HMGB4Q8WW32 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.09
HMGB4Q8WW32 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HMGB4Q8WW32 RNU6-196P-201ENST00000384315 107 ntBASIC1.96□□□□□ -2.1
HMGB4Q8WW32 RNU6-463P-201ENST00000384340 107 ntBASIC1.96□□□□□ -2.1
HMGB4Q8WW32 Y_RNA.556-201ENST00000384677 113 ntBASIC1.96□□□□□ -2.1
HMGB4Q8WW32 MIR520G-201ENST00000385064 90 ntBASIC1.96□□□□□ -2.1
HMGB4Q8WW32 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.96□□□□□ -2.1
HMGB4Q8WW32 RNU2-7P-201ENST00000410794 178 ntBASIC1.96□□□□□ -2.1
HMGB4Q8WW32 AC003989.2-201ENST00000440224 169 ntBASIC1.96□□□□□ -2.1
HMGB4Q8WW32 RPL23AP6-201ENST00000446637 472 ntBASIC1.96□□□□□ -2.1
HMGB4Q8WW32 AC091959.1-201ENST00000495857 238 ntBASIC1.96□□□□□ -2.1
HMGB4Q8WW32 AC136628.3-201ENST00000521868 290 ntBASIC1.96□□□□□ -2.1
HMGB4Q8WW32 MIR4503-201ENST00000582187 83 ntBASIC1.96□□□□□ -2.1
HMGB4Q8WW32 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.96□□□□□ -2.1
HMGB4Q8WW32 Y_RNA.144-201ENST00000363521 113 ntBASIC1.95□□□□□ -2.1
HMGB4Q8WW32 RNU6-801P-201ENST00000364087 105 ntBASIC1.95□□□□□ -2.1
HMGB4Q8WW32 SNORA4.2-201ENST00000365313 147 ntBASIC1.95□□□□□ -2.1
HMGB4Q8WW32 RNU6-514P-201ENST00000384208 107 ntBASIC1.95□□□□□ -2.1
HMGB4Q8WW32 RNA5SP338-201ENST00000410495 85 ntBASIC1.95□□□□□ -2.1
HMGB4Q8WW32 AC245047.3-201ENST00000429428 127 ntBASIC1.95□□□□□ -2.1
HMGB4Q8WW32 HSPE1P9-201ENST00000440046 311 ntBASIC1.95□□□□□ -2.1
HMGB4Q8WW32 Y_RNA.668-201ENST00000516233 93 ntBASIC1.95□□□□□ -2.1
HMGB4Q8WW32 RNA5SP481-201ENST00000516814 122 ntBASIC1.95□□□□□ -2.1
HMGB4Q8WW32 RNU6-341P-201ENST00000516973 96 ntBASIC1.95□□□□□ -2.1
HMGB4Q8WW32 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.95□□□□□ -2.1
HMGB4Q8WW32 MIR5089-201ENST00000580047 84 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 8.4 ms