Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.47□□□□□ -2.48
TPM4P67936 AL358934.1-201ENST00000432346 324 ntBASIC-0.47□□□□□ -2.48
TPM4P67936 NDUFA5P4-201ENST00000436704 385 ntBASIC-0.47□□□□□ -2.48
TPM4P67936 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.47□□□□□ -2.48
TPM4P67936 SNORD11.1-201ENST00000459482 85 ntBASIC-0.47□□□□□ -2.48
TPM4P67936 AC010486.3-201ENST00000511602 785 ntBASIC-0.47□□□□□ -2.48
TPM4P67936 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.47□□□□□ -2.48
TPM4P67936 AC010525.2-201ENST00000590920 195 ntBASIC-0.47□□□□□ -2.48
TPM4P67936 MIR330-201ENST00000362196 94 ntBASIC-0.48□□□□□ -2.49
TPM4P67936 Y_RNA.201-201ENST00000364052 96 ntBASIC-0.48□□□□□ -2.49
TPM4P67936 Y_RNA.253-201ENST00000364562 112 ntBASIC-0.48□□□□□ -2.49
TPM4P67936 RNU6-929P-201ENST00000384429 107 ntBASIC-0.48□□□□□ -2.49
TPM4P67936 RNU6-127P-201ENST00000390897 107 ntBASIC-0.48□□□□□ -2.49
TPM4P67936 RNU6-1158P-201ENST00000391167 107 ntBASIC-0.48□□□□□ -2.49
TPM4P67936 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.48□□□□□ -2.49
TPM4P67936 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.48□□□□□ -2.49
TPM4P67936 RPL17P19-201ENST00000489069 552 ntBASIC-0.48□□□□□ -2.49
TPM4P67936 MIR4743-201ENST00000584576 69 ntBASIC-0.48□□□□□ -2.49
TPM4P67936 AC008608.1-201ENST00000603910 127 ntBASIC-0.48□□□□□ -2.49
TPM4P67936 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-0.48□□□□□ -2.49
TPM4P67936 U8.7-201ENST00000364940 136 ntBASIC-0.49□□□□□ -2.49
TPM4P67936 RNU6-38P-201ENST00000384085 107 ntBASIC-0.49□□□□□ -2.49
TPM4P67936 MIR593-201ENST00000384856 100 ntBASIC-0.49□□□□□ -2.49
TPM4P67936 MIR193B-201ENST00000384907 83 ntBASIC-0.49□□□□□ -2.49
TPM4P67936 MIR570-201ENST00000384917 97 ntBASIC-0.49□□□□□ -2.49
TPM4P67936 MTCO2P33-201ENST00000402100 465 ntBASIC-0.49□□□□□ -2.49
TPM4P67936 MLLT10P1-201ENST00000418346 262 ntBASIC-0.49□□□□□ -2.49
TPM4P67936 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-0.49□□□□□ -2.49
TPM4P67936 AC092447.3-201ENST00000426027 686 ntBASIC-0.49□□□□□ -2.49
TPM4P67936 RNU6-329P-201ENST00000459618 107 ntBASIC-0.49□□□□□ -2.49
TPM4P67936 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.49□□□□□ -2.49
TPM4P67936 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC-0.49□□□□□ -2.49
TPM4P67936 AC098679.4-201ENST00000624241 654 ntBASIC-0.49□□□□□ -2.49
TPM4P67936 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.49□□□□□ -2.49
TPM4P67936 MIR410-201ENST00000362222 80 ntBASIC-0.5□□□□□ -2.49
TPM4P67936 RNU4-21P-201ENST00000362802 126 ntBASIC-0.5□□□□□ -2.49
TPM4P67936 SNORD50B-201ENST00000364995 70 ntBASIC-0.5□□□□□ -2.49
TPM4P67936 RNU6V-201ENST00000384105 107 ntBASIC-0.5□□□□□ -2.49
TPM4P67936 SNORA51.10-201ENST00000384418 136 ntBASIC-0.5□□□□□ -2.49
TPM4P67936 UQCRBP2-201ENST00000447827 297 ntBASIC-0.5□□□□□ -2.49
TPM4P67936 RNU6-1129P-201ENST00000515964 104 ntBASIC-0.5□□□□□ -2.49
TPM4P67936 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.5□□□□□ -2.49
TPM4P67936 Y_RNA.676-201ENST00000516393 96 ntBASIC-0.5□□□□□ -2.49
TPM4P67936 Y_RNA.122-201ENST00000363331 96 ntBASIC-0.51□□□□□ -2.49
TPM4P67936 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.51□□□□□ -2.49
TPM4P67936 RNA5SP325-201ENST00000363756 130 ntBASIC-0.51□□□□□ -2.49
TPM4P67936 RNU6-302P-201ENST00000365249 107 ntBASIC-0.51□□□□□ -2.49
TPM4P67936 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.51□□□□□ -2.49
TPM4P67936 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.51□□□□□ -2.49
TPM4P67936 RNU5A-6P-201ENST00000384136 116 ntBASIC-0.51□□□□□ -2.49
TPM4P67936 RNU6-514P-201ENST00000384208 107 ntBASIC-0.51□□□□□ -2.49
TPM4P67936 RNU6-125P-201ENST00000384505 107 ntBASIC-0.51□□□□□ -2.49
TPM4P67936 RNY1P4-201ENST00000384595 115 ntBASIC-0.51□□□□□ -2.49
TPM4P67936 BTF3P11-201ENST00000426582 477 ntBASIC-0.51□□□□□ -2.49
TPM4P67936 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.51□□□□□ -2.49
TPM4P67936 PCMTD1P1-201ENST00000455560 355 ntBASIC-0.51□□□□□ -2.49
TPM4P67936 RNU6-1208P-201ENST00000459588 107 ntBASIC-0.51□□□□□ -2.49
TPM4P67936 AC093023.1-201ENST00000547375 507 ntBASIC-0.51□□□□□ -2.49
TPM4P67936 AC133485.4-201ENST00000561835 220 ntBASIC-0.51□□□□□ -2.49
TPM4P67936 POLR3GP2-201ENST00000588366 668 ntBASIC-0.51□□□□□ -2.49
TPM4P67936 AC092807.2-201ENST00000609367 243 ntBASIC-0.51□□□□□ -2.49
TPM4P67936 Y_RNA.167-201ENST00000363735 109 ntBASIC-0.52□□□□□ -2.49
TPM4P67936 RNU6-553P-201ENST00000364047 96 ntBASIC-0.52□□□□□ -2.49
TPM4P67936 Y_RNA.226-201ENST00000364337 114 ntBASIC-0.52□□□□□ -2.49
TPM4P67936 RNU4-66P-201ENST00000365199 138 ntBASIC-0.52□□□□□ -2.49
TPM4P67936 RNA5SP117-201ENST00000365294 118 ntBASIC-0.52□□□□□ -2.49
TPM4P67936 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.52□□□□□ -2.49
TPM4P67936 MIR643-201ENST00000385267 97 ntBASIC-0.52□□□□□ -2.49
TPM4P67936 SNORD37.1-201ENST00000390968 65 ntBASIC-0.52□□□□□ -2.49
TPM4P67936 AC005042.3-201ENST00000453230 174 ntBASIC-0.52□□□□□ -2.49
TPM4P67936 RNU7-102P-201ENST00000458948 62 ntBASIC-0.52□□□□□ -2.49
TPM4P67936 RPL23AP54-201ENST00000495129 419 ntBASIC-0.52□□□□□ -2.49
TPM4P67936 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-0.52□□□□□ -2.49
TPM4P67936 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC-0.52□□□□□ -2.49
TPM4P67936 SNORA72.1-201ENST00000363485 129 ntBASIC-0.53□□□□□ -2.49
TPM4P67936 SNORA2A-201ENST00000383885 135 ntBASIC-0.53□□□□□ -2.49
TPM4P67936 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.53□□□□□ -2.49
TPM4P67936 RNU6-747P-201ENST00000390928 104 ntBASIC-0.53□□□□□ -2.49
TPM4P67936 RNU6-241P-201ENST00000391148 104 ntBASIC-0.53□□□□□ -2.49
TPM4P67936 RNU6-447P-201ENST00000410293 104 ntBASIC-0.53□□□□□ -2.49
TPM4P67936 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.53□□□□□ -2.49
TPM4P67936 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.53□□□□□ -2.49
TPM4P67936 RNU6-355P-201ENST00000410427 104 ntBASIC-0.53□□□□□ -2.49
TPM4P67936 RNU6-791P-201ENST00000410467 104 ntBASIC-0.53□□□□□ -2.49
TPM4P67936 RNU6-705P-201ENST00000410601 104 ntBASIC-0.53□□□□□ -2.49
TPM4P67936 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.53□□□□□ -2.49
TPM4P67936 RNU6-860P-201ENST00000410860 104 ntBASIC-0.53□□□□□ -2.49
TPM4P67936 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.53□□□□□ -2.49
TPM4P67936 RNU6-785P-201ENST00000411324 104 ntBASIC-0.53□□□□□ -2.49
TPM4P67936 RNU7-175P-201ENST00000515915 61 ntBASIC-0.53□□□□□ -2.49
TPM4P67936 SNORA25.10-201ENST00000515926 124 ntBASIC-0.53□□□□□ -2.49
TPM4P67936 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.53□□□□□ -2.49
TPM4P67936 U6.90-201ENST00000614007 104 ntBASIC-0.53□□□□□ -2.49
TPM4P67936 AC240442.1-201ENST00000616055 283 ntBASIC-0.53□□□□□ -2.49
TPM4P67936 uc_338.4-201ENST00000616635 176 ntBASIC-0.53□□□□□ -2.49
TPM4P67936 U6.70-201ENST00000620287 104 ntBASIC-0.53□□□□□ -2.49
TPM4P67936 AF246928.1-201ENST00000623768 87 ntBASIC-0.53□□□□□ -2.49
TPM4P67936 AP000720.1-201ENST00000625091 483 ntBASIC-0.53□□□□□ -2.49
TPM4P67936 MTND1P7-201ENST00000632801 297 ntBASIC-0.53□□□□□ -2.49
TPM4P67936 RNY1-201ENST00000364228 113 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 235.7 ms