Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.19□□□□□ -2.06
HOXD12P35452 uc_338.20-201ENST00000621563 178 ntBASIC2.19□□□□□ -2.06
HOXD12P35452 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.19□□□□□ -2.06
HOXD12P35452 AC006435.5-201ENST00000624486 112 ntBASIC2.19□□□□□ -2.06
HOXD12P35452 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
HOXD12P35452 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HOXD12P35452 SNORD114-7-201ENST00000362520 77 ntBASIC2.18□□□□□ -2.06
HOXD12P35452 RNU6-271P-201ENST00000363858 105 ntBASIC2.18□□□□□ -2.06
HOXD12P35452 RNA5SP493-201ENST00000364115 91 ntBASIC2.18□□□□□ -2.06
HOXD12P35452 RNU6-1289P-201ENST00000384431 106 ntBASIC2.18□□□□□ -2.06
HOXD12P35452 Y_RNA.552-201ENST00000384665 112 ntBASIC2.18□□□□□ -2.06
HOXD12P35452 MIR597-201ENST00000384968 97 ntBASIC2.18□□□□□ -2.06
HOXD12P35452 MIR676-201ENST00000390702 67 ntBASIC2.18□□□□□ -2.06
HOXD12P35452 U8.13-201ENST00000390842 128 ntBASIC2.18□□□□□ -2.06
HOXD12P35452 RNU6-855P-201ENST00000410395 104 ntBASIC2.18□□□□□ -2.06
HOXD12P35452 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
HOXD12P35452 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.18□□□□□ -2.06
HOXD12P35452 AC108059.2-201ENST00000434626 151 ntBASIC2.18□□□□□ -2.06
HOXD12P35452 HMGN2P34-201ENST00000437647 269 ntBASIC2.18□□□□□ -2.06
HOXD12P35452 RPL23AP7-203ENST00000449021 469 ntBASIC2.18□□□□□ -2.06
HOXD12P35452 RPS27P22-201ENST00000478056 241 ntBASIC2.18□□□□□ -2.06
HOXD12P35452 AC104435.1-201ENST00000483483 166 ntBASIC2.18□□□□□ -2.06
HOXD12P35452 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.18□□□□□ -2.06
HOXD12P35452 RNU6-1041P-201ENST00000516254 102 ntBASIC2.18□□□□□ -2.06
HOXD12P35452 RNU6-295P-201ENST00000516901 104 ntBASIC2.18□□□□□ -2.06
HOXD12P35452 AL162424.1-201ENST00000602325 221 ntBASIC2.18□□□□□ -2.06
HOXD12P35452 AC009831.4-201ENST00000620744 325 ntBASIC2.18□□□□□ -2.06
HOXD12P35452 AC245060.5-201ENST00000610778 3293 ntBASIC2.18□□□□□ -2.06
HOXD12P35452 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
HOXD12P35452 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.17□□□□□ -2.06
HOXD12P35452 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.17□□□□□ -2.06
HOXD12P35452 AL356292.1-201ENST00000283110 373 ntBASIC2.17□□□□□ -2.06
HOXD12P35452 Y_RNA.269-201ENST00000364685 89 ntBASIC2.17□□□□□ -2.06
HOXD12P35452 RNA5SP338-201ENST00000410495 85 ntBASIC2.17□□□□□ -2.06
HOXD12P35452 RNU2-40P-201ENST00000410833 196 ntBASIC2.17□□□□□ -2.06
HOXD12P35452 RNU6-651P-201ENST00000411040 105 ntBASIC2.17□□□□□ -2.06
HOXD12P35452 RNU6-847P-201ENST00000411115 108 ntBASIC2.17□□□□□ -2.06
HOXD12P35452 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC2.17□□□□□ -2.06
HOXD12P35452 RNU6-1146P-201ENST00000516282 102 ntBASIC2.17□□□□□ -2.06
HOXD12P35452 Y_RNA.679-201ENST00000516416 91 ntBASIC2.17□□□□□ -2.06
HOXD12P35452 SUMO2P18-201ENST00000518873 252 ntBASIC2.17□□□□□ -2.06
HOXD12P35452 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.17□□□□□ -2.06
HOXD12P35452 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.17□□□□□ -2.06
HOXD12P35452 AC141273.2-201ENST00000618989 130 ntBASIC2.17□□□□□ -2.06
HOXD12P35452 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC2.17□□□□□ -2.06
HOXD12P35452 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.17□□□□□ -2.06
HOXD12P35452 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
HOXD12P35452 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.17□□□□□ -2.06
HOXD12P35452 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
HOXD12P35452 Y_RNA.257-201ENST00000364596 102 ntBASIC2.16□□□□□ -2.06
HOXD12P35452 RNA5SP138-201ENST00000365098 114 ntBASIC2.16□□□□□ -2.06
HOXD12P35452 Y_RNA.341-201ENST00000365341 102 ntBASIC2.16□□□□□ -2.06
HOXD12P35452 RNU6-417P-201ENST00000384712 107 ntBASIC2.16□□□□□ -2.06
HOXD12P35452 Y_RNA.590-201ENST00000410140 107 ntBASIC2.16□□□□□ -2.06
HOXD12P35452 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.16□□□□□ -2.06
HOXD12P35452 RPS26P55-201ENST00000471178 356 ntBASIC2.16□□□□□ -2.06
HOXD12P35452 AC010409.1-201ENST00000487382 476 ntBASIC2.16□□□□□ -2.06
HOXD12P35452 RNU6-794P-201ENST00000517261 64 ntBASIC2.16□□□□□ -2.06
HOXD12P35452 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.16□□□□□ -2.06
HOXD12P35452 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
HOXD12P35452 Y_RNA.76-201ENST00000362931 109 ntBASIC2.15□□□□□ -2.07
HOXD12P35452 Y_RNA.122-201ENST00000363331 96 ntBASIC2.15□□□□□ -2.07
HOXD12P35452 RNU6-801P-201ENST00000364087 105 ntBASIC2.15□□□□□ -2.07
HOXD12P35452 Y_RNA.217-201ENST00000364214 105 ntBASIC2.15□□□□□ -2.07
HOXD12P35452 Y_RNA.287-201ENST00000364853 94 ntBASIC2.15□□□□□ -2.07
HOXD12P35452 Y_RNA.515-201ENST00000384535 112 ntBASIC2.15□□□□□ -2.07
HOXD12P35452 SNORD58.1-201ENST00000391313 66 ntBASIC2.15□□□□□ -2.07
HOXD12P35452 RNA5SP501-201ENST00000410990 112 ntBASIC2.15□□□□□ -2.07
HOXD12P35452 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.15□□□□□ -2.07
HOXD12P35452 AL135790.2-201ENST00000437701 267 ntBASIC2.15□□□□□ -2.07
HOXD12P35452 ATP5J2P3-201ENST00000451550 258 ntBASIC2.15□□□□□ -2.07
HOXD12P35452 Y_RNA.641-201ENST00000459414 105 ntBASIC2.15□□□□□ -2.07
HOXD12P35452 RNU6-1337P-201ENST00000516525 95 ntBASIC2.15□□□□□ -2.07
HOXD12P35452 AC136628.3-201ENST00000521868 290 ntBASIC2.15□□□□□ -2.07
HOXD12P35452 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.15□□□□□ -2.07
HOXD12P35452 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.15□□□□□ -2.07
HOXD12P35452 AL137100.2-201ENST00000555786 315 ntBASIC2.15□□□□□ -2.07
HOXD12P35452 MIR4438-201ENST00000585271 93 ntBASIC2.15□□□□□ -2.07
HOXD12P35452 snoU18.1-201ENST00000629629 71 ntBASIC2.15□□□□□ -2.07
HOXD12P35452 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
HOXD12P35452 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
HOXD12P35452 snoU2-30.2-201ENST00000362805 70 ntBASIC2.14□□□□□ -2.07
HOXD12P35452 Y_RNA.172-201ENST00000363765 102 ntBASIC2.14□□□□□ -2.07
HOXD12P35452 Y_RNA.310-201ENST00000365063 113 ntBASIC2.14□□□□□ -2.07
HOXD12P35452 Y_RNA.368-201ENST00000365547 113 ntBASIC2.14□□□□□ -2.07
HOXD12P35452 Y_RNA.456-201ENST00000384232 111 ntBASIC2.14□□□□□ -2.07
HOXD12P35452 AC019129.1-201ENST00000403786 261 ntBASIC2.14□□□□□ -2.07
HOXD12P35452 BTF3P11-201ENST00000426582 477 ntBASIC2.14□□□□□ -2.07
HOXD12P35452 AL445646.1-201ENST00000431784 216 ntBASIC2.14□□□□□ -2.07
HOXD12P35452 HSPE1P13-201ENST00000451143 297 ntBASIC2.14□□□□□ -2.07
HOXD12P35452 RNU4-71P-201ENST00000516258 113 ntBASIC2.14□□□□□ -2.07
HOXD12P35452 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.14□□□□□ -2.07
HOXD12P35452 MIR3169-201ENST00000578032 83 ntBASIC2.14□□□□□ -2.07
HOXD12P35452 MIR4713-201ENST00000582691 75 ntBASIC2.14□□□□□ -2.07
HOXD12P35452 AC005786.1-201ENST00000588553 154 ntBASIC2.14□□□□□ -2.07
HOXD12P35452 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.14□□□□□ -2.07
HOXD12P35452 MIR338-201ENST00000636369 67 ntBASIC2.14□□□□□ -2.07
HOXD12P35452 RNU6-1272P-201ENST00000362776 107 ntBASIC2.13□□□□□ -2.07
HOXD12P35452 Y_RNA.82-201ENST00000363000 102 ntBASIC2.13□□□□□ -2.07
HOXD12P35452 Y_RNA.92-201ENST00000363043 102 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 308.7 ms