Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 SNORD116-13-201ENST00000384408 92 ntBASIC3.37□□□□□ -1.87
NEFMP07197 AL512604.1-201ENST00000404812 257 ntBASIC3.37□□□□□ -1.87
NEFMP07197 RNA5SP181-201ENST00000410246 98 ntBASIC3.37□□□□□ -1.87
NEFMP07197 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.37□□□□□ -1.87
NEFMP07197 RNU6-437P-201ENST00000459408 95 ntBASIC3.37□□□□□ -1.87
NEFMP07197 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.37□□□□□ -1.87
NEFMP07197 RNU2-56P-201ENST00000516826 190 ntBASIC3.37□□□□□ -1.87
NEFMP07197 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.37□□□□□ -1.87
NEFMP07197 AC009487.4-201ENST00000624969 3585 ntBASIC3.37□□□□□ -1.87
NEFMP07197 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.36□□□□□ -1.87
NEFMP07197 MIR449A-201ENST00000362113 91 ntBASIC3.36□□□□□ -1.87
NEFMP07197 SNORD45.3-201ENST00000363836 72 ntBASIC3.36□□□□□ -1.87
NEFMP07197 SNORA68.1-201ENST00000364537 132 ntBASIC3.36□□□□□ -1.87
NEFMP07197 Y_RNA.251-201ENST00000364551 99 ntBASIC3.36□□□□□ -1.87
NEFMP07197 RNU6-1083P-201ENST00000384022 107 ntBASIC3.36□□□□□ -1.87
NEFMP07197 RNU6-588P-201ENST00000410281 105 ntBASIC3.36□□□□□ -1.87
NEFMP07197 RN7SKP101-201ENST00000411376 320 ntBASIC3.36□□□□□ -1.87
NEFMP07197 AL135786.1-201ENST00000415892 214 ntBASIC3.36□□□□□ -1.87
NEFMP07197 RPL23AP54-201ENST00000495129 419 ntBASIC3.36□□□□□ -1.87
NEFMP07197 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC3.36□□□□□ -1.87
NEFMP07197 AC090142.3-201ENST00000519012 385 ntBASIC3.36□□□□□ -1.87
NEFMP07197 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3.36□□□□□ -1.87
NEFMP07197 AC006435.5-201ENST00000624486 112 ntBASIC3.36□□□□□ -1.87
NEFMP07197 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
NEFMP07197 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
NEFMP07197 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NEFMP07197 RNU6-486P-201ENST00000363116 107 ntBASIC3.35□□□□□ -1.87
NEFMP07197 RNU6-674P-201ENST00000363831 107 ntBASIC3.35□□□□□ -1.87
NEFMP07197 RNU6-461P-201ENST00000364195 107 ntBASIC3.35□□□□□ -1.87
NEFMP07197 RNU6-975P-201ENST00000384296 105 ntBASIC3.35□□□□□ -1.87
NEFMP07197 MIR1278-201ENST00000408753 81 ntBASIC3.35□□□□□ -1.87
NEFMP07197 AC245047.4-201ENST00000433189 144 ntBASIC3.35□□□□□ -1.87
NEFMP07197 AL445687.1-201ENST00000439946 251 ntBASIC3.35□□□□□ -1.87
NEFMP07197 SNORD65B-201ENST00000459126 73 ntBASIC3.35□□□□□ -1.87
NEFMP07197 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
NEFMP07197 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
NEFMP07197 MIR6073-201ENST00000352083 89 ntBASIC3.34□□□□□ -1.87
NEFMP07197 RNU6-153P-201ENST00000364422 104 ntBASIC3.34□□□□□ -1.87
NEFMP07197 RNU6-234P-201ENST00000365229 104 ntBASIC3.34□□□□□ -1.87
NEFMP07197 Y_RNA.622-201ENST00000411091 108 ntBASIC3.34□□□□□ -1.87
NEFMP07197 RNU2-55P-201ENST00000411146 174 ntBASIC3.34□□□□□ -1.87
NEFMP07197 AC007064.1-201ENST00000412238 351 ntBASIC3.34□□□□□ -1.87
NEFMP07197 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC3.34□□□□□ -1.87
NEFMP07197 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.34□□□□□ -1.87
NEFMP07197 AC109329.2-201ENST00000519658 482 ntBASIC3.34□□□□□ -1.87
NEFMP07197 AC090049.2-201ENST00000550377 109 ntBASIC3.34□□□□□ -1.87
NEFMP07197 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC3.34□□□□□ -1.87
NEFMP07197 MIR378D2-201ENST00000580636 98 ntBASIC3.34□□□□□ -1.87
NEFMP07197 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC3.34□□□□□ -1.87
NEFMP07197 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC3.34□□□□□ -1.87
NEFMP07197 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
NEFMP07197 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC3.33□□□□□ -1.88
NEFMP07197 AL356292.1-201ENST00000283110 373 ntBASIC3.33□□□□□ -1.88
NEFMP07197 RNU6-915P-201ENST00000364943 103 ntBASIC3.33□□□□□ -1.88
NEFMP07197 SNORD31B-201ENST00000364977 69 ntBASIC3.33□□□□□ -1.88
NEFMP07197 SNORD14D-201ENST00000384390 87 ntBASIC3.33□□□□□ -1.88
NEFMP07197 RNU6-57P-201ENST00000411348 103 ntBASIC3.33□□□□□ -1.88
NEFMP07197 RNA5SP20-201ENST00000515976 84 ntBASIC3.33□□□□□ -1.88
NEFMP07197 RNA5SP320-201ENST00000516263 124 ntBASIC3.33□□□□□ -1.88
NEFMP07197 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NEFMP07197 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
NEFMP07197 RNU4-41P-201ENST00000364426 143 ntBASIC3.32□□□□□ -1.88
NEFMP07197 Y_RNA.584-201ENST00000391090 114 ntBASIC3.32□□□□□ -1.88
NEFMP07197 AC008134.1-201ENST00000420943 193 ntBASIC3.32□□□□□ -1.88
NEFMP07197 AL513328.1-201ENST00000446460 224 ntBASIC3.32□□□□□ -1.88
NEFMP07197 SNRPGP8-201ENST00000454064 226 ntBASIC3.32□□□□□ -1.88
NEFMP07197 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC3.32□□□□□ -1.88
NEFMP07197 YWHAEP4-201ENST00000505390 198 ntBASIC3.32□□□□□ -1.88
NEFMP07197 MIR449C-201ENST00000516047 92 ntBASIC3.32□□□□□ -1.88
NEFMP07197 RNU6-948P-201ENST00000516374 107 ntBASIC3.32□□□□□ -1.88
NEFMP07197 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.32□□□□□ -1.88
NEFMP07197 AL160236.1-201ENST00000556317 195 ntBASIC3.32□□□□□ -1.88
NEFMP07197 Y_RNA.757-201ENST00000578934 114 ntBASIC3.32□□□□□ -1.88
NEFMP07197 MIR3117-201ENST00000584034 78 ntBASIC3.32□□□□□ -1.88
NEFMP07197 AC120024.3-201ENST00000603167 156 ntBASIC3.32□□□□□ -1.88
NEFMP07197 AL137847.3-201ENST00000611521 109 ntBASIC3.32□□□□□ -1.88
NEFMP07197 5S_rRNA.13-201ENST00000622298 123 ntBASIC3.32□□□□□ -1.88
NEFMP07197 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC3.32□□□□□ -1.88
NEFMP07197 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NEFMP07197 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.32□□□□□ -1.88
NEFMP07197 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
NEFMP07197 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC3.31□□□□□ -1.88
NEFMP07197 Z82209.1-201ENST00000422141 2135 ntBASIC3.31□□□□□ -1.88
NEFMP07197 RNU6-1080P-201ENST00000383982 107 ntBASIC3.31□□□□□ -1.88
NEFMP07197 Y_RNA.432-201ENST00000384087 111 ntBASIC3.31□□□□□ -1.88
NEFMP07197 RNU6-1072P-201ENST00000384703 107 ntBASIC3.31□□□□□ -1.88
NEFMP07197 RNU6-443P-201ENST00000384780 107 ntBASIC3.31□□□□□ -1.88
NEFMP07197 Y_RNA.587-201ENST00000391210 103 ntBASIC3.31□□□□□ -1.88
NEFMP07197 RNU6-1064P-201ENST00000410626 104 ntBASIC3.31□□□□□ -1.88
NEFMP07197 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC3.31□□□□□ -1.88
NEFMP07197 TRBV25OR9-2-201ENST00000438417 374 ntBASIC3.31□□□□□ -1.88
NEFMP07197 SCARNA17.1-201ENST00000516211 143 ntBASIC3.31□□□□□ -1.88
NEFMP07197 SCARNA17.2-201ENST00000516334 143 ntBASIC3.31□□□□□ -1.88
NEFMP07197 RNU6-197P-201ENST00000516680 100 ntBASIC3.31□□□□□ -1.88
NEFMP07197 AL021707.8-201ENST00000609428 183 ntBASIC3.31□□□□□ -1.88
NEFMP07197 SCARNA17.4-201ENST00000614296 143 ntBASIC3.31□□□□□ -1.88
NEFMP07197 CTSLP2-204ENST00000629029 392 ntBASIC3.31□□□□□ -1.88
NEFMP07197 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
NEFMP07197 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
NEFMP07197 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms