Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 U6.108-201ENST00000637764 58 ntBASIC2.73□□□□□ -1.97
NPHS1O60500 AC245060.5-201ENST00000610778 3293 ntBASIC2.73□□□□□ -1.97
NPHS1O60500 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NPHS1O60500 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NPHS1O60500 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
NPHS1O60500 Y_RNA.127-201ENST00000363386 109 ntBASIC2.72□□□□□ -1.97
NPHS1O60500 SNORA38.1-201ENST00000364172 131 ntBASIC2.72□□□□□ -1.97
NPHS1O60500 MIR539-201ENST00000365690 78 ntBASIC2.72□□□□□ -1.97
NPHS1O60500 MIR562-201ENST00000384894 95 ntBASIC2.72□□□□□ -1.97
NPHS1O60500 RNU2-70P-201ENST00000410718 179 ntBASIC2.72□□□□□ -1.97
NPHS1O60500 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
NPHS1O60500 AC245047.4-201ENST00000433189 144 ntBASIC2.72□□□□□ -1.97
NPHS1O60500 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.72□□□□□ -1.97
NPHS1O60500 AC233266.1-201ENST00000454518 96 ntBASIC2.72□□□□□ -1.97
NPHS1O60500 SCGB1D5P-201ENST00000515134 247 ntBASIC2.72□□□□□ -1.97
NPHS1O60500 RNU6-1333P-201ENST00000516162 93 ntBASIC2.72□□□□□ -1.97
NPHS1O60500 SCARNA13-201ENST00000516672 275 ntBASIC2.72□□□□□ -1.97
NPHS1O60500 RNU7-149P-201ENST00000516739 59 ntBASIC2.72□□□□□ -1.97
NPHS1O60500 RNU2-56P-201ENST00000516826 190 ntBASIC2.72□□□□□ -1.97
NPHS1O60500 AP001328.1-201ENST00000528550 176 ntBASIC2.72□□□□□ -1.97
NPHS1O60500 AC242852.1-201ENST00000612151 96 ntBASIC2.72□□□□□ -1.97
NPHS1O60500 AL359075.3-201ENST00000613288 217 ntBASIC2.72□□□□□ -1.97
NPHS1O60500 JPX_2.1-201ENST00000614161 69 ntBASIC2.72□□□□□ -1.97
NPHS1O60500 Pinc.1-201ENST00000616452 154 ntBASIC2.72□□□□□ -1.97
NPHS1O60500 TUG1_4.1-201ENST00000619464 181 ntBASIC2.72□□□□□ -1.97
NPHS1O60500 AC244015.1-201ENST00000622301 99 ntBASIC2.72□□□□□ -1.97
NPHS1O60500 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.72□□□□□ -1.97
NPHS1O60500 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.72□□□□□ -1.97
NPHS1O60500 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
NPHS1O60500 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
NPHS1O60500 SNORD46.1-201ENST00000364139 104 ntBASIC2.71□□□□□ -1.98
NPHS1O60500 Y_RNA.634-201ENST00000364811 113 ntBASIC2.71□□□□□ -1.98
NPHS1O60500 AL117342.1-201ENST00000404861 406 ntBASIC2.71□□□□□ -1.98
NPHS1O60500 AC104389.3-201ENST00000445629 235 ntBASIC2.71□□□□□ -1.98
NPHS1O60500 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.71□□□□□ -1.98
NPHS1O60500 YWHAEP4-201ENST00000505390 198 ntBASIC2.71□□□□□ -1.98
NPHS1O60500 AL353149.1-201ENST00000610667 244 ntBASIC2.71□□□□□ -1.98
NPHS1O60500 AC011603.4-201ENST00000611325 277 ntBASIC2.71□□□□□ -1.98
NPHS1O60500 AP001340.1-201ENST00000624405 217 ntBASIC2.71□□□□□ -1.98
NPHS1O60500 MIR6079-201ENST00000635807 62 ntBASIC2.71□□□□□ -1.98
NPHS1O60500 AL161431.1-201ENST00000618966 4205 ntBASIC2.71□□□□□ -1.98
NPHS1O60500 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.7□□□□□ -1.98
NPHS1O60500 RNU6-915P-201ENST00000364943 103 ntBASIC2.7□□□□□ -1.98
NPHS1O60500 SNORD116-14-201ENST00000383894 92 ntBASIC2.7□□□□□ -1.98
NPHS1O60500 SNORD116-17-201ENST00000383929 92 ntBASIC2.7□□□□□ -1.98
NPHS1O60500 SNORD116-15-201ENST00000384445 92 ntBASIC2.7□□□□□ -1.98
NPHS1O60500 RNU6-160P-201ENST00000384591 107 ntBASIC2.7□□□□□ -1.98
NPHS1O60500 SNORD116-19-201ENST00000384729 92 ntBASIC2.7□□□□□ -1.98
NPHS1O60500 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.7□□□□□ -1.98
NPHS1O60500 ATP5J2P3-201ENST00000451550 258 ntBASIC2.7□□□□□ -1.98
NPHS1O60500 NDUFA4P2-201ENST00000489989 244 ntBASIC2.7□□□□□ -1.98
NPHS1O60500 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.7□□□□□ -1.98
NPHS1O60500 RNA5SP153-201ENST00000516498 76 ntBASIC2.7□□□□□ -1.98
NPHS1O60500 AC090142.3-201ENST00000519012 385 ntBASIC2.7□□□□□ -1.98
NPHS1O60500 AL449363.1-201ENST00000617815 186 ntBASIC2.7□□□□□ -1.98
NPHS1O60500 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
NPHS1O60500 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
NPHS1O60500 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
NPHS1O60500 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.69□□□□□ -1.98
NPHS1O60500 SNORA25.7-201ENST00000364375 127 ntBASIC2.69□□□□□ -1.98
NPHS1O60500 RNA5SP205-201ENST00000364653 136 ntBASIC2.69□□□□□ -1.98
NPHS1O60500 Y_RNA.267-201ENST00000364679 109 ntBASIC2.69□□□□□ -1.98
NPHS1O60500 RNU1-109P-201ENST00000383960 147 ntBASIC2.69□□□□□ -1.98
NPHS1O60500 Y_RNA.486-201ENST00000384398 107 ntBASIC2.69□□□□□ -1.98
NPHS1O60500 Y_RNA.584-201ENST00000391090 114 ntBASIC2.69□□□□□ -1.98
NPHS1O60500 RNU1-131P-201ENST00000458943 161 ntBASIC2.69□□□□□ -1.98
NPHS1O60500 OR9P1P-201ENST00000496431 281 ntBASIC2.69□□□□□ -1.98
NPHS1O60500 RNU1-142P-201ENST00000516682 145 ntBASIC2.69□□□□□ -1.98
NPHS1O60500 RNU6-826P-201ENST00000516827 104 ntBASIC2.69□□□□□ -1.98
NPHS1O60500 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.69□□□□□ -1.98
NPHS1O60500 AC097639.2-201ENST00000603159 172 ntBASIC2.69□□□□□ -1.98
NPHS1O60500 U4atac.1-201ENST00000618345 95 ntBASIC2.69□□□□□ -1.98
NPHS1O60500 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
NPHS1O60500 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.69□□□□□ -1.98
NPHS1O60500 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NPHS1O60500 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.68□□□□□ -1.98
NPHS1O60500 SNORD50B-201ENST00000364995 70 ntBASIC2.68□□□□□ -1.98
NPHS1O60500 RNU6-1138P-201ENST00000365359 106 ntBASIC2.68□□□□□ -1.98
NPHS1O60500 AC022018.1-201ENST00000430685 241 ntBASIC2.68□□□□□ -1.98
NPHS1O60500 BX510359.1-201ENST00000456973 237 ntBASIC2.68□□□□□ -1.98
NPHS1O60500 HMGN1P7-201ENST00000491722 313 ntBASIC2.68□□□□□ -1.98
NPHS1O60500 RNU6-341P-201ENST00000516973 96 ntBASIC2.68□□□□□ -1.98
NPHS1O60500 U7.2-201ENST00000607576 63 ntBASIC2.68□□□□□ -1.98
NPHS1O60500 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.68□□□□□ -1.98
NPHS1O60500 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.68□□□□□ -1.98
NPHS1O60500 AL365361.1-201ENST00000566942 3481 ntBASIC2.68□□□□□ -1.98
NPHS1O60500 AC018630.2-201ENST00000534866 2403 ntBASIC2.68□□□□□ -1.98
NPHS1O60500 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.67□□□□□ -1.98
NPHS1O60500 ZNF271P-202ENST00000465539 1970 ntBASIC2.67□□□□□ -1.98
NPHS1O60500 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
NPHS1O60500 RNU6-862P-201ENST00000362804 105 ntBASIC2.67□□□□□ -1.98
NPHS1O60500 RNA5SP493-201ENST00000364115 91 ntBASIC2.67□□□□□ -1.98
NPHS1O60500 Y_RNA.253-201ENST00000364562 112 ntBASIC2.67□□□□□ -1.98
NPHS1O60500 RNU6-80P-201ENST00000384195 107 ntBASIC2.67□□□□□ -1.98
NPHS1O60500 SNORA8-201ENST00000384574 139 ntBASIC2.67□□□□□ -1.98
NPHS1O60500 SNORA12.1-201ENST00000390873 148 ntBASIC2.67□□□□□ -1.98
NPHS1O60500 RNA5SP323-201ENST00000391094 133 ntBASIC2.67□□□□□ -1.98
NPHS1O60500 SNRPGP10-201ENST00000432323 225 ntBASIC2.67□□□□□ -1.98
NPHS1O60500 RN7SL636P-201ENST00000497504 294 ntBASIC2.67□□□□□ -1.98
NPHS1O60500 AC007179.3-201ENST00000604976 235 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 977.2 ms