Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC022784.5-201ENST00000522241 437 ntBASIC-1.17□□□□□ -2.6
CHKB-CPT1BH3BT56 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC-1.17□□□□□ -2.6
CHKB-CPT1BH3BT56 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-1.17□□□□□ -2.6
CHKB-CPT1BH3BT56 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC-1.17□□□□□ -2.6
CHKB-CPT1BH3BT56 MIR4791-201ENST00000607666 84 ntBASIC-1.17□□□□□ -2.6
CHKB-CPT1BH3BT56 MIR196A1-201ENST00000388006 70 ntBASIC-1.18□□□□□ -2.6
CHKB-CPT1BH3BT56 SNORA75.4-201ENST00000391278 119 ntBASIC-1.18□□□□□ -2.6
CHKB-CPT1BH3BT56 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-1.18□□□□□ -2.6
CHKB-CPT1BH3BT56 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC-1.18□□□□□ -2.6
CHKB-CPT1BH3BT56 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-1.18□□□□□ -2.6
CHKB-CPT1BH3BT56 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC-1.18□□□□□ -2.6
CHKB-CPT1BH3BT56 RNU2-69P-201ENST00000516061 100 ntBASIC-1.18□□□□□ -2.6
CHKB-CPT1BH3BT56 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-1.18□□□□□ -2.6
CHKB-CPT1BH3BT56 MTCO3P23-201ENST00000561363 289 ntBASIC-1.18□□□□□ -2.6
CHKB-CPT1BH3BT56 AC068880.4-201ENST00000623082 495 ntBASIC-1.18□□□□□ -2.6
CHKB-CPT1BH3BT56 AC127459.3-201ENST00000624328 466 ntBASIC-1.18□□□□□ -2.6
CHKB-CPT1BH3BT56 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-1.19□□□□□ -2.6
CHKB-CPT1BH3BT56 MTND4P12-201ENST00000498999 1377 ntBASIC-1.19□□□□□ -2.6
CHKB-CPT1BH3BT56 Y_RNA.205-201ENST00000364128 113 ntBASIC-1.19□□□□□ -2.6
CHKB-CPT1BH3BT56 snoU2-30.1-201ENST00000365012 70 ntBASIC-1.19□□□□□ -2.6
CHKB-CPT1BH3BT56 RNU6-413P-201ENST00000384115 107 ntBASIC-1.19□□□□□ -2.6
CHKB-CPT1BH3BT56 RNU6-393P-201ENST00000384475 107 ntBASIC-1.19□□□□□ -2.6
CHKB-CPT1BH3BT56 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.19□□□□□ -2.6
CHKB-CPT1BH3BT56 SNORD115.1-201ENST00000391109 76 ntBASIC-1.19□□□□□ -2.6
CHKB-CPT1BH3BT56 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC-1.19□□□□□ -2.6
CHKB-CPT1BH3BT56 AL138752.1-201ENST00000452964 351 ntBASIC-1.19□□□□□ -2.6
CHKB-CPT1BH3BT56 AC069113.1-201ENST00000517763 267 ntBASIC-1.19□□□□□ -2.6
CHKB-CPT1BH3BT56 AC087685.1-201ENST00000587507 141 ntBASIC-1.19□□□□□ -2.6
CHKB-CPT1BH3BT56 AC063944.3-201ENST00000609969 533 ntBASIC-1.19□□□□□ -2.6
CHKB-CPT1BH3BT56 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-1.19□□□□□ -2.6
CHKB-CPT1BH3BT56 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-1.19□□□□□ -2.6
CHKB-CPT1BH3BT56 MTND5P17-201ENST00000418405 1603 ntBASIC-1.19□□□□□ -2.6
CHKB-CPT1BH3BT56 RNU6-1084P-201ENST00000362498 107 ntBASIC-1.2□□□□□ -2.6
CHKB-CPT1BH3BT56 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.2□□□□□ -2.6
CHKB-CPT1BH3BT56 RNU6-727P-201ENST00000363592 107 ntBASIC-1.2□□□□□ -2.6
CHKB-CPT1BH3BT56 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.2□□□□□ -2.6
CHKB-CPT1BH3BT56 RNU6-434P-201ENST00000384376 107 ntBASIC-1.2□□□□□ -2.6
CHKB-CPT1BH3BT56 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.2□□□□□ -2.6
CHKB-CPT1BH3BT56 ELOCP4-201ENST00000420090 333 ntBASIC-1.2□□□□□ -2.6
CHKB-CPT1BH3BT56 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC-1.2□□□□□ -2.6
CHKB-CPT1BH3BT56 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-1.2□□□□□ -2.6
CHKB-CPT1BH3BT56 RNU6-329P-201ENST00000459618 107 ntBASIC-1.2□□□□□ -2.6
CHKB-CPT1BH3BT56 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-1.2□□□□□ -2.6
CHKB-CPT1BH3BT56 RNU6-830P-201ENST00000516353 107 ntBASIC-1.2□□□□□ -2.6
CHKB-CPT1BH3BT56 RNA5SP66-201ENST00000517178 101 ntBASIC-1.2□□□□□ -2.6
CHKB-CPT1BH3BT56 AC091144.1-201ENST00000519573 138 ntBASIC-1.2□□□□□ -2.6
CHKB-CPT1BH3BT56 AGGF1P4-201ENST00000568249 801 ntBASIC-1.2□□□□□ -2.6
CHKB-CPT1BH3BT56 MIR3684-201ENST00000579779 74 ntBASIC-1.2□□□□□ -2.6
CHKB-CPT1BH3BT56 MIR518F-201ENST00000384973 87 ntBASIC-1.21□□□□□ -2.6
CHKB-CPT1BH3BT56 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-1.21□□□□□ -2.6
CHKB-CPT1BH3BT56 MIR1912-201ENST00000410389 80 ntBASIC-1.21□□□□□ -2.6
CHKB-CPT1BH3BT56 MTND3P9-201ENST00000429526 346 ntBASIC-1.21□□□□□ -2.6
CHKB-CPT1BH3BT56 snoU13.16-201ENST00000459350 104 ntBASIC-1.21□□□□□ -2.6
CHKB-CPT1BH3BT56 AC091179.3-201ENST00000474761 144 ntBASIC-1.21□□□□□ -2.6
CHKB-CPT1BH3BT56 SNORA25.14-201ENST00000516481 132 ntBASIC-1.21□□□□□ -2.6
CHKB-CPT1BH3BT56 MTND1P35-201ENST00000526739 508 ntBASIC-1.21□□□□□ -2.6
CHKB-CPT1BH3BT56 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC-1.21□□□□□ -2.6
CHKB-CPT1BH3BT56 AC013244.3-201ENST00000605614 388 ntBASIC-1.21□□□□□ -2.6
CHKB-CPT1BH3BT56 AC010205.1-201ENST00000616668 449 ntBASIC-1.21□□□□□ -2.6
CHKB-CPT1BH3BT56 AC023510.2-201ENST00000622162 746 ntBASIC-1.21□□□□□ -2.6
CHKB-CPT1BH3BT56 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-1.21□□□□□ -2.6
CHKB-CPT1BH3BT56 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-1.22□□□□□ -2.6
CHKB-CPT1BH3BT56 RNU6-1115P-201ENST00000362490 106 ntBASIC-1.22□□□□□ -2.6
CHKB-CPT1BH3BT56 Y_RNA.97-201ENST00000363094 102 ntBASIC-1.22□□□□□ -2.6
CHKB-CPT1BH3BT56 Y_RNA.123-201ENST00000363338 102 ntBASIC-1.22□□□□□ -2.6
CHKB-CPT1BH3BT56 Y_RNA.368-201ENST00000365547 113 ntBASIC-1.22□□□□□ -2.6
CHKB-CPT1BH3BT56 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-1.22□□□□□ -2.6
CHKB-CPT1BH3BT56 RNU2-13P-201ENST00000515909 113 ntBASIC-1.22□□□□□ -2.6
CHKB-CPT1BH3BT56 RNU6-138P-201ENST00000515952 107 ntBASIC-1.22□□□□□ -2.6
CHKB-CPT1BH3BT56 RNU6-475P-201ENST00000516073 104 ntBASIC-1.22□□□□□ -2.6
CHKB-CPT1BH3BT56 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.22□□□□□ -2.6
CHKB-CPT1BH3BT56 AC108676.2-201ENST00000605225 163 ntBASIC-1.22□□□□□ -2.6
CHKB-CPT1BH3BT56 5S_rRNA.13-201ENST00000622298 123 ntBASIC-1.22□□□□□ -2.6
CHKB-CPT1BH3BT56 AL162376.1-201ENST00000624117 175 ntBASIC-1.22□□□□□ -2.6
CHKB-CPT1BH3BT56 ZNF299P-201ENST00000406845 1804 ntBASIC-1.23□□□□□ -2.61
CHKB-CPT1BH3BT56 SNORD50B-201ENST00000364995 70 ntBASIC-1.23□□□□□ -2.61
CHKB-CPT1BH3BT56 SNORA22B-201ENST00000383876 138 ntBASIC-1.23□□□□□ -2.61
CHKB-CPT1BH3BT56 MIR588-201ENST00000384900 83 ntBASIC-1.23□□□□□ -2.61
CHKB-CPT1BH3BT56 MT-TF-201ENST00000387314 71 ntBASIC-1.23□□□□□ -2.61
CHKB-CPT1BH3BT56 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.23□□□□□ -2.61
CHKB-CPT1BH3BT56 U8.17-201ENST00000391292 132 ntBASIC-1.23□□□□□ -2.61
CHKB-CPT1BH3BT56 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.23□□□□□ -2.61
CHKB-CPT1BH3BT56 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-1.23□□□□□ -2.61
CHKB-CPT1BH3BT56 SCARNA17-201ENST00000516183 144 ntBASIC-1.23□□□□□ -2.61
CHKB-CPT1BH3BT56 RNU6-85P-201ENST00000605989 107 ntBASIC-1.23□□□□□ -2.61
CHKB-CPT1BH3BT56 U6.114-201ENST00000636407 96 ntBASIC-1.23□□□□□ -2.61
CHKB-CPT1BH3BT56 RNA5SP368-201ENST00000364298 116 ntBASIC-1.24□□□□□ -2.61
CHKB-CPT1BH3BT56 RNU6-740P-201ENST00000364734 105 ntBASIC-1.24□□□□□ -2.61
CHKB-CPT1BH3BT56 SNORA1-201ENST00000384107 130 ntBASIC-1.24□□□□□ -2.61
CHKB-CPT1BH3BT56 RNU6-809P-201ENST00000384461 107 ntBASIC-1.24□□□□□ -2.61
CHKB-CPT1BH3BT56 RNU6-136P-201ENST00000384663 107 ntBASIC-1.24□□□□□ -2.61
CHKB-CPT1BH3BT56 SNORD70.1-201ENST00000391007 85 ntBASIC-1.24□□□□□ -2.61
CHKB-CPT1BH3BT56 ERHP2-201ENST00000402323 299 ntBASIC-1.24□□□□□ -2.61
CHKB-CPT1BH3BT56 MTCO2P8-201ENST00000412213 658 ntBASIC-1.24□□□□□ -2.61
CHKB-CPT1BH3BT56 RNU6-758P-201ENST00000516292 89 ntBASIC-1.24□□□□□ -2.61
CHKB-CPT1BH3BT56 RNA5SP169-201ENST00000517268 117 ntBASIC-1.24□□□□□ -2.61
CHKB-CPT1BH3BT56 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-1.24□□□□□ -2.61
CHKB-CPT1BH3BT56 Y_RNA.112-201ENST00000363250 102 ntBASIC-1.25□□□□□ -2.61
CHKB-CPT1BH3BT56 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.25□□□□□ -2.61
CHKB-CPT1BH3BT56 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 186.4 ms