Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 MIR4423-201ENST00000580922 80 ntBASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC091178.2-201ENST00000584401 117 ntBASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 FAM106DP-201ENST00000586416 501 ntBASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC004467.1-201ENST00000615678 330 ntBASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC010205.1-201ENST00000616668 449 ntBASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC007485.1-201ENST00000616755 206 ntBASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC245060.5-201ENST00000610778 3293 ntBASIC1.09□□□□□ -2.23
TMX2-CTNND1H3BSU7 MIR369-201ENST00000362155 70 ntBASIC1.09□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNU6-626P-201ENST00000363354 107 ntBASIC1.09□□□□□ -2.23
TMX2-CTNND1H3BSU7 SNORA72.2-201ENST00000365028 127 ntBASIC1.09□□□□□ -2.23
TMX2-CTNND1H3BSU7 Y_RNA.428-201ENST00000384078 102 ntBASIC1.09□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNU6-20P-201ENST00000384106 107 ntBASIC1.09□□□□□ -2.23
TMX2-CTNND1H3BSU7 Y_RNA.458-201ENST00000384240 102 ntBASIC1.09□□□□□ -2.23
TMX2-CTNND1H3BSU7 MIR613-201ENST00000385248 95 ntBASIC1.09□□□□□ -2.23
TMX2-CTNND1H3BSU7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
TMX2-CTNND1H3BSU7 Y_RNA.645-201ENST00000391229 102 ntBASIC1.09□□□□□ -2.23
TMX2-CTNND1H3BSU7 MIR1253-201ENST00000408273 105 ntBASIC1.09□□□□□ -2.23
TMX2-CTNND1H3BSU7 Y_RNA.605-201ENST00000410577 105 ntBASIC1.09□□□□□ -2.23
TMX2-CTNND1H3BSU7 JTBP1-201ENST00000441314 247 ntBASIC1.09□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC097462.1-201ENST00000514125 324 ntBASIC1.09□□□□□ -2.23
TMX2-CTNND1H3BSU7 RNU6-113P-201ENST00000516653 101 ntBASIC1.09□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC027419.1-201ENST00000522976 328 ntBASIC1.09□□□□□ -2.23
TMX2-CTNND1H3BSU7 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.09□□□□□ -2.23
TMX2-CTNND1H3BSU7 AL137100.2-201ENST00000555786 315 ntBASIC1.09□□□□□ -2.23
TMX2-CTNND1H3BSU7 AC006600.1-201ENST00000572529 153 ntBASIC1.09□□□□□ -2.23
TMX2-CTNND1H3BSU7 MIR4438-201ENST00000585271 93 ntBASIC1.09□□□□□ -2.23
TMX2-CTNND1H3BSU7 AL021879.1-201ENST00000611756 288 ntBASIC1.09□□□□□ -2.23
TMX2-CTNND1H3BSU7 AL359075.3-201ENST00000613288 217 ntBASIC1.09□□□□□ -2.23
TMX2-CTNND1H3BSU7 MIR8074-201ENST00000615081 81 ntBASIC1.09□□□□□ -2.23
TMX2-CTNND1H3BSU7 AL606534.2-204ENST00000635008 178 ntBASIC1.09□□□□□ -2.23
TMX2-CTNND1H3BSU7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
TMX2-CTNND1H3BSU7 SNORD114-7-201ENST00000362520 77 ntBASIC1.08□□□□□ -2.24
TMX2-CTNND1H3BSU7 SNORA70.7-201ENST00000384159 133 ntBASIC1.08□□□□□ -2.24
TMX2-CTNND1H3BSU7 Y_RNA.535-201ENST00000384612 99 ntBASIC1.08□□□□□ -2.24
TMX2-CTNND1H3BSU7 RNU1-78P-201ENST00000391248 165 ntBASIC1.08□□□□□ -2.24
TMX2-CTNND1H3BSU7 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.08□□□□□ -2.24
TMX2-CTNND1H3BSU7 RNU6-1186P-201ENST00000410429 97 ntBASIC1.08□□□□□ -2.24
TMX2-CTNND1H3BSU7 RNU6-130P-201ENST00000411112 103 ntBASIC1.08□□□□□ -2.24
TMX2-CTNND1H3BSU7 AC010154.1-201ENST00000425857 269 ntBASIC1.08□□□□□ -2.24
TMX2-CTNND1H3BSU7 FCF1P4-201ENST00000448326 183 ntBASIC1.08□□□□□ -2.24
TMX2-CTNND1H3BSU7 snoU13.27-201ENST00000459278 104 ntBASIC1.08□□□□□ -2.24
TMX2-CTNND1H3BSU7 AC025465.3-201ENST00000510570 311 ntBASIC1.08□□□□□ -2.24
TMX2-CTNND1H3BSU7 SNORA40.14-201ENST00000516543 86 ntBASIC1.08□□□□□ -2.24
TMX2-CTNND1H3BSU7 RNU1-142P-201ENST00000516682 145 ntBASIC1.08□□□□□ -2.24
TMX2-CTNND1H3BSU7 RNU6-1223P-201ENST00000517124 104 ntBASIC1.08□□□□□ -2.24
TMX2-CTNND1H3BSU7 AC023442.1-201ENST00000531247 422 ntBASIC1.08□□□□□ -2.24
TMX2-CTNND1H3BSU7 AC015688.6-201ENST00000577737 104 ntBASIC1.08□□□□□ -2.24
TMX2-CTNND1H3BSU7 AL929325.1-201ENST00000603096 117 ntBASIC1.08□□□□□ -2.24
TMX2-CTNND1H3BSU7 PART1_1.1-201ENST00000611761 217 ntBASIC1.08□□□□□ -2.24
TMX2-CTNND1H3BSU7 MIR8054-201ENST00000620877 86 ntBASIC1.08□□□□□ -2.24
TMX2-CTNND1H3BSU7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
TMX2-CTNND1H3BSU7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
TMX2-CTNND1H3BSU7 SNORD81.1-201ENST00000363064 77 ntBASIC1.07□□□□□ -2.24
TMX2-CTNND1H3BSU7 Y_RNA.138-201ENST00000363462 102 ntBASIC1.07□□□□□ -2.24
TMX2-CTNND1H3BSU7 Y_RNA.172-201ENST00000363765 102 ntBASIC1.07□□□□□ -2.24
TMX2-CTNND1H3BSU7 MIR520E-201ENST00000384867 87 ntBASIC1.07□□□□□ -2.24
TMX2-CTNND1H3BSU7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
TMX2-CTNND1H3BSU7 RNU6-308P-201ENST00000390957 107 ntBASIC1.07□□□□□ -2.24
TMX2-CTNND1H3BSU7 SNORD78.2-201ENST00000391076 69 ntBASIC1.07□□□□□ -2.24
TMX2-CTNND1H3BSU7 RNA5SP475-201ENST00000410568 110 ntBASIC1.07□□□□□ -2.24
TMX2-CTNND1H3BSU7 RNU5A-5P-201ENST00000411054 116 ntBASIC1.07□□□□□ -2.24
TMX2-CTNND1H3BSU7 MTCO3P19-201ENST00000415864 321 ntBASIC1.07□□□□□ -2.24
TMX2-CTNND1H3BSU7 AC069257.2-201ENST00000441819 155 ntBASIC1.07□□□□□ -2.24
TMX2-CTNND1H3BSU7 MTND4P19-201ENST00000446659 478 ntBASIC1.07□□□□□ -2.24
TMX2-CTNND1H3BSU7 RPS23P4-201ENST00000487908 423 ntBASIC1.07□□□□□ -2.24
TMX2-CTNND1H3BSU7 RNA5SP20-201ENST00000515976 84 ntBASIC1.07□□□□□ -2.24
TMX2-CTNND1H3BSU7 RNA5SP481-201ENST00000516814 122 ntBASIC1.07□□□□□ -2.24
TMX2-CTNND1H3BSU7 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
TMX2-CTNND1H3BSU7 MIR3684-201ENST00000579779 74 ntBASIC1.07□□□□□ -2.24
TMX2-CTNND1H3BSU7 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.07□□□□□ -2.24
TMX2-CTNND1H3BSU7 AC021506.2-201ENST00000612354 169 ntBASIC1.07□□□□□ -2.24
TMX2-CTNND1H3BSU7 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.07□□□□□ -2.24
TMX2-CTNND1H3BSU7 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
TMX2-CTNND1H3BSU7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
TMX2-CTNND1H3BSU7 RNU6-271P-201ENST00000363858 105 ntBASIC1.06□□□□□ -2.24
TMX2-CTNND1H3BSU7 RNY1-201ENST00000364228 113 ntBASIC1.06□□□□□ -2.24
TMX2-CTNND1H3BSU7 SNORD1A-201ENST00000364968 72 ntBASIC1.06□□□□□ -2.24
TMX2-CTNND1H3BSU7 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.06□□□□□ -2.24
TMX2-CTNND1H3BSU7 RNU6-1310P-201ENST00000384153 107 ntBASIC1.06□□□□□ -2.24
TMX2-CTNND1H3BSU7 Y_RNA.570-201ENST00000384750 101 ntBASIC1.06□□□□□ -2.24
TMX2-CTNND1H3BSU7 RNU6-1031P-201ENST00000384773 107 ntBASIC1.06□□□□□ -2.24
TMX2-CTNND1H3BSU7 MIR513A1-201ENST00000385138 129 ntBASIC1.06□□□□□ -2.24
TMX2-CTNND1H3BSU7 MIR873-201ENST00000401120 77 ntBASIC1.06□□□□□ -2.24
TMX2-CTNND1H3BSU7 MIR1302-11-201ENST00000408051 138 ntBASIC1.06□□□□□ -2.24
TMX2-CTNND1H3BSU7 MIR1302-9-201ENST00000408365 138 ntBASIC1.06□□□□□ -2.24
TMX2-CTNND1H3BSU7 MIR1302-10-201ENST00000408734 138 ntBASIC1.06□□□□□ -2.24
TMX2-CTNND1H3BSU7 RNU2-54P-201ENST00000410299 190 ntBASIC1.06□□□□□ -2.24
TMX2-CTNND1H3BSU7 MCFD2P1-201ENST00000417812 300 ntBASIC1.06□□□□□ -2.24
TMX2-CTNND1H3BSU7 RPS26P55-201ENST00000471178 356 ntBASIC1.06□□□□□ -2.24
TMX2-CTNND1H3BSU7 RPS27P22-201ENST00000478056 241 ntBASIC1.06□□□□□ -2.24
TMX2-CTNND1H3BSU7 RNU6-436P-201ENST00000516171 114 ntBASIC1.06□□□□□ -2.24
TMX2-CTNND1H3BSU7 MIR151B-201ENST00000584249 96 ntBASIC1.06□□□□□ -2.24
TMX2-CTNND1H3BSU7 AC022441.3-201ENST00000605737 136 ntBASIC1.06□□□□□ -2.24
TMX2-CTNND1H3BSU7 MIR1302-2-201ENST00000607096 138 ntBASIC1.06□□□□□ -2.24
TMX2-CTNND1H3BSU7 MIR6788-201ENST00000618842 66 ntBASIC1.06□□□□□ -2.24
TMX2-CTNND1H3BSU7 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.06□□□□□ -2.24
TMX2-CTNND1H3BSU7 AL160413.1-201ENST00000622780 310 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms