Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AL355297.2-201ENST00000604792 129 ntBASIC3.53□□□□□ -1.84
PCDHB11Q9Y5F2 RNU6-94P-201ENST00000607728 107 ntBASIC3.53□□□□□ -1.84
PCDHB11Q9Y5F2 U6.98-201ENST00000637157 84 ntBASIC3.53□□□□□ -1.84
PCDHB11Q9Y5F2 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHB11Q9Y5F2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PCDHB11Q9Y5F2 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.53□□□□□ -1.84
PCDHB11Q9Y5F2 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.85
PCDHB11Q9Y5F2 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHB11Q9Y5F2 AL589743.1-201ENST00000551932 2712 ntBASIC3.52□□□□□ -1.85
PCDHB11Q9Y5F2 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHB11Q9Y5F2 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHB11Q9Y5F2 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHB11Q9Y5F2 Y_RNA.198-201ENST00000364013 98 ntBASIC3.52□□□□□ -1.85
PCDHB11Q9Y5F2 RNU6-283P-201ENST00000364788 107 ntBASIC3.52□□□□□ -1.85
PCDHB11Q9Y5F2 MIR591-201ENST00000385290 95 ntBASIC3.52□□□□□ -1.85
PCDHB11Q9Y5F2 MIR802-201ENST00000390235 94 ntBASIC3.52□□□□□ -1.85
PCDHB11Q9Y5F2 AL590004.2-201ENST00000404787 371 ntBASIC3.52□□□□□ -1.85
PCDHB11Q9Y5F2 RPL39P34-201ENST00000477141 156 ntBASIC3.52□□□□□ -1.85
PCDHB11Q9Y5F2 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHB11Q9Y5F2 RNU6-667P-201ENST00000517186 102 ntBASIC3.52□□□□□ -1.85
PCDHB11Q9Y5F2 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.52□□□□□ -1.85
PCDHB11Q9Y5F2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.52□□□□□ -1.85
PCDHB11Q9Y5F2 AC068647.1-201ENST00000489539 2265 ntBASIC3.52□□□□□ -1.85
PCDHB11Q9Y5F2 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
PCDHB11Q9Y5F2 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC3.52□□□□□ -1.85
PCDHB11Q9Y5F2 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHB11Q9Y5F2 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHB11Q9Y5F2 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHB11Q9Y5F2 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PCDHB11Q9Y5F2 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
PCDHB11Q9Y5F2 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHB11Q9Y5F2 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHB11Q9Y5F2 SNORA63.5-201ENST00000363548 123 ntBASIC3.51□□□□□ -1.85
PCDHB11Q9Y5F2 MIR548O-201ENST00000408583 114 ntBASIC3.51□□□□□ -1.85
PCDHB11Q9Y5F2 RNU7-170P-201ENST00000459303 61 ntBASIC3.51□□□□□ -1.85
PCDHB11Q9Y5F2 RNU7-94P-201ENST00000459576 63 ntBASIC3.51□□□□□ -1.85
PCDHB11Q9Y5F2 AC018868.1-201ENST00000491307 315 ntBASIC3.51□□□□□ -1.85
PCDHB11Q9Y5F2 RNA5SP281-201ENST00000516504 135 ntBASIC3.51□□□□□ -1.85
PCDHB11Q9Y5F2 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.51□□□□□ -1.85
PCDHB11Q9Y5F2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHB11Q9Y5F2 AC004486.1-201ENST00000546846 233 ntBASIC3.51□□□□□ -1.85
PCDHB11Q9Y5F2 AC006441.5-201ENST00000612680 209 ntBASIC3.51□□□□□ -1.85
PCDHB11Q9Y5F2 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.51□□□□□ -1.85
PCDHB11Q9Y5F2 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHB11Q9Y5F2 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHB11Q9Y5F2 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHB11Q9Y5F2 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCDHB11Q9Y5F2 SNORA33-201ENST00000363664 130 ntBASIC3.5□□□□□ -1.85
PCDHB11Q9Y5F2 U8.6-201ENST00000364939 135 ntBASIC3.5□□□□□ -1.85
PCDHB11Q9Y5F2 RNU6-1189P-201ENST00000383958 107 ntBASIC3.5□□□□□ -1.85
PCDHB11Q9Y5F2 RNU6-1113P-201ENST00000384348 107 ntBASIC3.5□□□□□ -1.85
PCDHB11Q9Y5F2 MIR515-2-201ENST00000384883 83 ntBASIC3.5□□□□□ -1.85
PCDHB11Q9Y5F2 MIR515-1-201ENST00000384884 83 ntBASIC3.5□□□□□ -1.85
PCDHB11Q9Y5F2 SRIP3-201ENST00000413200 219 ntBASIC3.5□□□□□ -1.85
PCDHB11Q9Y5F2 AC006989.1-201ENST00000427212 131 ntBASIC3.5□□□□□ -1.85
PCDHB11Q9Y5F2 CYCSP4-201ENST00000429682 331 ntBASIC3.5□□□□□ -1.85
PCDHB11Q9Y5F2 RPS29P31-201ENST00000446147 164 ntBASIC3.5□□□□□ -1.85
PCDHB11Q9Y5F2 RNU6-844P-201ENST00000517175 102 ntBASIC3.5□□□□□ -1.85
PCDHB11Q9Y5F2 MIR4738-201ENST00000579134 87 ntBASIC3.5□□□□□ -1.85
PCDHB11Q9Y5F2 XIST_intron.1-201ENST00000619444 68 ntBASIC3.5□□□□□ -1.85
PCDHB11Q9Y5F2 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PCDHB11Q9Y5F2 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.5□□□□□ -1.85
PCDHB11Q9Y5F2 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.5□□□□□ -1.85
PCDHB11Q9Y5F2 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
PCDHB11Q9Y5F2 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.5□□□□□ -1.85
PCDHB11Q9Y5F2 AC091152.2-201ENST00000591628 2569 ntBASIC3.5□□□□□ -1.85
PCDHB11Q9Y5F2 TNPO1P3-201ENST00000436471 2662 ntBASIC3.49□□□□□ -1.85
PCDHB11Q9Y5F2 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
PCDHB11Q9Y5F2 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHB11Q9Y5F2 RNY4P6-201ENST00000363667 96 ntBASIC3.49□□□□□ -1.85
PCDHB11Q9Y5F2 Y_RNA.213-201ENST00000364178 111 ntBASIC3.49□□□□□ -1.85
PCDHB11Q9Y5F2 SNORA2.2-201ENST00000365473 135 ntBASIC3.49□□□□□ -1.85
PCDHB11Q9Y5F2 RNU6-442P-201ENST00000383968 104 ntBASIC3.49□□□□□ -1.85
PCDHB11Q9Y5F2 SNORA8-201ENST00000384574 139 ntBASIC3.49□□□□□ -1.85
PCDHB11Q9Y5F2 RNA5SP323-201ENST00000391094 133 ntBASIC3.49□□□□□ -1.85
PCDHB11Q9Y5F2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHB11Q9Y5F2 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHB11Q9Y5F2 AC006539.3-201ENST00000454258 129 ntBASIC3.49□□□□□ -1.85
PCDHB11Q9Y5F2 BX510359.1-201ENST00000456973 237 ntBASIC3.49□□□□□ -1.85
PCDHB11Q9Y5F2 RNY4P20-201ENST00000516678 93 ntBASIC3.49□□□□□ -1.85
PCDHB11Q9Y5F2 AC024995.1-201ENST00000523014 93 ntBASIC3.49□□□□□ -1.85
PCDHB11Q9Y5F2 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHB11Q9Y5F2 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.49□□□□□ -1.85
PCDHB11Q9Y5F2 MIR4762-201ENST00000585261 75 ntBASIC3.49□□□□□ -1.85
PCDHB11Q9Y5F2 AC005000.2-201ENST00000605468 310 ntBASIC3.49□□□□□ -1.85
PCDHB11Q9Y5F2 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
PCDHB11Q9Y5F2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.49□□□□□ -1.85
PCDHB11Q9Y5F2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.48□□□□□ -1.85
PCDHB11Q9Y5F2 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.48□□□□□ -1.85
PCDHB11Q9Y5F2 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHB11Q9Y5F2 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCDHB11Q9Y5F2 Y_RNA.99-201ENST00000363138 105 ntBASIC3.48□□□□□ -1.85
PCDHB11Q9Y5F2 SNORA38.1-201ENST00000364172 131 ntBASIC3.48□□□□□ -1.85
PCDHB11Q9Y5F2 RNU6-690P-201ENST00000365242 106 ntBASIC3.48□□□□□ -1.85
PCDHB11Q9Y5F2 Y_RNA.362-201ENST00000365518 110 ntBASIC3.48□□□□□ -1.85
PCDHB11Q9Y5F2 MIR181B1-201ENST00000385240 110 ntBASIC3.48□□□□□ -1.85
PCDHB11Q9Y5F2 ATP5J2P3-201ENST00000451550 258 ntBASIC3.48□□□□□ -1.85
PCDHB11Q9Y5F2 RNU1-131P-201ENST00000458943 161 ntBASIC3.48□□□□□ -1.85
PCDHB11Q9Y5F2 AC010401.1-201ENST00000463867 348 ntBASIC3.48□□□□□ -1.85
PCDHB11Q9Y5F2 RN7SL636P-201ENST00000497504 294 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 197.2 ms