Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AL161722.3-201ENST00000605789 2983 ntBASIC1.29□□□□□ -2.2
ATG4BQ9Y4P1 MIR410-201ENST00000362222 80 ntBASIC1.28□□□□□ -2.2
ATG4BQ9Y4P1 Y_RNA.124-201ENST00000363339 93 ntBASIC1.28□□□□□ -2.2
ATG4BQ9Y4P1 Y_RNA.146-201ENST00000363549 102 ntBASIC1.28□□□□□ -2.2
ATG4BQ9Y4P1 SNORA7.1-201ENST00000363750 139 ntBASIC1.28□□□□□ -2.2
ATG4BQ9Y4P1 Y_RNA.428-201ENST00000384078 102 ntBASIC1.28□□□□□ -2.2
ATG4BQ9Y4P1 SNORD78.2-201ENST00000391076 69 ntBASIC1.28□□□□□ -2.2
ATG4BQ9Y4P1 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.28□□□□□ -2.2
ATG4BQ9Y4P1 SNX2P2-201ENST00000424553 323 ntBASIC1.28□□□□□ -2.2
ATG4BQ9Y4P1 AC236972.2-201ENST00000434979 310 ntBASIC1.28□□□□□ -2.2
ATG4BQ9Y4P1 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.28□□□□□ -2.2
ATG4BQ9Y4P1 STAG3L5P-204ENST00000443759 179 ntBASIC1.28□□□□□ -2.2
ATG4BQ9Y4P1 RNU6-1053P-201ENST00000515930 101 ntBASIC1.28□□□□□ -2.2
ATG4BQ9Y4P1 SUMO2P16-201ENST00000519475 264 ntBASIC1.28□□□□□ -2.2
ATG4BQ9Y4P1 AC006600.1-201ENST00000572529 153 ntBASIC1.28□□□□□ -2.2
ATG4BQ9Y4P1 PRR13P7-201ENST00000605538 430 ntBASIC1.28□□□□□ -2.2
ATG4BQ9Y4P1 AL078604.3-201ENST00000615580 211 ntBASIC1.28□□□□□ -2.2
ATG4BQ9Y4P1 Y_RNA.187-201ENST00000363918 113 ntBASIC1.27□□□□□ -2.21
ATG4BQ9Y4P1 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC1.27□□□□□ -2.21
ATG4BQ9Y4P1 RNU6-708P-201ENST00000384217 107 ntBASIC1.27□□□□□ -2.21
ATG4BQ9Y4P1 RNY3P4-201ENST00000384428 101 ntBASIC1.27□□□□□ -2.21
ATG4BQ9Y4P1 RNU6-136P-201ENST00000384663 107 ntBASIC1.27□□□□□ -2.21
ATG4BQ9Y4P1 MIR873-201ENST00000401120 77 ntBASIC1.27□□□□□ -2.21
ATG4BQ9Y4P1 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.27□□□□□ -2.21
ATG4BQ9Y4P1 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.27□□□□□ -2.21
ATG4BQ9Y4P1 AL135790.2-201ENST00000437701 267 ntBASIC1.27□□□□□ -2.21
ATG4BQ9Y4P1 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.27□□□□□ -2.21
ATG4BQ9Y4P1 AC091021.1-201ENST00000468051 388 ntBASIC1.27□□□□□ -2.21
ATG4BQ9Y4P1 SNORD116.3-201ENST00000517176 78 ntBASIC1.27□□□□□ -2.21
ATG4BQ9Y4P1 AC055872.1-201ENST00000570978 278 ntBASIC1.27□□□□□ -2.21
ATG4BQ9Y4P1 AL390123.1-201ENST00000603216 237 ntBASIC1.27□□□□□ -2.21
ATG4BQ9Y4P1 AL359821.1-201ENST00000605519 182 ntBASIC1.27□□□□□ -2.21
ATG4BQ9Y4P1 AL365434.2-201ENST00000607979 234 ntBASIC1.27□□□□□ -2.21
ATG4BQ9Y4P1 AL391987.6-201ENST00000305671 199 ntBASIC1.26□□□□□ -2.21
ATG4BQ9Y4P1 Y_RNA.265-201ENST00000364677 108 ntBASIC1.26□□□□□ -2.21
ATG4BQ9Y4P1 Y_RNA.463-201ENST00000384271 102 ntBASIC1.26□□□□□ -2.21
ATG4BQ9Y4P1 MIR562-201ENST00000384894 95 ntBASIC1.26□□□□□ -2.21
ATG4BQ9Y4P1 MIR150-201ENST00000385048 84 ntBASIC1.26□□□□□ -2.21
ATG4BQ9Y4P1 AL034345.1-201ENST00000407768 123 ntBASIC1.26□□□□□ -2.21
ATG4BQ9Y4P1 RNU6-321P-201ENST00000410912 106 ntBASIC1.26□□□□□ -2.21
ATG4BQ9Y4P1 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC1.26□□□□□ -2.21
ATG4BQ9Y4P1 AL137792.2-201ENST00000443484 235 ntBASIC1.26□□□□□ -2.21
ATG4BQ9Y4P1 CHEK2P4-201ENST00000450340 246 ntBASIC1.26□□□□□ -2.21
ATG4BQ9Y4P1 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.26□□□□□ -2.21
ATG4BQ9Y4P1 RNU6-1278P-201ENST00000516130 107 ntBASIC1.26□□□□□ -2.21
ATG4BQ9Y4P1 RNU6-63P-201ENST00000516690 95 ntBASIC1.26□□□□□ -2.21
ATG4BQ9Y4P1 RNU2-56P-201ENST00000516826 190 ntBASIC1.26□□□□□ -2.21
ATG4BQ9Y4P1 MIR4659A-201ENST00000580269 81 ntBASIC1.26□□□□□ -2.21
ATG4BQ9Y4P1 AL513423.1-201ENST00000621695 132 ntBASIC1.26□□□□□ -2.21
ATG4BQ9Y4P1 AC127459.3-201ENST00000624328 466 ntBASIC1.26□□□□□ -2.21
ATG4BQ9Y4P1 AC138305.3-201ENST00000624988 240 ntBASIC1.26□□□□□ -2.21
ATG4BQ9Y4P1 RNU4-73P-201ENST00000363164 141 ntBASIC1.25□□□□□ -2.21
ATG4BQ9Y4P1 RNU6-20P-201ENST00000384106 107 ntBASIC1.25□□□□□ -2.21
ATG4BQ9Y4P1 MIR758-201ENST00000390227 88 ntBASIC1.25□□□□□ -2.21
ATG4BQ9Y4P1 RPL30P13-201ENST00000418873 348 ntBASIC1.25□□□□□ -2.21
ATG4BQ9Y4P1 AC092473.1-201ENST00000441098 221 ntBASIC1.25□□□□□ -2.21
ATG4BQ9Y4P1 AC233266.1-201ENST00000454518 96 ntBASIC1.25□□□□□ -2.21
ATG4BQ9Y4P1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.25□□□□□ -2.21
ATG4BQ9Y4P1 RNU1-123P-201ENST00000458950 160 ntBASIC1.25□□□□□ -2.21
ATG4BQ9Y4P1 MTND3P22-201ENST00000510932 243 ntBASIC1.25□□□□□ -2.21
ATG4BQ9Y4P1 RNU6-1291P-201ENST00000516591 104 ntBASIC1.25□□□□□ -2.21
ATG4BQ9Y4P1 MIR4795-201ENST00000584182 89 ntBASIC1.25□□□□□ -2.21
ATG4BQ9Y4P1 AC005176.2-201ENST00000596933 147 ntBASIC1.25□□□□□ -2.21
ATG4BQ9Y4P1 AC006380.1-201ENST00000603598 186 ntBASIC1.25□□□□□ -2.21
ATG4BQ9Y4P1 AC242852.1-201ENST00000612151 96 ntBASIC1.25□□□□□ -2.21
ATG4BQ9Y4P1 AC244015.1-201ENST00000622301 99 ntBASIC1.25□□□□□ -2.21
ATG4BQ9Y4P1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
ATG4BQ9Y4P1 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.24□□□□□ -2.21
ATG4BQ9Y4P1 Y_RNA.243-201ENST00000364481 109 ntBASIC1.24□□□□□ -2.21
ATG4BQ9Y4P1 SNORA12.1-201ENST00000390873 148 ntBASIC1.24□□□□□ -2.21
ATG4BQ9Y4P1 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.24□□□□□ -2.21
ATG4BQ9Y4P1 SDAD1P3-201ENST00000427380 333 ntBASIC1.24□□□□□ -2.21
ATG4BQ9Y4P1 SUMO1P2-201ENST00000452524 304 ntBASIC1.24□□□□□ -2.21
ATG4BQ9Y4P1 RPS29P29-201ENST00000456396 171 ntBASIC1.24□□□□□ -2.21
ATG4BQ9Y4P1 RNU7-152P-201ENST00000458982 64 ntBASIC1.24□□□□□ -2.21
ATG4BQ9Y4P1 RPL39P38-201ENST00000467018 153 ntBASIC1.24□□□□□ -2.21
ATG4BQ9Y4P1 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.24□□□□□ -2.21
ATG4BQ9Y4P1 AC004223.1-201ENST00000479840 271 ntBASIC1.24□□□□□ -2.21
ATG4BQ9Y4P1 RNU6-1012P-201ENST00000516606 109 ntBASIC1.24□□□□□ -2.21
ATG4BQ9Y4P1 AL512310.8-201ENST00000550183 120 ntBASIC1.24□□□□□ -2.21
ATG4BQ9Y4P1 AC068338.1-201ENST00000565567 176 ntBASIC1.24□□□□□ -2.21
ATG4BQ9Y4P1 VN1R91P-201ENST00000594377 169 ntBASIC1.24□□□□□ -2.21
ATG4BQ9Y4P1 SNORA28-201ENST00000606769 126 ntBASIC1.24□□□□□ -2.21
ATG4BQ9Y4P1 AC104985.2-201ENST00000620598 500 ntBASIC1.24□□□□□ -2.21
ATG4BQ9Y4P1 AC106754.2-201ENST00000623006 233 ntBASIC1.24□□□□□ -2.21
ATG4BQ9Y4P1 SNORD3E-202ENST00000627253 216 ntBASIC1.24□□□□□ -2.21
ATG4BQ9Y4P1 U6.92-201ENST00000636464 89 ntBASIC1.24□□□□□ -2.21
ATG4BQ9Y4P1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
ATG4BQ9Y4P1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
ATG4BQ9Y4P1 Y_RNA.27-201ENST00000362540 103 ntBASIC1.23□□□□□ -2.21
ATG4BQ9Y4P1 Y_RNA.101-201ENST00000363154 102 ntBASIC1.23□□□□□ -2.21
ATG4BQ9Y4P1 RNU6-626P-201ENST00000363354 107 ntBASIC1.23□□□□□ -2.21
ATG4BQ9Y4P1 RNU6-324P-201ENST00000363957 106 ntBASIC1.23□□□□□ -2.21
ATG4BQ9Y4P1 SNORD115-30-201ENST00000364117 82 ntBASIC1.23□□□□□ -2.21
ATG4BQ9Y4P1 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.23□□□□□ -2.21
ATG4BQ9Y4P1 AC005840.1-201ENST00000498412 377 ntBASIC1.23□□□□□ -2.21
ATG4BQ9Y4P1 TRMT112P2-201ENST00000512910 132 ntBASIC1.23□□□□□ -2.21
ATG4BQ9Y4P1 RNU6-911P-201ENST00000516523 104 ntBASIC1.23□□□□□ -2.21
ATG4BQ9Y4P1 RNU2-12P-201ENST00000517216 168 ntBASIC1.23□□□□□ -2.21
ATG4BQ9Y4P1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 934.8 ms