Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 RNU6-945P-201ENST00000383947 107 ntBASIC0.46□□□□□ -2.34
CCNB1IP1Q9NPC3 RNU6-1145P-201ENST00000384246 107 ntBASIC0.46□□□□□ -2.34
CCNB1IP1Q9NPC3 RNU6-306P-201ENST00000384617 107 ntBASIC0.46□□□□□ -2.34
CCNB1IP1Q9NPC3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
CCNB1IP1Q9NPC3 RNU6-780P-201ENST00000391030 104 ntBASIC0.46□□□□□ -2.34
CCNB1IP1Q9NPC3 PIGPP3-201ENST00000425307 415 ntBASIC0.46□□□□□ -2.34
CCNB1IP1Q9NPC3 EIF1P2-201ENST00000428233 350 ntBASIC0.46□□□□□ -2.34
CCNB1IP1Q9NPC3 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.46□□□□□ -2.34
CCNB1IP1Q9NPC3 PCNPP5-201ENST00000452246 481 ntBASIC0.46□□□□□ -2.34
CCNB1IP1Q9NPC3 AC074133.1-201ENST00000515696 183 ntBASIC0.46□□□□□ -2.34
CCNB1IP1Q9NPC3 Y_RNA.706-201ENST00000516933 99 ntBASIC0.46□□□□□ -2.34
CCNB1IP1Q9NPC3 RNU6-1223P-201ENST00000517124 104 ntBASIC0.46□□□□□ -2.34
CCNB1IP1Q9NPC3 NBR2-204ENST00000587322 63 ntBASIC0.46□□□□□ -2.34
CCNB1IP1Q9NPC3 AL357075.2-201ENST00000614906 189 ntBASIC0.46□□□□□ -2.34
CCNB1IP1Q9NPC3 SNORD114-7-201ENST00000362520 77 ntBASIC0.45□□□□□ -2.34
CCNB1IP1Q9NPC3 RNY3P3-201ENST00000363816 102 ntBASIC0.45□□□□□ -2.34
CCNB1IP1Q9NPC3 U8.5-201ENST00000364528 136 ntBASIC0.45□□□□□ -2.34
CCNB1IP1Q9NPC3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC0.45□□□□□ -2.34
CCNB1IP1Q9NPC3 SUMO1P2-201ENST00000452524 304 ntBASIC0.45□□□□□ -2.34
CCNB1IP1Q9NPC3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.45□□□□□ -2.34
CCNB1IP1Q9NPC3 AC114811.1-201ENST00000507207 168 ntBASIC0.45□□□□□ -2.34
CCNB1IP1Q9NPC3 RN7SKP164-201ENST00000516138 266 ntBASIC0.45□□□□□ -2.34
CCNB1IP1Q9NPC3 RNA5SP220-201ENST00000516298 104 ntBASIC0.45□□□□□ -2.34
CCNB1IP1Q9NPC3 SNORA74.3-201ENST00000517108 154 ntBASIC0.45□□□□□ -2.34
CCNB1IP1Q9NPC3 AC023442.1-201ENST00000531247 422 ntBASIC0.45□□□□□ -2.34
CCNB1IP1Q9NPC3 Z99129.1-201ENST00000612510 255 ntBASIC0.45□□□□□ -2.34
CCNB1IP1Q9NPC3 7SK.10-201ENST00000621414 298 ntBASIC0.45□□□□□ -2.34
CCNB1IP1Q9NPC3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
CCNB1IP1Q9NPC3 MIR1298-201ENST00000408783 112 ntBASIC0.44□□□□□ -2.34
CCNB1IP1Q9NPC3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC0.44□□□□□ -2.34
CCNB1IP1Q9NPC3 AC010486.3-201ENST00000511602 785 ntBASIC0.44□□□□□ -2.34
CCNB1IP1Q9NPC3 RNU7-41P-201ENST00000515917 61 ntBASIC0.44□□□□□ -2.34
CCNB1IP1Q9NPC3 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
CCNB1IP1Q9NPC3 MIR4762-201ENST00000585261 75 ntBASIC0.44□□□□□ -2.34
CCNB1IP1Q9NPC3 Z83818.1-201ENST00000603584 150 ntBASIC0.44□□□□□ -2.34
CCNB1IP1Q9NPC3 MTND5P16-201ENST00000460269 1703 ntBASIC0.44□□□□□ -2.34
CCNB1IP1Q9NPC3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.43□□□□□ -2.34
CCNB1IP1Q9NPC3 AL442644.1-201ENST00000454390 3105 ntBASIC0.43□□□□□ -2.34
CCNB1IP1Q9NPC3 SNORA25.3-201ENST00000363205 127 ntBASIC0.43□□□□□ -2.34
CCNB1IP1Q9NPC3 RNU6-454P-201ENST00000364292 107 ntBASIC0.43□□□□□ -2.34
CCNB1IP1Q9NPC3 RNU6-1297P-201ENST00000384415 104 ntBASIC0.43□□□□□ -2.34
CCNB1IP1Q9NPC3 RNU6-1067P-201ENST00000384752 107 ntBASIC0.43□□□□□ -2.34
CCNB1IP1Q9NPC3 MIR1287-201ENST00000408492 90 ntBASIC0.43□□□□□ -2.34
CCNB1IP1Q9NPC3 RNA5SP247-201ENST00000411181 105 ntBASIC0.43□□□□□ -2.34
CCNB1IP1Q9NPC3 AC114737.2-201ENST00000421583 173 ntBASIC0.43□□□□□ -2.34
CCNB1IP1Q9NPC3 AC244098.3-201ENST00000424803 96 ntBASIC0.43□□□□□ -2.34
CCNB1IP1Q9NPC3 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.43□□□□□ -2.34
CCNB1IP1Q9NPC3 RPS20P10-201ENST00000451209 253 ntBASIC0.43□□□□□ -2.34
CCNB1IP1Q9NPC3 RNU6-229P-201ENST00000516614 102 ntBASIC0.43□□□□□ -2.34
CCNB1IP1Q9NPC3 Y_RNA.704-201ENST00000516851 102 ntBASIC0.43□□□□□ -2.34
CCNB1IP1Q9NPC3 AC036111.3-201ENST00000526389 112 ntBASIC0.43□□□□□ -2.34
CCNB1IP1Q9NPC3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.43□□□□□ -2.34
CCNB1IP1Q9NPC3 AC245008.1-201ENST00000608123 476 ntBASIC0.43□□□□□ -2.34
CCNB1IP1Q9NPC3 AC104260.1-201ENST00000616660 539 ntBASIC0.43□□□□□ -2.34
CCNB1IP1Q9NPC3 MIR6734-201ENST00000621166 68 ntBASIC0.43□□□□□ -2.34
CCNB1IP1Q9NPC3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.42□□□□□ -2.34
CCNB1IP1Q9NPC3 Y_RNA.238-201ENST00000364441 102 ntBASIC0.42□□□□□ -2.34
CCNB1IP1Q9NPC3 AC117470.1-201ENST00000381974 330 ntBASIC0.42□□□□□ -2.34
CCNB1IP1Q9NPC3 MIR520C-201ENST00000385005 87 ntBASIC0.42□□□□□ -2.34
CCNB1IP1Q9NPC3 RNU1-119P-201ENST00000391122 165 ntBASIC0.42□□□□□ -2.34
CCNB1IP1Q9NPC3 RNU6-332P-201ENST00000391193 108 ntBASIC0.42□□□□□ -2.34
CCNB1IP1Q9NPC3 AC092423.1-201ENST00000430165 186 ntBASIC0.42□□□□□ -2.34
CCNB1IP1Q9NPC3 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC0.42□□□□□ -2.34
CCNB1IP1Q9NPC3 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC0.42□□□□□ -2.34
CCNB1IP1Q9NPC3 AC018448.1-201ENST00000552843 316 ntBASIC0.42□□□□□ -2.34
CCNB1IP1Q9NPC3 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.42□□□□□ -2.34
CCNB1IP1Q9NPC3 MIR3942-201ENST00000585264 109 ntBASIC0.42□□□□□ -2.34
CCNB1IP1Q9NPC3 AL136317.1-201ENST00000612653 226 ntBASIC0.42□□□□□ -2.34
CCNB1IP1Q9NPC3 AP000770.2-201ENST00000623694 100 ntBASIC0.42□□□□□ -2.34
CCNB1IP1Q9NPC3 MIR5087-201ENST00000635826 76 ntBASIC0.42□□□□□ -2.34
CCNB1IP1Q9NPC3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.42□□□□□ -2.34
CCNB1IP1Q9NPC3 SNORD68-201ENST00000363214 84 ntBASIC0.41□□□□□ -2.34
CCNB1IP1Q9NPC3 RNA5SP48-201ENST00000363969 126 ntBASIC0.41□□□□□ -2.34
CCNB1IP1Q9NPC3 Y_RNA.226-201ENST00000364337 114 ntBASIC0.41□□□□□ -2.34
CCNB1IP1Q9NPC3 Y_RNA.243-201ENST00000364481 109 ntBASIC0.41□□□□□ -2.34
CCNB1IP1Q9NPC3 Y_RNA.361-201ENST00000365515 120 ntBASIC0.41□□□□□ -2.34
CCNB1IP1Q9NPC3 RNU6-136P-201ENST00000384663 107 ntBASIC0.41□□□□□ -2.34
CCNB1IP1Q9NPC3 RNU6-1105P-201ENST00000384774 107 ntBASIC0.41□□□□□ -2.34
CCNB1IP1Q9NPC3 RNU6-1237P-201ENST00000384777 107 ntBASIC0.41□□□□□ -2.34
CCNB1IP1Q9NPC3 RNU6-63P-201ENST00000516690 95 ntBASIC0.41□□□□□ -2.34
CCNB1IP1Q9NPC3 RNU11-2P-201ENST00000516898 142 ntBASIC0.41□□□□□ -2.34
CCNB1IP1Q9NPC3 MIR5701-3-201ENST00000578890 82 ntBASIC0.41□□□□□ -2.34
CCNB1IP1Q9NPC3 MIR5701-1-201ENST00000585138 82 ntBASIC0.41□□□□□ -2.34
CCNB1IP1Q9NPC3 RNU6-94P-201ENST00000607728 107 ntBASIC0.41□□□□□ -2.34
CCNB1IP1Q9NPC3 MIR5701-2-201ENST00000615634 82 ntBASIC0.41□□□□□ -2.34
CCNB1IP1Q9NPC3 AL591926.4-201ENST00000616895 298 ntBASIC0.41□□□□□ -2.34
CCNB1IP1Q9NPC3 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
CCNB1IP1Q9NPC3 Y_RNA.38-201ENST00000362617 102 ntBASIC0.4□□□□□ -2.35
CCNB1IP1Q9NPC3 RNU6-1059P-201ENST00000363752 98 ntBASIC0.4□□□□□ -2.35
CCNB1IP1Q9NPC3 RNU6-842P-201ENST00000384269 107 ntBASIC0.4□□□□□ -2.35
CCNB1IP1Q9NPC3 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.4□□□□□ -2.35
CCNB1IP1Q9NPC3 SNORD111-201ENST00000408139 94 ntBASIC0.4□□□□□ -2.35
CCNB1IP1Q9NPC3 AL354751.2-201ENST00000415471 210 ntBASIC0.4□□□□□ -2.35
CCNB1IP1Q9NPC3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.4□□□□□ -2.35
CCNB1IP1Q9NPC3 AC092628.1-201ENST00000436250 252 ntBASIC0.4□□□□□ -2.35
CCNB1IP1Q9NPC3 ELOCP24-201ENST00000456370 334 ntBASIC0.4□□□□□ -2.35
CCNB1IP1Q9NPC3 AC067940.1-201ENST00000458411 300 ntBASIC0.4□□□□□ -2.35
CCNB1IP1Q9NPC3 AF235103.2-201ENST00000525753 346 ntBASIC0.4□□□□□ -2.35
CCNB1IP1Q9NPC3 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.4□□□□□ -2.35
CCNB1IP1Q9NPC3 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.4□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 221 ms