Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AL365184.2-201ENST00000431139 435 ntBASIC-1.23□□□□□ -2.61
ABCA3Q99758 FRG2DP-202ENST00000566967 323 ntBASIC-1.23□□□□□ -2.61
ABCA3Q99758 AC121334.2-201ENST00000605387 271 ntBASIC-1.23□□□□□ -2.61
ABCA3Q99758 AC006600.1-201ENST00000572529 153 ntBASIC-1.23□□□□□ -2.61
ABCA3Q99758 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC-1.23□□□□□ -2.61
ABCA3Q99758 MIR5706-201ENST00000579841 80 ntBASIC-1.23□□□□□ -2.61
ABCA3Q99758 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC-1.23□□□□□ -2.61
ABCA3Q99758 AL139022.2-201ENST00000606934 443 ntBASIC-1.23□□□□□ -2.61
ABCA3Q99758 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC-1.23□□□□□ -2.61
ABCA3Q99758 AC022960.3-201ENST00000619794 441 ntBASIC-1.23□□□□□ -2.61
ABCA3Q99758 MIR6514-201ENST00000622549 70 ntBASIC-1.23□□□□□ -2.61
ABCA3Q99758 AC010608.3-201ENST00000625048 527 ntBASIC-1.23□□□□□ -2.61
ABCA3Q99758 SNORD68-201ENST00000363214 84 ntBASIC-1.24□□□□□ -2.61
ABCA3Q99758 AC010486.3-201ENST00000511602 785 ntBASIC-1.24□□□□□ -2.61
ABCA3Q99758 RNA5SP454-201ENST00000517231 127 ntBASIC-1.24□□□□□ -2.61
ABCA3Q99758 AC023442.1-201ENST00000531247 422 ntBASIC-1.24□□□□□ -2.61
ABCA3Q99758 RNU4-16P-201ENST00000364737 141 ntBASIC-1.25□□□□□ -2.61
ABCA3Q99758 RNU6-354P-201ENST00000383862 107 ntBASIC-1.25□□□□□ -2.61
ABCA3Q99758 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.25□□□□□ -2.61
ABCA3Q99758 RNU6-207P-201ENST00000384137 107 ntBASIC-1.25□□□□□ -2.61
ABCA3Q99758 RNU6-610P-201ENST00000384264 107 ntBASIC-1.25□□□□□ -2.61
ABCA3Q99758 MIR15B-201ENST00000385045 98 ntBASIC-1.25□□□□□ -2.61
ABCA3Q99758 SNORA75.1-201ENST00000391130 148 ntBASIC-1.25□□□□□ -2.61
ABCA3Q99758 AC015818.7-201ENST00000428754 109 ntBASIC-1.25□□□□□ -2.61
ABCA3Q99758 MTND1P32-201ENST00000433043 938 ntBASIC-1.25□□□□□ -2.61
ABCA3Q99758 AC087499.7-201ENST00000441958 109 ntBASIC-1.25□□□□□ -2.61
ABCA3Q99758 RNU6-158P-201ENST00000517104 100 ntBASIC-1.25□□□□□ -2.61
ABCA3Q99758 RNU7-172P-201ENST00000517125 64 ntBASIC-1.25□□□□□ -2.61
ABCA3Q99758 AP003168.1-201ENST00000530091 307 ntBASIC-1.25□□□□□ -2.61
ABCA3Q99758 SNORA43.4-201ENST00000629559 138 ntBASIC-1.25□□□□□ -2.61
ABCA3Q99758 RNY4P27-201ENST00000363341 96 ntBASIC-1.26□□□□□ -2.61
ABCA3Q99758 RNU6-137P-201ENST00000363680 108 ntBASIC-1.26□□□□□ -2.61
ABCA3Q99758 RNU6-61P-201ENST00000365528 109 ntBASIC-1.26□□□□□ -2.61
ABCA3Q99758 RNU5A-6P-201ENST00000384136 116 ntBASIC-1.26□□□□□ -2.61
ABCA3Q99758 RNU6-1106P-201ENST00000390845 107 ntBASIC-1.26□□□□□ -2.61
ABCA3Q99758 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC-1.26□□□□□ -2.61
ABCA3Q99758 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-1.26□□□□□ -2.61
ABCA3Q99758 AL358934.1-201ENST00000432346 324 ntBASIC-1.26□□□□□ -2.61
ABCA3Q99758 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC-1.26□□□□□ -2.61
ABCA3Q99758 RNA5SP54-201ENST00000516951 92 ntBASIC-1.26□□□□□ -2.61
ABCA3Q99758 RNU6-201P-201ENST00000517100 61 ntBASIC-1.26□□□□□ -2.61
ABCA3Q99758 MIR3152-201ENST00000579801 74 ntBASIC-1.26□□□□□ -2.61
ABCA3Q99758 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.26□□□□□ -2.61
ABCA3Q99758 RNU6-811P-201ENST00000384069 107 ntBASIC-1.26□□□□□ -2.61
ABCA3Q99758 RNU6-205P-201ENST00000390858 107 ntBASIC-1.26□□□□□ -2.61
ABCA3Q99758 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-1.26□□□□□ -2.61
ABCA3Q99758 AC079140.5-201ENST00000507882 310 ntBASIC-1.26□□□□□ -2.61
ABCA3Q99758 AC046134.1-201ENST00000514454 666 ntBASIC-1.26□□□□□ -2.61
ABCA3Q99758 RNA5SP470-201ENST00000516463 106 ntBASIC-1.26□□□□□ -2.61
ABCA3Q99758 RNU6-551P-201ENST00000516661 103 ntBASIC-1.26□□□□□ -2.61
ABCA3Q99758 RNU6-135P-201ENST00000516769 101 ntBASIC-1.26□□□□□ -2.61
ABCA3Q99758 AC090617.3-201ENST00000573670 475 ntBASIC-1.26□□□□□ -2.61
ABCA3Q99758 MIR4306-201ENST00000583390 91 ntBASIC-1.26□□□□□ -2.61
ABCA3Q99758 RNU6-792P-201ENST00000363490 107 ntBASIC-1.27□□□□□ -2.61
ABCA3Q99758 Y_RNA.537-201ENST00000384626 109 ntBASIC-1.27□□□□□ -2.61
ABCA3Q99758 MIR501-201ENST00000390204 84 ntBASIC-1.27□□□□□ -2.61
ABCA3Q99758 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-1.27□□□□□ -2.61
ABCA3Q99758 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.27□□□□□ -2.61
ABCA3Q99758 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-1.27□□□□□ -2.61
ABCA3Q99758 RNU7-185P-201ENST00000459215 60 ntBASIC-1.27□□□□□ -2.61
ABCA3Q99758 SNORD123-201ENST00000459473 70 ntBASIC-1.27□□□□□ -2.61
ABCA3Q99758 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.28□□□□□ -2.61
ABCA3Q99758 SNORD45.3-201ENST00000363836 72 ntBASIC-1.28□□□□□ -2.61
ABCA3Q99758 MTCO3P19-201ENST00000415864 321 ntBASIC-1.28□□□□□ -2.61
ABCA3Q99758 CALM2P2-201ENST00000428512 440 ntBASIC-1.28□□□□□ -2.61
ABCA3Q99758 AC138749.4-201ENST00000563970 127 ntBASIC-1.28□□□□□ -2.61
ABCA3Q99758 MIR8084-201ENST00000614105 89 ntBASIC-1.28□□□□□ -2.61
ABCA3Q99758 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.29□□□□□ -2.62
ABCA3Q99758 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.29□□□□□ -2.62
ABCA3Q99758 AC022306.2-201ENST00000617563 647 ntBASIC-1.29□□□□□ -2.62
ABCA3Q99758 AC137590.2-201ENST00000619709 240 ntBASIC-1.29□□□□□ -2.62
ABCA3Q99758 RNU6-245P-201ENST00000384020 107 ntBASIC-1.29□□□□□ -2.62
ABCA3Q99758 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.29□□□□□ -2.62
ABCA3Q99758 RNU6-387P-201ENST00000411331 105 ntBASIC-1.29□□□□□ -2.62
ABCA3Q99758 AC092447.3-201ENST00000426027 686 ntBASIC-1.29□□□□□ -2.62
ABCA3Q99758 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-1.29□□□□□ -2.62
ABCA3Q99758 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-1.29□□□□□ -2.62
ABCA3Q99758 AC093023.1-201ENST00000547375 507 ntBASIC-1.29□□□□□ -2.62
ABCA3Q99758 MIR4762-201ENST00000585261 75 ntBASIC-1.29□□□□□ -2.62
ABCA3Q99758 AC073539.2-201ENST00000597113 165 ntBASIC-1.29□□□□□ -2.62
ABCA3Q99758 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.3□□□□□ -2.62
ABCA3Q99758 RNU6-274P-201ENST00000459566 107 ntBASIC-1.3□□□□□ -2.62
ABCA3Q99758 AC040926.1-201ENST00000530195 238 ntBASIC-1.3□□□□□ -2.62
ABCA3Q99758 AC068587.4-201ENST00000533893 186 ntBASIC-1.3□□□□□ -2.62
ABCA3Q99758 AC123904.2-201ENST00000548059 300 ntBASIC-1.3□□□□□ -2.62
ABCA3Q99758 MIR3115-201ENST00000577915 68 ntBASIC-1.3□□□□□ -2.62
ABCA3Q99758 MIR4499-201ENST00000584834 69 ntBASIC-1.3□□□□□ -2.62
ABCA3Q99758 AC072039.2-201ENST00000608883 439 ntBASIC-1.3□□□□□ -2.62
ABCA3Q99758 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC-1.3□□□□□ -2.62
ABCA3Q99758 AC068137.4-201ENST00000638485 296 ntBASIC-1.3□□□□□ -2.62
ABCA3Q99758 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.31□□□□□ -2.62
ABCA3Q99758 SNORD114-25-201ENST00000363742 72 ntBASIC-1.31□□□□□ -2.62
ABCA3Q99758 RNU6-376P-201ENST00000384731 106 ntBASIC-1.31□□□□□ -2.62
ABCA3Q99758 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-1.31□□□□□ -2.62
ABCA3Q99758 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-1.31□□□□□ -2.62
ABCA3Q99758 ZNF736P8Y-201ENST00000451913 669 ntBASIC-1.31□□□□□ -2.62
ABCA3Q99758 SUMO1P2-201ENST00000452524 304 ntBASIC-1.31□□□□□ -2.62
ABCA3Q99758 AC245008.1-201ENST00000608123 476 ntBASIC-1.31□□□□□ -2.62
ABCA3Q99758 AC108747.1-201ENST00000609508 535 ntBASIC-1.31□□□□□ -2.62
ABCA3Q99758 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-1.31□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 191.5 ms