Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 RNU6-625P-201ENST00000459412 107 ntBASIC1.1□□□□□ -2.23
VMP1Q96GC9 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.1□□□□□ -2.23
VMP1Q96GC9 RNU7-30P-201ENST00000516835 62 ntBASIC1.1□□□□□ -2.23
VMP1Q96GC9 AC022868.1-201ENST00000517767 391 ntBASIC1.1□□□□□ -2.23
VMP1Q96GC9 MTND4LP26-201ENST00000518144 282 ntBASIC1.1□□□□□ -2.23
VMP1Q96GC9 AL358944.1-201ENST00000528537 144 ntBASIC1.1□□□□□ -2.23
VMP1Q96GC9 AC242852.1-201ENST00000612151 96 ntBASIC1.1□□□□□ -2.23
VMP1Q96GC9 U6atac.1-201ENST00000616025 117 ntBASIC1.1□□□□□ -2.23
VMP1Q96GC9 AC244015.1-201ENST00000622301 99 ntBASIC1.1□□□□□ -2.23
VMP1Q96GC9 AC091895.1-201ENST00000624494 256 ntBASIC1.1□□□□□ -2.23
VMP1Q96GC9 MIR3674-201ENST00000636576 68 ntBASIC1.1□□□□□ -2.23
VMP1Q96GC9 Y_RNA.404-201ENST00000383978 102 ntBASIC1.09□□□□□ -2.23
VMP1Q96GC9 SNORA80D-201ENST00000384488 135 ntBASIC1.09□□□□□ -2.23
VMP1Q96GC9 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.09□□□□□ -2.23
VMP1Q96GC9 AC116353.2-201ENST00000505332 712 ntBASIC1.09□□□□□ -2.23
VMP1Q96GC9 AC005899.2-201ENST00000584353 90 ntBASIC1.09□□□□□ -2.23
VMP1Q96GC9 MIR4781-201ENST00000585250 76 ntBASIC1.09□□□□□ -2.23
VMP1Q96GC9 PISRT1.1-201ENST00000616930 107 ntBASIC1.09□□□□□ -2.23
VMP1Q96GC9 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC1.09□□□□□ -2.24
VMP1Q96GC9 CASC19-280ENST00000642102 1351 ntBASIC1.08□□□□□ -2.24
VMP1Q96GC9 Y_RNA.279-201ENST00000364763 95 ntBASIC1.08□□□□□ -2.24
VMP1Q96GC9 SNORD114-24-201ENST00000365029 72 ntBASIC1.08□□□□□ -2.24
VMP1Q96GC9 RNU6-53P-201ENST00000365367 106 ntBASIC1.08□□□□□ -2.24
VMP1Q96GC9 RNU5A-5P-201ENST00000411054 116 ntBASIC1.08□□□□□ -2.24
VMP1Q96GC9 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.08□□□□□ -2.24
VMP1Q96GC9 AL591704.2-201ENST00000421658 181 ntBASIC1.08□□□□□ -2.24
VMP1Q96GC9 AC104332.1-201ENST00000440471 797 ntBASIC1.08□□□□□ -2.24
VMP1Q96GC9 LINC01399-202ENST00000458450 244 ntBASIC1.08□□□□□ -2.24
VMP1Q96GC9 SCARNA16.2-201ENST00000516520 172 ntBASIC1.08□□□□□ -2.24
VMP1Q96GC9 AP002001.1-203ENST00000534002 267 ntBASIC1.08□□□□□ -2.24
VMP1Q96GC9 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
VMP1Q96GC9 AL117336.2-201ENST00000602435 335 ntBASIC1.08□□□□□ -2.24
VMP1Q96GC9 AC092794.1-201ENST00000612734 582 ntBASIC1.08□□□□□ -2.24
VMP1Q96GC9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
VMP1Q96GC9 MIRLET7C-201ENST00000362160 84 ntBASIC1.07□□□□□ -2.24
VMP1Q96GC9 Y_RNA.160-201ENST00000363677 92 ntBASIC1.07□□□□□ -2.24
VMP1Q96GC9 Y_RNA.358-201ENST00000365491 99 ntBASIC1.07□□□□□ -2.24
VMP1Q96GC9 RNU6-1310P-201ENST00000384153 107 ntBASIC1.07□□□□□ -2.24
VMP1Q96GC9 RNU6-136P-201ENST00000384663 107 ntBASIC1.07□□□□□ -2.24
VMP1Q96GC9 SNORA75.4-201ENST00000391278 119 ntBASIC1.07□□□□□ -2.24
VMP1Q96GC9 Y_RNA.619-201ENST00000410951 90 ntBASIC1.07□□□□□ -2.24
VMP1Q96GC9 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.07□□□□□ -2.24
VMP1Q96GC9 AC092423.1-201ENST00000430165 186 ntBASIC1.07□□□□□ -2.24
VMP1Q96GC9 U8.22-201ENST00000459141 133 ntBASIC1.07□□□□□ -2.24
VMP1Q96GC9 RPL39P28-201ENST00000465655 155 ntBASIC1.07□□□□□ -2.24
VMP1Q96GC9 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.07□□□□□ -2.24
VMP1Q96GC9 RNU6-307P-201ENST00000516743 106 ntBASIC1.07□□□□□ -2.24
VMP1Q96GC9 AL020996.3-201ENST00000606617 222 ntBASIC1.07□□□□□ -2.24
VMP1Q96GC9 AC092794.2-201ENST00000620933 563 ntBASIC1.07□□□□□ -2.24
VMP1Q96GC9 5S_rRNA.13-201ENST00000622298 123 ntBASIC1.07□□□□□ -2.24
VMP1Q96GC9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
VMP1Q96GC9 RNU6-845P-201ENST00000362578 103 ntBASIC1.06□□□□□ -2.24
VMP1Q96GC9 Y_RNA.124-201ENST00000363339 93 ntBASIC1.06□□□□□ -2.24
VMP1Q96GC9 Y_RNA.164-201ENST00000363709 102 ntBASIC1.06□□□□□ -2.24
VMP1Q96GC9 Y_RNA.166-201ENST00000363730 102 ntBASIC1.06□□□□□ -2.24
VMP1Q96GC9 RNU6-454P-201ENST00000364292 107 ntBASIC1.06□□□□□ -2.24
VMP1Q96GC9 Y_RNA.248-201ENST00000364501 109 ntBASIC1.06□□□□□ -2.24
VMP1Q96GC9 RNU6-117P-201ENST00000365415 107 ntBASIC1.06□□□□□ -2.24
VMP1Q96GC9 Y_RNA.363-201ENST00000365529 113 ntBASIC1.06□□□□□ -2.24
VMP1Q96GC9 Y_RNA.505-201ENST00000384489 102 ntBASIC1.06□□□□□ -2.24
VMP1Q96GC9 MIR200A-201ENST00000384875 90 ntBASIC1.06□□□□□ -2.24
VMP1Q96GC9 Z98949.2-201ENST00000440996 144 ntBASIC1.06□□□□□ -2.24
VMP1Q96GC9 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.06□□□□□ -2.24
VMP1Q96GC9 SNORD124-201ENST00000459577 104 ntBASIC1.06□□□□□ -2.24
VMP1Q96GC9 RPL17P19-201ENST00000489069 552 ntBASIC1.06□□□□□ -2.24
VMP1Q96GC9 AC093852.1-201ENST00000503587 266 ntBASIC1.06□□□□□ -2.24
VMP1Q96GC9 RNU6-1096P-201ENST00000517089 102 ntBASIC1.06□□□□□ -2.24
VMP1Q96GC9 MIR4295-201ENST00000585286 85 ntBASIC1.06□□□□□ -2.24
VMP1Q96GC9 AC005828.6-201ENST00000606610 232 ntBASIC1.06□□□□□ -2.24
VMP1Q96GC9 AC103810.9-201ENST00000606688 112 ntBASIC1.06□□□□□ -2.24
VMP1Q96GC9 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
VMP1Q96GC9 SNORD114-7-201ENST00000362520 77 ntBASIC1.05□□□□□ -2.24
VMP1Q96GC9 RNU4-41P-201ENST00000364426 143 ntBASIC1.05□□□□□ -2.24
VMP1Q96GC9 RNU1-36P-201ENST00000365130 165 ntBASIC1.05□□□□□ -2.24
VMP1Q96GC9 MIR891A-201ENST00000401237 79 ntBASIC1.05□□□□□ -2.24
VMP1Q96GC9 RPL23AP50-201ENST00000434149 455 ntBASIC1.05□□□□□ -2.24
VMP1Q96GC9 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.05□□□□□ -2.24
VMP1Q96GC9 HMGN1P7-201ENST00000491722 313 ntBASIC1.05□□□□□ -2.24
VMP1Q96GC9 SNORA40.9-201ENST00000515895 93 ntBASIC1.05□□□□□ -2.24
VMP1Q96GC9 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.05□□□□□ -2.24
VMP1Q96GC9 Y_RNA.691-201ENST00000516611 103 ntBASIC1.05□□□□□ -2.24
VMP1Q96GC9 FAM106DP-201ENST00000586416 501 ntBASIC1.05□□□□□ -2.24
VMP1Q96GC9 AL669831.3-213ENST00000636676 183 ntBASIC1.05□□□□□ -2.24
VMP1Q96GC9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
VMP1Q96GC9 RNU6-833P-201ENST00000363486 107 ntBASIC1.04□□□□□ -2.24
VMP1Q96GC9 RNU6-318P-201ENST00000384283 103 ntBASIC1.04□□□□□ -2.24
VMP1Q96GC9 MT-TL1-201ENST00000386347 75 ntBASIC1.04□□□□□ -2.24
VMP1Q96GC9 RNU6-876P-201ENST00000391295 104 ntBASIC1.04□□□□□ -2.24
VMP1Q96GC9 Y_RNA.599-201ENST00000410489 109 ntBASIC1.04□□□□□ -2.24
VMP1Q96GC9 RNU4-14P-201ENST00000410858 122 ntBASIC1.04□□□□□ -2.24
VMP1Q96GC9 PDCL2P1-201ENST00000419302 352 ntBASIC1.04□□□□□ -2.24
VMP1Q96GC9 MTND1P2-201ENST00000430604 821 ntBASIC1.04□□□□□ -2.24
VMP1Q96GC9 Y_RNA.635-201ENST00000459041 101 ntBASIC1.04□□□□□ -2.24
VMP1Q96GC9 MTND4P17-201ENST00000470444 350 ntBASIC1.04□□□□□ -2.24
VMP1Q96GC9 AC087343.1-201ENST00000477341 475 ntBASIC1.04□□□□□ -2.24
VMP1Q96GC9 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.04□□□□□ -2.24
VMP1Q96GC9 RNU6-1213P-201ENST00000517075 94 ntBASIC1.04□□□□□ -2.24
VMP1Q96GC9 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.04□□□□□ -2.24
VMP1Q96GC9 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.04□□□□□ -2.24
VMP1Q96GC9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.04□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 250.3 ms