Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 MIR597-201ENST00000384968 97 ntBASIC2.32□□□□□ -2.04
TRIM43Q96BQ3 SNORA40.18-201ENST00000391200 128 ntBASIC2.32□□□□□ -2.04
TRIM43Q96BQ3 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.32□□□□□ -2.04
TRIM43Q96BQ3 SERF1AP1-201ENST00000514575 187 ntBASIC2.32□□□□□ -2.04
TRIM43Q96BQ3 Y_RNA.668-201ENST00000516233 93 ntBASIC2.32□□□□□ -2.04
TRIM43Q96BQ3 AC023157.2-201ENST00000540596 141 ntBASIC2.32□□□□□ -2.04
TRIM43Q96BQ3 MIR4438-201ENST00000585271 93 ntBASIC2.32□□□□□ -2.04
TRIM43Q96BQ3 snoU13.31-201ENST00000607291 104 ntBASIC2.32□□□□□ -2.04
TRIM43Q96BQ3 AC062037.2-201ENST00000610137 73 ntBASIC2.32□□□□□ -2.04
TRIM43Q96BQ3 ZNF355P-201ENST00000427301 3216 ntBASIC2.32□□□□□ -2.04
TRIM43Q96BQ3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.31□□□□□ -2.04
TRIM43Q96BQ3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
TRIM43Q96BQ3 MIR335-201ENST00000362173 94 ntBASIC2.31□□□□□ -2.04
TRIM43Q96BQ3 RNU4-80P-201ENST00000363200 141 ntBASIC2.31□□□□□ -2.04
TRIM43Q96BQ3 Y_RNA.124-201ENST00000363339 93 ntBASIC2.31□□□□□ -2.04
TRIM43Q96BQ3 RNU1-51P-201ENST00000365345 176 ntBASIC2.31□□□□□ -2.04
TRIM43Q96BQ3 Y_RNA.418-201ENST00000384029 102 ntBASIC2.31□□□□□ -2.04
TRIM43Q96BQ3 RNU2-61P-201ENST00000411069 191 ntBASIC2.31□□□□□ -2.04
TRIM43Q96BQ3 SNORD127-201ENST00000458892 86 ntBASIC2.31□□□□□ -2.04
TRIM43Q96BQ3 RPS26P55-201ENST00000471178 356 ntBASIC2.31□□□□□ -2.04
TRIM43Q96BQ3 AC010409.1-201ENST00000487382 476 ntBASIC2.31□□□□□ -2.04
TRIM43Q96BQ3 RNA5SP402-201ENST00000517148 110 ntBASIC2.31□□□□□ -2.04
TRIM43Q96BQ3 SNORA31.25-201ENST00000517242 134 ntBASIC2.31□□□□□ -2.04
TRIM43Q96BQ3 AL512605.2-201ENST00000592972 256 ntBASIC2.31□□□□□ -2.04
TRIM43Q96BQ3 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.31□□□□□ -2.04
TRIM43Q96BQ3 AC012640.5-201ENST00000623897 319 ntBASIC2.31□□□□□ -2.04
TRIM43Q96BQ3 MIR338-201ENST00000636369 67 ntBASIC2.31□□□□□ -2.04
TRIM43Q96BQ3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
TRIM43Q96BQ3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
TRIM43Q96BQ3 RNU1-96P-201ENST00000364163 162 ntBASIC2.3□□□□□ -2.04
TRIM43Q96BQ3 Y_RNA.287-201ENST00000364853 94 ntBASIC2.3□□□□□ -2.04
TRIM43Q96BQ3 Y_RNA.508-201ENST00000384502 114 ntBASIC2.3□□□□□ -2.04
TRIM43Q96BQ3 Y_RNA.518-201ENST00000384552 113 ntBASIC2.3□□□□□ -2.04
TRIM43Q96BQ3 MIR515-2-201ENST00000384883 83 ntBASIC2.3□□□□□ -2.04
TRIM43Q96BQ3 MIR515-1-201ENST00000384884 83 ntBASIC2.3□□□□□ -2.04
TRIM43Q96BQ3 SNORD23.1-201ENST00000408212 104 ntBASIC2.3□□□□□ -2.04
TRIM43Q96BQ3 MIR1283-2-201ENST00000408621 87 ntBASIC2.3□□□□□ -2.04
TRIM43Q96BQ3 RNU2-38P-201ENST00000410856 79 ntBASIC2.3□□□□□ -2.04
TRIM43Q96BQ3 MTCO1P5-201ENST00000433573 344 ntBASIC2.3□□□□□ -2.04
TRIM43Q96BQ3 RNU6-1132P-201ENST00000459214 107 ntBASIC2.3□□□□□ -2.04
TRIM43Q96BQ3 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.3□□□□□ -2.04
TRIM43Q96BQ3 AC110588.1-201ENST00000559699 137 ntBASIC2.3□□□□□ -2.04
TRIM43Q96BQ3 AC007229.1-201ENST00000590455 412 ntBASIC2.3□□□□□ -2.04
TRIM43Q96BQ3 MIR6840-201ENST00000611937 71 ntBASIC2.3□□□□□ -2.04
TRIM43Q96BQ3 Y_RNA.783-201ENST00000613546 102 ntBASIC2.3□□□□□ -2.04
TRIM43Q96BQ3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRIM43Q96BQ3 RNU6-862P-201ENST00000362804 105 ntBASIC2.29□□□□□ -2.04
TRIM43Q96BQ3 Y_RNA.118-201ENST00000363300 101 ntBASIC2.29□□□□□ -2.04
TRIM43Q96BQ3 RNA5SP323-201ENST00000391094 133 ntBASIC2.29□□□□□ -2.04
TRIM43Q96BQ3 AL355497.1-201ENST00000406262 551 ntBASIC2.29□□□□□ -2.04
TRIM43Q96BQ3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.29□□□□□ -2.04
TRIM43Q96BQ3 RNU6-855P-201ENST00000410395 104 ntBASIC2.29□□□□□ -2.04
TRIM43Q96BQ3 Y_RNA.618-201ENST00000410949 107 ntBASIC2.29□□□□□ -2.04
TRIM43Q96BQ3 CST2P1-201ENST00000425770 87 ntBASIC2.29□□□□□ -2.04
TRIM43Q96BQ3 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.29□□□□□ -2.04
TRIM43Q96BQ3 AL359075.3-201ENST00000613288 217 ntBASIC2.29□□□□□ -2.04
TRIM43Q96BQ3 U6.73-201ENST00000619194 103 ntBASIC2.29□□□□□ -2.04
TRIM43Q96BQ3 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
TRIM43Q96BQ3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.29□□□□□ -2.04
TRIM43Q96BQ3 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC2.29□□□□□ -2.04
TRIM43Q96BQ3 Y_RNA.269-201ENST00000364685 89 ntBASIC2.28□□□□□ -2.04
TRIM43Q96BQ3 Y_RNA.355-201ENST00000365462 98 ntBASIC2.28□□□□□ -2.04
TRIM43Q96BQ3 AC019129.1-201ENST00000403786 261 ntBASIC2.28□□□□□ -2.04
TRIM43Q96BQ3 AL117342.1-201ENST00000404861 406 ntBASIC2.28□□□□□ -2.04
TRIM43Q96BQ3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.28□□□□□ -2.04
TRIM43Q96BQ3 RNU6-1186P-201ENST00000410429 97 ntBASIC2.28□□□□□ -2.04
TRIM43Q96BQ3 AL139156.1-201ENST00000412785 841 ntBASIC2.28□□□□□ -2.04
TRIM43Q96BQ3 HSPE1P13-201ENST00000451143 297 ntBASIC2.28□□□□□ -2.04
TRIM43Q96BQ3 RPL39P38-201ENST00000467018 153 ntBASIC2.28□□□□□ -2.04
TRIM43Q96BQ3 AC091959.1-201ENST00000495857 238 ntBASIC2.28□□□□□ -2.04
TRIM43Q96BQ3 RNU6-1278P-201ENST00000516130 107 ntBASIC2.28□□□□□ -2.04
TRIM43Q96BQ3 RNU1-142P-201ENST00000516682 145 ntBASIC2.28□□□□□ -2.04
TRIM43Q96BQ3 RNU7-172P-201ENST00000517125 64 ntBASIC2.28□□□□□ -2.04
TRIM43Q96BQ3 MIR5694-201ENST00000581190 76 ntBASIC2.28□□□□□ -2.04
TRIM43Q96BQ3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.28□□□□□ -2.04
TRIM43Q96BQ3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.27□□□□□ -2.05
TRIM43Q96BQ3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TRIM43Q96BQ3 Y_RNA.14-201ENST00000362415 103 ntBASIC2.27□□□□□ -2.05
TRIM43Q96BQ3 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
TRIM43Q96BQ3 MIR548H3-201ENST00000408771 118 ntBASIC2.27□□□□□ -2.05
TRIM43Q96BQ3 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.27□□□□□ -2.05
TRIM43Q96BQ3 AC097462.1-201ENST00000514125 324 ntBASIC2.27□□□□□ -2.05
TRIM43Q96BQ3 RNA5SP182-201ENST00000516064 82 ntBASIC2.27□□□□□ -2.05
TRIM43Q96BQ3 RNU6-191P-201ENST00000516295 94 ntBASIC2.27□□□□□ -2.05
TRIM43Q96BQ3 RPL21P9-201ENST00000556149 474 ntBASIC2.27□□□□□ -2.05
TRIM43Q96BQ3 AC069114.2-201ENST00000604699 304 ntBASIC2.27□□□□□ -2.05
TRIM43Q96BQ3 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC2.26□□□□□ -2.05
TRIM43Q96BQ3 MIR6073-201ENST00000352083 89 ntBASIC2.26□□□□□ -2.05
TRIM43Q96BQ3 MIR378A-201ENST00000362177 66 ntBASIC2.26□□□□□ -2.05
TRIM43Q96BQ3 RNU1-22P-201ENST00000363334 158 ntBASIC2.26□□□□□ -2.05
TRIM43Q96BQ3 RNU6-457P-201ENST00000363999 107 ntBASIC2.26□□□□□ -2.05
TRIM43Q96BQ3 Y_RNA.341-201ENST00000365341 102 ntBASIC2.26□□□□□ -2.05
TRIM43Q96BQ3 Y_RNA.350-201ENST00000365409 98 ntBASIC2.26□□□□□ -2.05
TRIM43Q96BQ3 RNU6-376P-201ENST00000384731 106 ntBASIC2.26□□□□□ -2.05
TRIM43Q96BQ3 SNORA48.3-201ENST00000391081 134 ntBASIC2.26□□□□□ -2.05
TRIM43Q96BQ3 RNU11-5P-201ENST00000391216 129 ntBASIC2.26□□□□□ -2.05
TRIM43Q96BQ3 RNU6-321P-201ENST00000410912 106 ntBASIC2.26□□□□□ -2.05
TRIM43Q96BQ3 RPL23AP63-201ENST00000498752 471 ntBASIC2.26□□□□□ -2.05
TRIM43Q96BQ3 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.26□□□□□ -2.05
TRIM43Q96BQ3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 216.6 ms