Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 AL391262.2-201ENST00000622466 494 ntBASIC0.24□□□□□ -2.37
LRRC28Q86X40 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.24□□□□□ -2.37
LRRC28Q86X40 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
LRRC28Q86X40 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.23□□□□□ -2.37
LRRC28Q86X40 RNU6-369P-201ENST00000362515 102 ntBASIC0.23□□□□□ -2.37
LRRC28Q86X40 SNORA25.3-201ENST00000363205 127 ntBASIC0.23□□□□□ -2.37
LRRC28Q86X40 Y_RNA.330-201ENST00000365230 109 ntBASIC0.23□□□□□ -2.37
LRRC28Q86X40 RNU6-596P-201ENST00000365395 98 ntBASIC0.23□□□□□ -2.37
LRRC28Q86X40 AC117470.1-201ENST00000381974 330 ntBASIC0.23□□□□□ -2.37
LRRC28Q86X40 RNU6-1067P-201ENST00000384752 107 ntBASIC0.23□□□□□ -2.37
LRRC28Q86X40 MIR193B-201ENST00000384907 83 ntBASIC0.23□□□□□ -2.37
LRRC28Q86X40 MIR329-1-201ENST00000385028 80 ntBASIC0.23□□□□□ -2.37
LRRC28Q86X40 MIR520G-201ENST00000385064 90 ntBASIC0.23□□□□□ -2.37
LRRC28Q86X40 RNU6-1068P-201ENST00000410958 103 ntBASIC0.23□□□□□ -2.37
LRRC28Q86X40 RNU6-177P-201ENST00000411257 104 ntBASIC0.23□□□□□ -2.37
LRRC28Q86X40 RNU6-956P-201ENST00000458868 103 ntBASIC0.23□□□□□ -2.37
LRRC28Q86X40 AC114811.1-201ENST00000507207 168 ntBASIC0.23□□□□□ -2.37
LRRC28Q86X40 RNU6-1114P-201ENST00000516022 107 ntBASIC0.23□□□□□ -2.37
LRRC28Q86X40 Y_RNA.670-201ENST00000516255 105 ntBASIC0.23□□□□□ -2.37
LRRC28Q86X40 SNORA74.3-201ENST00000517108 154 ntBASIC0.23□□□□□ -2.37
LRRC28Q86X40 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC0.23□□□□□ -2.37
LRRC28Q86X40 AF235103.2-201ENST00000525753 346 ntBASIC0.23□□□□□ -2.37
LRRC28Q86X40 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.23□□□□□ -2.37
LRRC28Q86X40 AC023442.1-201ENST00000531247 422 ntBASIC0.23□□□□□ -2.37
LRRC28Q86X40 AC010620.1-201ENST00000601088 1102 ntBASIC0.23□□□□□ -2.37
LRRC28Q86X40 DLEU2_1.1-201ENST00000612089 120 ntBASIC0.23□□□□□ -2.37
LRRC28Q86X40 DLEU2_1.2-201ENST00000614667 120 ntBASIC0.23□□□□□ -2.37
LRRC28Q86X40 7SK.10-201ENST00000621414 298 ntBASIC0.23□□□□□ -2.37
LRRC28Q86X40 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.23□□□□□ -2.37
LRRC28Q86X40 U6.115-201ENST00000636045 103 ntBASIC0.23□□□□□ -2.37
LRRC28Q86X40 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.23□□□□□ -2.37
LRRC28Q86X40 AC073544.1-201ENST00000600110 1595 ntBASIC0.23□□□□□ -2.37
LRRC28Q86X40 SNORD114-7-201ENST00000362520 77 ntBASIC0.22□□□□□ -2.37
LRRC28Q86X40 RNU6-595P-201ENST00000363944 107 ntBASIC0.22□□□□□ -2.37
LRRC28Q86X40 RNU6-454P-201ENST00000364292 107 ntBASIC0.22□□□□□ -2.37
LRRC28Q86X40 RNU6-407P-201ENST00000365280 104 ntBASIC0.22□□□□□ -2.37
LRRC28Q86X40 Y_RNA.481-201ENST00000384373 102 ntBASIC0.22□□□□□ -2.37
LRRC28Q86X40 Y_RNA.533-201ENST00000384596 114 ntBASIC0.22□□□□□ -2.37
LRRC28Q86X40 Y_RNA.553-201ENST00000384670 102 ntBASIC0.22□□□□□ -2.37
LRRC28Q86X40 RNU6-376P-201ENST00000384731 106 ntBASIC0.22□□□□□ -2.37
LRRC28Q86X40 MIR452-201ENST00000385020 85 ntBASIC0.22□□□□□ -2.37
LRRC28Q86X40 MIR873-201ENST00000401120 77 ntBASIC0.22□□□□□ -2.37
LRRC28Q86X40 MTCYBP4-201ENST00000401524 249 ntBASIC0.22□□□□□ -2.37
LRRC28Q86X40 MIR1298-201ENST00000408783 112 ntBASIC0.22□□□□□ -2.37
LRRC28Q86X40 RNU6-1001P-201ENST00000411265 100 ntBASIC0.22□□□□□ -2.37
LRRC28Q86X40 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.22□□□□□ -2.37
LRRC28Q86X40 PIGPP3-201ENST00000425307 415 ntBASIC0.22□□□□□ -2.37
LRRC28Q86X40 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.22□□□□□ -2.37
LRRC28Q86X40 MTATP6P13-201ENST00000438531 667 ntBASIC0.22□□□□□ -2.37
LRRC28Q86X40 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC0.22□□□□□ -2.37
LRRC28Q86X40 RNU6-1278P-201ENST00000516130 107 ntBASIC0.22□□□□□ -2.37
LRRC28Q86X40 Y_RNA.693-201ENST00000516641 110 ntBASIC0.22□□□□□ -2.37
LRRC28Q86X40 RNU6-1096P-201ENST00000517089 102 ntBASIC0.22□□□□□ -2.37
LRRC28Q86X40 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC0.22□□□□□ -2.37
LRRC28Q86X40 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC0.22□□□□□ -2.37
LRRC28Q86X40 MIR3672-201ENST00000584290 82 ntBASIC0.22□□□□□ -2.37
LRRC28Q86X40 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.22□□□□□ -2.37
LRRC28Q86X40 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.22□□□□□ -2.37
LRRC28Q86X40 MIRLET7D-201ENST00000362263 87 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 RNU6-222P-201ENST00000362438 107 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 Y_RNA.212-201ENST00000364177 102 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 Y_RNA.256-201ENST00000364594 104 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 Y_RNA.405-201ENST00000383979 100 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 Y_RNA.451-201ENST00000384200 100 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 RNU6-1145P-201ENST00000384246 107 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 Y_RNA.524-201ENST00000384564 100 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 Y_RNA.561-201ENST00000384694 100 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 DEFB108C-201ENST00000400154 252 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 SNORD111-201ENST00000408139 94 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 RNU6-908P-201ENST00000410160 94 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 EIF1P2-201ENST00000428233 350 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 PCNPP5-201ENST00000452246 481 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 AC108740.1-201ENST00000498629 225 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 ACA59.1-201ENST00000515966 143 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 RNU11-2P-201ENST00000516898 142 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC0.21□□□□□ -2.38
LRRC28Q86X40 AC093023.1-201ENST00000547375 507 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 MIR1273G-201ENST00000577677 100 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 AC011195.1-201ENST00000578177 177 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 MIR4764-201ENST00000580680 88 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 AC010525.2-201ENST00000590920 195 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 AC121247.2-201ENST00000604776 136 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 Z69908.1-201ENST00000622603 247 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 AC127459.3-201ENST00000624328 466 ntBASIC0.21□□□□□ -2.38
LRRC28Q86X40 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.21□□□□□ -2.38
LRRC28Q86X40 MTND5P26-201ENST00000426018 1752 ntBASIC0.2□□□□□ -2.38
LRRC28Q86X40 RNA5SP48-201ENST00000363969 126 ntBASIC0.2□□□□□ -2.38
LRRC28Q86X40 RNU6-654P-201ENST00000364373 107 ntBASIC0.2□□□□□ -2.38
LRRC28Q86X40 Y_RNA.359-201ENST00000365498 102 ntBASIC0.2□□□□□ -2.38
LRRC28Q86X40 Y_RNA.490-201ENST00000384413 102 ntBASIC0.2□□□□□ -2.38
LRRC28Q86X40 RNU2-70P-201ENST00000410718 179 ntBASIC0.2□□□□□ -2.38
LRRC28Q86X40 Y_RNA.615-201ENST00000410769 117 ntBASIC0.2□□□□□ -2.38
LRRC28Q86X40 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.2□□□□□ -2.38
LRRC28Q86X40 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.2□□□□□ -2.38
LRRC28Q86X40 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC0.2□□□□□ -2.38
LRRC28Q86X40 ZNF519P2-201ENST00000557032 169 ntBASIC0.2□□□□□ -2.38
LRRC28Q86X40 AC119751.7-201ENST00000600494 245 ntBASIC0.2□□□□□ -2.38
LRRC28Q86X40 AC124303.1-201ENST00000605703 360 ntBASIC0.2□□□□□ -2.38
LRRC28Q86X40 AC092954.2-201ENST00000609103 430 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 202.5 ms