Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC006254.2-201ENST00000603259 279 ntBASIC2.97□□□□□ -1.93
EPHB3P54753 AC004832.5-201ENST00000608677 401 ntBASIC2.97□□□□□ -1.93
EPHB3P54753 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
EPHB3P54753 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
EPHB3P54753 AL136360.1-201ENST00000503377 1900 ntBASIC2.97□□□□□ -1.93
EPHB3P54753 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
EPHB3P54753 FAM35CP-201ENST00000554755 2470 ntBASIC2.96□□□□□ -1.94
EPHB3P54753 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.96□□□□□ -1.94
EPHB3P54753 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
EPHB3P54753 Y_RNA.35-201ENST00000362601 101 ntBASIC2.96□□□□□ -1.94
EPHB3P54753 RNU6-1164P-201ENST00000364428 107 ntBASIC2.96□□□□□ -1.94
EPHB3P54753 RNU6-117P-201ENST00000365415 107 ntBASIC2.96□□□□□ -1.94
EPHB3P54753 RNU6-975P-201ENST00000384296 105 ntBASIC2.96□□□□□ -1.94
EPHB3P54753 MIRLET7F2-201ENST00000385277 83 ntBASIC2.96□□□□□ -1.94
EPHB3P54753 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.96□□□□□ -1.94
EPHB3P54753 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.96□□□□□ -1.94
EPHB3P54753 SNORD109B-201ENST00000458961 67 ntBASIC2.96□□□□□ -1.94
EPHB3P54753 SNORD109A-201ENST00000459128 67 ntBASIC2.96□□□□□ -1.94
EPHB3P54753 RPS26P45-201ENST00000471748 340 ntBASIC2.96□□□□□ -1.94
EPHB3P54753 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.96□□□□□ -1.94
EPHB3P54753 RNA5SP385-201ENST00000515947 110 ntBASIC2.96□□□□□ -1.94
EPHB3P54753 SNORD77.4-201ENST00000516158 81 ntBASIC2.96□□□□□ -1.94
EPHB3P54753 RN7SKP43-201ENST00000516173 320 ntBASIC2.96□□□□□ -1.94
EPHB3P54753 RNU6-1061P-201ENST00000516530 99 ntBASIC2.96□□□□□ -1.94
EPHB3P54753 Y_RNA.694-201ENST00000516677 117 ntBASIC2.96□□□□□ -1.94
EPHB3P54753 AC015720.1-201ENST00000565251 277 ntBASIC2.96□□□□□ -1.94
EPHB3P54753 MIR4753-201ENST00000585119 83 ntBASIC2.96□□□□□ -1.94
EPHB3P54753 AC006435.5-201ENST00000624486 112 ntBASIC2.96□□□□□ -1.94
EPHB3P54753 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
EPHB3P54753 AC009487.4-201ENST00000624969 3585 ntBASIC2.96□□□□□ -1.94
EPHB3P54753 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
EPHB3P54753 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.95□□□□□ -1.94
EPHB3P54753 MIR449A-201ENST00000362113 91 ntBASIC2.95□□□□□ -1.94
EPHB3P54753 RNU6-647P-201ENST00000364243 107 ntBASIC2.95□□□□□ -1.94
EPHB3P54753 SNORA72-201ENST00000384339 132 ntBASIC2.95□□□□□ -1.94
EPHB3P54753 MIR196B-201ENST00000384852 84 ntBASIC2.95□□□□□ -1.94
EPHB3P54753 MIR548A3-201ENST00000385297 97 ntBASIC2.95□□□□□ -1.94
EPHB3P54753 AL138827.1-201ENST00000402666 306 ntBASIC2.95□□□□□ -1.94
EPHB3P54753 AL109933.2-201ENST00000452651 260 ntBASIC2.95□□□□□ -1.94
EPHB3P54753 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.95□□□□□ -1.94
EPHB3P54753 AC079600.2-201ENST00000550076 130 ntBASIC2.95□□□□□ -1.94
EPHB3P54753 AL049861.1-201ENST00000603130 150 ntBASIC2.95□□□□□ -1.94
EPHB3P54753 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.95□□□□□ -1.94
EPHB3P54753 UCA1.1-201ENST00000620952 75 ntBASIC2.95□□□□□ -1.94
EPHB3P54753 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.95□□□□□ -1.94
EPHB3P54753 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.94□□□□□ -1.94
EPHB3P54753 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
EPHB3P54753 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.94□□□□□ -1.94
EPHB3P54753 MIR148B-201ENST00000362252 99 ntBASIC2.94□□□□□ -1.94
EPHB3P54753 SNORD14D-201ENST00000384390 87 ntBASIC2.94□□□□□ -1.94
EPHB3P54753 MIR512-1-201ENST00000384913 84 ntBASIC2.94□□□□□ -1.94
EPHB3P54753 MIR9-1-201ENST00000385198 89 ntBASIC2.94□□□□□ -1.94
EPHB3P54753 RN7SKP123-201ENST00000410732 291 ntBASIC2.94□□□□□ -1.94
EPHB3P54753 AC097463.2-201ENST00000421074 142 ntBASIC2.94□□□□□ -1.94
EPHB3P54753 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.94□□□□□ -1.94
EPHB3P54753 AC108938.1-201ENST00000451204 136 ntBASIC2.94□□□□□ -1.94
EPHB3P54753 RNU7-14P-201ENST00000459331 62 ntBASIC2.94□□□□□ -1.94
EPHB3P54753 Y_RNA.690-201ENST00000516603 95 ntBASIC2.94□□□□□ -1.94
EPHB3P54753 RNU6-63P-201ENST00000516690 95 ntBASIC2.94□□□□□ -1.94
EPHB3P54753 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.94□□□□□ -1.94
EPHB3P54753 MIR4298-201ENST00000584380 73 ntBASIC2.94□□□□□ -1.94
EPHB3P54753 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.94□□□□□ -1.94
EPHB3P54753 uc_338.4-201ENST00000616635 176 ntBASIC2.94□□□□□ -1.94
EPHB3P54753 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.94□□□□□ -1.94
EPHB3P54753 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.94□□□□□ -1.94
EPHB3P54753 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.94□□□□□ -1.94
EPHB3P54753 Y_RNA.634-201ENST00000364811 113 ntBASIC2.93□□□□□ -1.94
EPHB3P54753 RNU6-880P-201ENST00000384526 107 ntBASIC2.93□□□□□ -1.94
EPHB3P54753 RNA5SP511-201ENST00000410487 115 ntBASIC2.93□□□□□ -1.94
EPHB3P54753 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.93□□□□□ -1.94
EPHB3P54753 AC245166.1-201ENST00000521012 253 ntBASIC2.93□□□□□ -1.94
EPHB3P54753 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
EPHB3P54753 RNU6-859P-201ENST00000362728 107 ntBASIC2.92□□□□□ -1.94
EPHB3P54753 Y_RNA.91-201ENST00000363042 107 ntBASIC2.92□□□□□ -1.94
EPHB3P54753 SNORD18B-201ENST00000365659 72 ntBASIC2.92□□□□□ -1.94
EPHB3P54753 RNU2-70P-201ENST00000410718 179 ntBASIC2.92□□□□□ -1.94
EPHB3P54753 RNA5SP21-201ENST00000410917 96 ntBASIC2.92□□□□□ -1.94
EPHB3P54753 RNU6-57P-201ENST00000411348 103 ntBASIC2.92□□□□□ -1.94
EPHB3P54753 AC245102.2-201ENST00000448956 180 ntBASIC2.92□□□□□ -1.94
EPHB3P54753 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.92□□□□□ -1.94
EPHB3P54753 SEM1P1-201ENST00000506694 209 ntBASIC2.92□□□□□ -1.94
EPHB3P54753 RN7SKP19-201ENST00000516016 252 ntBASIC2.92□□□□□ -1.94
EPHB3P54753 RNU6-781P-201ENST00000516377 101 ntBASIC2.92□□□□□ -1.94
EPHB3P54753 RN7SKP282-201ENST00000516824 299 ntBASIC2.92□□□□□ -1.94
EPHB3P54753 AC109329.2-201ENST00000519658 482 ntBASIC2.92□□□□□ -1.94
EPHB3P54753 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.92□□□□□ -1.94
EPHB3P54753 MIR2681-201ENST00000581814 105 ntBASIC2.92□□□□□ -1.94
EPHB3P54753 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.92□□□□□ -1.94
EPHB3P54753 AC008264.2-201ENST00000610193 3731 ntBASIC2.92□□□□□ -1.94
EPHB3P54753 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
EPHB3P54753 RNU4-13P-201ENST00000364019 141 ntBASIC2.91□□□□□ -1.94
EPHB3P54753 Y_RNA.203-201ENST00000364106 102 ntBASIC2.91□□□□□ -1.94
EPHB3P54753 RNU1-112P-201ENST00000364401 164 ntBASIC2.91□□□□□ -1.94
EPHB3P54753 SNORD31B-201ENST00000364977 69 ntBASIC2.91□□□□□ -1.94
EPHB3P54753 RNU6-234P-201ENST00000365229 104 ntBASIC2.91□□□□□ -1.94
EPHB3P54753 MIR1294-201ENST00000408503 142 ntBASIC2.91□□□□□ -1.94
EPHB3P54753 SNORD11-201ENST00000459124 84 ntBASIC2.91□□□□□ -1.94
EPHB3P54753 ATP5EP1-201ENST00000510257 156 ntBASIC2.91□□□□□ -1.94
EPHB3P54753 AC025647.1-201ENST00000517879 253 ntBASIC2.91□□□□□ -1.94
EPHB3P54753 AC024614.2-201ENST00000577584 372 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 215.3 ms