Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.38□□□□□ -1.87
PTPRAP18433 RNU6-781P-201ENST00000516377 101 ntBASIC3.38□□□□□ -1.87
PTPRAP18433 RNU7-149P-201ENST00000516739 59 ntBASIC3.38□□□□□ -1.87
PTPRAP18433 AC011604.1-201ENST00000545978 196 ntBASIC3.38□□□□□ -1.87
PTPRAP18433 XIST_intron.1-201ENST00000619444 68 ntBASIC3.38□□□□□ -1.87
PTPRAP18433 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTPRAP18433 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTPRAP18433 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC3.38□□□□□ -1.87
PTPRAP18433 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTPRAP18433 RNU6-647P-201ENST00000364243 107 ntBASIC3.37□□□□□ -1.87
PTPRAP18433 MIR562-201ENST00000384894 95 ntBASIC3.37□□□□□ -1.87
PTPRAP18433 Y_RNA.617-201ENST00000410920 90 ntBASIC3.37□□□□□ -1.87
PTPRAP18433 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.37□□□□□ -1.87
PTPRAP18433 SNORD109B-201ENST00000458961 67 ntBASIC3.37□□□□□ -1.87
PTPRAP18433 SNORD109A-201ENST00000459128 67 ntBASIC3.37□□□□□ -1.87
PTPRAP18433 RNU2-34P-201ENST00000516534 121 ntBASIC3.37□□□□□ -1.87
PTPRAP18433 RNA5SP490-201ENST00000517141 136 ntBASIC3.37□□□□□ -1.87
PTPRAP18433 PRELID2P1-201ENST00000552837 301 ntBASIC3.37□□□□□ -1.87
PTPRAP18433 Pinc.1-201ENST00000616452 154 ntBASIC3.37□□□□□ -1.87
PTPRAP18433 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.37□□□□□ -1.87
PTPRAP18433 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PTPRAP18433 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
PTPRAP18433 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PTPRAP18433 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PTPRAP18433 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.36□□□□□ -1.87
PTPRAP18433 Y_RNA.52-201ENST00000362760 96 ntBASIC3.36□□□□□ -1.87
PTPRAP18433 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PTPRAP18433 SNORA26-201ENST00000391286 122 ntBASIC3.36□□□□□ -1.87
PTPRAP18433 RPL32P35-201ENST00000415214 394 ntBASIC3.36□□□□□ -1.87
PTPRAP18433 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPRAP18433 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPRAP18433 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.36□□□□□ -1.87
PTPRAP18433 AC091178.2-201ENST00000584401 117 ntBASIC3.36□□□□□ -1.87
PTPRAP18433 AL121890.5-201ENST00000620848 304 ntBASIC3.36□□□□□ -1.87
PTPRAP18433 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.36□□□□□ -1.87
PTPRAP18433 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.36□□□□□ -1.87
PTPRAP18433 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTPRAP18433 AC091152.2-201ENST00000591628 2569 ntBASIC3.35□□□□□ -1.87
PTPRAP18433 RNA5SP139-201ENST00000364340 117 ntBASIC3.35□□□□□ -1.87
PTPRAP18433 Y_RNA.486-201ENST00000384398 107 ntBASIC3.35□□□□□ -1.87
PTPRAP18433 MIR218-1-201ENST00000384999 110 ntBASIC3.35□□□□□ -1.87
PTPRAP18433 RNU1-101P-201ENST00000391171 127 ntBASIC3.35□□□□□ -1.87
PTPRAP18433 RNU6-1328P-201ENST00000410938 106 ntBASIC3.35□□□□□ -1.87
PTPRAP18433 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.35□□□□□ -1.87
PTPRAP18433 OR9P1P-201ENST00000496431 281 ntBASIC3.35□□□□□ -1.87
PTPRAP18433 SNORA18.4-201ENST00000516440 124 ntBASIC3.35□□□□□ -1.87
PTPRAP18433 SCARNA11.3-201ENST00000517276 130 ntBASIC3.35□□□□□ -1.87
PTPRAP18433 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC3.35□□□□□ -1.87
PTPRAP18433 MIR4679-1-201ENST00000637619 75 ntBASIC3.35□□□□□ -1.87
PTPRAP18433 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
PTPRAP18433 AL021368.2-201ENST00000606125 5352 ntBASIC3.34□□□□□ -1.87
PTPRAP18433 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.34□□□□□ -1.87
PTPRAP18433 RNU6-743P-201ENST00000364151 106 ntBASIC3.34□□□□□ -1.87
PTPRAP18433 RNU6-1138P-201ENST00000365359 106 ntBASIC3.34□□□□□ -1.87
PTPRAP18433 RNA5SP89-201ENST00000410300 108 ntBASIC3.34□□□□□ -1.87
PTPRAP18433 RNA5SP274-201ENST00000410484 108 ntBASIC3.34□□□□□ -1.87
PTPRAP18433 MTCO1P44-201ENST00000441935 243 ntBASIC3.34□□□□□ -1.87
PTPRAP18433 RPS29P21-201ENST00000496272 170 ntBASIC3.34□□□□□ -1.87
PTPRAP18433 AC007751.1-201ENST00000529260 376 ntBASIC3.34□□□□□ -1.87
PTPRAP18433 AC004832.5-201ENST00000608677 401 ntBASIC3.34□□□□□ -1.87
PTPRAP18433 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC3.34□□□□□ -1.87
PTPRAP18433 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
PTPRAP18433 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
PTPRAP18433 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTPRAP18433 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTPRAP18433 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTPRAP18433 RNU1-112P-201ENST00000364401 164 ntBASIC3.33□□□□□ -1.88
PTPRAP18433 MIR624-201ENST00000385217 97 ntBASIC3.33□□□□□ -1.88
PTPRAP18433 MIR591-201ENST00000385290 95 ntBASIC3.33□□□□□ -1.88
PTPRAP18433 RNA5SP127-201ENST00000411051 133 ntBASIC3.33□□□□□ -1.88
PTPRAP18433 RNU2-32P-201ENST00000411193 191 ntBASIC3.33□□□□□ -1.88
PTPRAP18433 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.33□□□□□ -1.88
PTPRAP18433 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.33□□□□□ -1.88
PTPRAP18433 RN7SKP19-201ENST00000516016 252 ntBASIC3.33□□□□□ -1.88
PTPRAP18433 RNU6-168P-201ENST00000516189 101 ntBASIC3.33□□□□□ -1.88
PTPRAP18433 RNU6-1096P-201ENST00000517089 102 ntBASIC3.33□□□□□ -1.88
PTPRAP18433 RNU1-104P-201ENST00000517280 175 ntBASIC3.33□□□□□ -1.88
PTPRAP18433 NDUFA5P6-201ENST00000542110 379 ntBASIC3.33□□□□□ -1.88
PTPRAP18433 MIR4662B-201ENST00000579498 81 ntBASIC3.33□□□□□ -1.88
PTPRAP18433 AL022345.2-201ENST00000606307 135 ntBASIC3.33□□□□□ -1.88
PTPRAP18433 JPX_2.1-201ENST00000614161 69 ntBASIC3.33□□□□□ -1.88
PTPRAP18433 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.33□□□□□ -1.88
PTPRAP18433 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTPRAP18433 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
PTPRAP18433 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
PTPRAP18433 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
PTPRAP18433 AC008555.8-201ENST00000623602 2168 ntBASIC3.32□□□□□ -1.88
PTPRAP18433 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.32□□□□□ -1.88
PTPRAP18433 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTPRAP18433 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTPRAP18433 Y_RNA.66-201ENST00000362862 102 ntBASIC3.32□□□□□ -1.88
PTPRAP18433 RNU6-546P-201ENST00000383991 107 ntBASIC3.32□□□□□ -1.88
PTPRAP18433 MIR196B-201ENST00000384852 84 ntBASIC3.32□□□□□ -1.88
PTPRAP18433 MIR891A-201ENST00000401237 79 ntBASIC3.32□□□□□ -1.88
PTPRAP18433 AL513477.1-202ENST00000417061 214 ntBASIC3.32□□□□□ -1.88
PTPRAP18433 ARF4P2-201ENST00000430209 526 ntBASIC3.32□□□□□ -1.88
PTPRAP18433 RNU7-170P-201ENST00000459303 61 ntBASIC3.32□□□□□ -1.88
PTPRAP18433 Y_RNA.651-201ENST00000459380 103 ntBASIC3.32□□□□□ -1.88
PTPRAP18433 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.32□□□□□ -1.88
PTPRAP18433 AL365205.2-201ENST00000594586 68 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 305.9 ms