Protein–RNA interactions for Protein: O60896

RAMP3, Receptor activity-modifying protein 3, humanhuman

Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAMP3O60896 Y_RNA.557-201ENST00000384680 107 ntBASIC0.84□□□□□ -2.27
RAMP3O60896 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.84□□□□□ -2.27
RAMP3O60896 RNA5SP475-201ENST00000410568 110 ntBASIC0.84□□□□□ -2.27
RAMP3O60896 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.84□□□□□ -2.27
RAMP3O60896 POLR2J4-204ENST00000418424 324 ntBASIC0.84□□□□□ -2.27
RAMP3O60896 AL353997.1-201ENST00000432936 108 ntBASIC0.84□□□□□ -2.27
RAMP3O60896 RPS3AP52-201ENST00000435639 297 ntBASIC0.84□□□□□ -2.27
RAMP3O60896 AC093850.1-201ENST00000454121 251 ntBASIC0.84□□□□□ -2.27
RAMP3O60896 Y_RNA.708-201ENST00000516950 96 ntBASIC0.84□□□□□ -2.27
RAMP3O60896 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.84□□□□□ -2.27
RAMP3O60896 MIR151B-201ENST00000584249 96 ntBASIC0.84□□□□□ -2.27
RAMP3O60896 MIR6788-201ENST00000618842 66 ntBASIC0.84□□□□□ -2.27
RAMP3O60896 AC127459.3-201ENST00000624328 466 ntBASIC0.84□□□□□ -2.27
RAMP3O60896 MIR3674-201ENST00000636576 68 ntBASIC0.84□□□□□ -2.27
RAMP3O60896 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
RAMP3O60896 RNY1-201ENST00000364228 113 ntBASIC0.83□□□□□ -2.28
RAMP3O60896 SNORD114-24-201ENST00000365029 72 ntBASIC0.83□□□□□ -2.28
RAMP3O60896 RNU6-1050P-201ENST00000410388 107 ntBASIC0.83□□□□□ -2.28
RAMP3O60896 RNU5A-5P-201ENST00000411054 116 ntBASIC0.83□□□□□ -2.28
RAMP3O60896 AC104332.1-201ENST00000440471 797 ntBASIC0.83□□□□□ -2.28
RAMP3O60896 AL049830.1-201ENST00000468034 425 ntBASIC0.83□□□□□ -2.28
RAMP3O60896 AC022868.1-201ENST00000517767 391 ntBASIC0.83□□□□□ -2.28
RAMP3O60896 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.83□□□□□ -2.28
RAMP3O60896 AC090517.2-201ENST00000614966 680 ntBASIC0.83□□□□□ -2.28
RAMP3O60896 Y_RNA.473-201ENST00000384333 102 ntBASIC0.82□□□□□ -2.28
RAMP3O60896 RNU6-1215P-201ENST00000384441 102 ntBASIC0.82□□□□□ -2.28
RAMP3O60896 RNU6-601P-201ENST00000384540 107 ntBASIC0.82□□□□□ -2.28
RAMP3O60896 MIR520E-201ENST00000384867 87 ntBASIC0.82□□□□□ -2.28
RAMP3O60896 MIR200A-201ENST00000384875 90 ntBASIC0.82□□□□□ -2.28
RAMP3O60896 MIR548K-201ENST00000408406 116 ntBASIC0.82□□□□□ -2.28
RAMP3O60896 MIR548F5-201ENST00000408421 86 ntBASIC0.82□□□□□ -2.28
RAMP3O60896 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.82□□□□□ -2.28
RAMP3O60896 AC002429.1-201ENST00000437672 148 ntBASIC0.82□□□□□ -2.28
RAMP3O60896 AC107399.1-201ENST00000451226 265 ntBASIC0.82□□□□□ -2.28
RAMP3O60896 AC233266.1-201ENST00000454518 96 ntBASIC0.82□□□□□ -2.28
RAMP3O60896 LINC01399-202ENST00000458450 244 ntBASIC0.82□□□□□ -2.28
RAMP3O60896 AC092989.1-201ENST00000481235 277 ntBASIC0.82□□□□□ -2.28
RAMP3O60896 Y_RNA.670-201ENST00000516255 105 ntBASIC0.82□□□□□ -2.28
RAMP3O60896 RNU6-307P-201ENST00000516743 106 ntBASIC0.82□□□□□ -2.28
RAMP3O60896 RNU6-1096P-201ENST00000517089 102 ntBASIC0.82□□□□□ -2.28
RAMP3O60896 AP002001.1-203ENST00000534002 267 ntBASIC0.82□□□□□ -2.28
RAMP3O60896 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC0.82□□□□□ -2.28
RAMP3O60896 AC005899.2-201ENST00000584353 90 ntBASIC0.82□□□□□ -2.28
RAMP3O60896 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.82□□□□□ -2.28
RAMP3O60896 AL117336.2-201ENST00000602435 335 ntBASIC0.82□□□□□ -2.28
RAMP3O60896 AC005828.6-201ENST00000606610 232 ntBASIC0.82□□□□□ -2.28
RAMP3O60896 AC242852.1-201ENST00000612151 96 ntBASIC0.82□□□□□ -2.28
RAMP3O60896 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.82□□□□□ -2.28
RAMP3O60896 MIR6857-201ENST00000613267 93 ntBASIC0.82□□□□□ -2.28
RAMP3O60896 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.82□□□□□ -2.28
RAMP3O60896 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.82□□□□□ -2.28
RAMP3O60896 AC244015.1-201ENST00000622301 99 ntBASIC0.82□□□□□ -2.28
RAMP3O60896 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
RAMP3O60896 MIRLET7C-201ENST00000362160 84 ntBASIC0.81□□□□□ -2.28
RAMP3O60896 RNU6-874P-201ENST00000362390 105 ntBASIC0.81□□□□□ -2.28
RAMP3O60896 SNORD114-7-201ENST00000362520 77 ntBASIC0.81□□□□□ -2.28
RAMP3O60896 Y_RNA.86-201ENST00000363020 111 ntBASIC0.81□□□□□ -2.28
RAMP3O60896 Y_RNA.112-201ENST00000363250 102 ntBASIC0.81□□□□□ -2.28
RAMP3O60896 RNU6-117P-201ENST00000365415 107 ntBASIC0.81□□□□□ -2.28
RAMP3O60896 RNU6-1310P-201ENST00000384153 107 ntBASIC0.81□□□□□ -2.28
RAMP3O60896 MIR891A-201ENST00000401237 79 ntBASIC0.81□□□□□ -2.28
RAMP3O60896 MIR1277-201ENST00000408536 78 ntBASIC0.81□□□□□ -2.28
RAMP3O60896 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC0.81□□□□□ -2.28
RAMP3O60896 AC092423.1-201ENST00000430165 186 ntBASIC0.81□□□□□ -2.28
RAMP3O60896 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC0.81□□□□□ -2.28
RAMP3O60896 SNORA40.9-201ENST00000515895 93 ntBASIC0.81□□□□□ -2.28
RAMP3O60896 SNORD111.1-201ENST00000516421 86 ntBASIC0.81□□□□□ -2.28
RAMP3O60896 SCARNA16.2-201ENST00000516520 172 ntBASIC0.81□□□□□ -2.28
RAMP3O60896 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.81□□□□□ -2.28
RAMP3O60896 AC068790.6-201ENST00000602558 258 ntBASIC0.81□□□□□ -2.28
RAMP3O60896 MIR6515-201ENST00000619843 57 ntBASIC0.81□□□□□ -2.28
RAMP3O60896 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.81□□□□□ -2.28
RAMP3O60896 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
RAMP3O60896 Y_RNA.124-201ENST00000363339 93 ntBASIC0.8□□□□□ -2.28
RAMP3O60896 RNU6-833P-201ENST00000363486 107 ntBASIC0.8□□□□□ -2.28
RAMP3O60896 SNORD114-27-201ENST00000363766 70 ntBASIC0.8□□□□□ -2.28
RAMP3O60896 RNU4-38P-201ENST00000364472 129 ntBASIC0.8□□□□□ -2.28
RAMP3O60896 Y_RNA.318-201ENST00000365131 97 ntBASIC0.8□□□□□ -2.28
RAMP3O60896 Y_RNA.358-201ENST00000365491 99 ntBASIC0.8□□□□□ -2.28
RAMP3O60896 Y_RNA.363-201ENST00000365529 113 ntBASIC0.8□□□□□ -2.28
RAMP3O60896 MTND3P8-201ENST00000412909 339 ntBASIC0.8□□□□□ -2.28
RAMP3O60896 AL589823.1-201ENST00000429577 183 ntBASIC0.8□□□□□ -2.28
RAMP3O60896 SNORD124-201ENST00000459577 104 ntBASIC0.8□□□□□ -2.28
RAMP3O60896 RPS29P1-201ENST00000465274 159 ntBASIC0.8□□□□□ -2.28
RAMP3O60896 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.8□□□□□ -2.28
RAMP3O60896 CYCTP-201ENST00000504253 315 ntBASIC0.8□□□□□ -2.28
RAMP3O60896 PDCD5P2-201ENST00000507570 312 ntBASIC0.8□□□□□ -2.28
RAMP3O60896 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.8□□□□□ -2.28
RAMP3O60896 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.8□□□□□ -2.28
RAMP3O60896 AL020996.3-201ENST00000606617 222 ntBASIC0.8□□□□□ -2.28
RAMP3O60896 AC009229.3-201ENST00000608056 282 ntBASIC0.8□□□□□ -2.28
RAMP3O60896 AC022709.1-201ENST00000615967 87 ntBASIC0.8□□□□□ -2.28
RAMP3O60896 PISRT1.1-201ENST00000616930 107 ntBASIC0.8□□□□□ -2.28
RAMP3O60896 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
RAMP3O60896 RNU6-454P-201ENST00000364292 107 ntBASIC0.79□□□□□ -2.28
RAMP3O60896 RNU1-36P-201ENST00000365130 165 ntBASIC0.79□□□□□ -2.28
RAMP3O60896 SNORD116-4-201ENST00000384733 96 ntBASIC0.79□□□□□ -2.28
RAMP3O60896 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC0.79□□□□□ -2.28
RAMP3O60896 U8.22-201ENST00000459141 133 ntBASIC0.79□□□□□ -2.28
RAMP3O60896 MIR2355-201ENST00000517199 87 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 282.1 ms