Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.06□□□□□ -2.24
MSH4O15457 AC104260.1-201ENST00000616660 539 ntBASIC1.06□□□□□ -2.24
MSH4O15457 AC099654.14-201ENST00000638599 341 ntBASIC1.06□□□□□ -2.24
MSH4O15457 RNA5SP361-201ENST00000362686 118 ntBASIC1.05□□□□□ -2.24
MSH4O15457 RNU4-76P-201ENST00000364509 141 ntBASIC1.05□□□□□ -2.24
MSH4O15457 Y_RNA.303-201ENST00000364998 94 ntBASIC1.05□□□□□ -2.24
MSH4O15457 RNU6-407P-201ENST00000365280 104 ntBASIC1.05□□□□□ -2.24
MSH4O15457 SNORA70.7-201ENST00000384159 133 ntBASIC1.05□□□□□ -2.24
MSH4O15457 RNU6-1145P-201ENST00000384246 107 ntBASIC1.05□□□□□ -2.24
MSH4O15457 RNU6-505P-201ENST00000384427 107 ntBASIC1.05□□□□□ -2.24
MSH4O15457 Y_RNA.557-201ENST00000384680 107 ntBASIC1.05□□□□□ -2.24
MSH4O15457 MIR532-201ENST00000385025 91 ntBASIC1.05□□□□□ -2.24
MSH4O15457 RNU11-5P-201ENST00000391216 129 ntBASIC1.05□□□□□ -2.24
MSH4O15457 MTCYBP4-201ENST00000401524 249 ntBASIC1.05□□□□□ -2.24
MSH4O15457 Y_RNA.646-201ENST00000410980 101 ntBASIC1.05□□□□□ -2.24
MSH4O15457 AC098614.3-201ENST00000438957 440 ntBASIC1.05□□□□□ -2.24
MSH4O15457 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.05□□□□□ -2.24
MSH4O15457 AC116353.2-201ENST00000505332 712 ntBASIC1.05□□□□□ -2.24
MSH4O15457 RNU7-40P-201ENST00000516397 64 ntBASIC1.05□□□□□ -2.24
MSH4O15457 Y_RNA.691-201ENST00000516611 103 ntBASIC1.05□□□□□ -2.24
MSH4O15457 RPL21P9-201ENST00000556149 474 ntBASIC1.05□□□□□ -2.24
MSH4O15457 MIR4778-201ENST00000577635 80 ntBASIC1.05□□□□□ -2.24
MSH4O15457 MIR3973-201ENST00000579824 107 ntBASIC1.05□□□□□ -2.24
MSH4O15457 AC092794.2-201ENST00000620933 563 ntBASIC1.05□□□□□ -2.24
MSH4O15457 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.04□□□□□ -2.24
MSH4O15457 Y_RNA.166-201ENST00000363730 102 ntBASIC1.04□□□□□ -2.24
MSH4O15457 RNY3P11-201ENST00000364153 102 ntBASIC1.04□□□□□ -2.24
MSH4O15457 Y_RNA.265-201ENST00000364677 108 ntBASIC1.04□□□□□ -2.24
MSH4O15457 RNU6-310P-201ENST00000384655 107 ntBASIC1.04□□□□□ -2.24
MSH4O15457 AC018865.2-201ENST00000423631 129 ntBASIC1.04□□□□□ -2.24
MSH4O15457 UBE2V1P7-201ENST00000446395 340 ntBASIC1.04□□□□□ -2.24
MSH4O15457 RPL30P15-201ENST00000457129 321 ntBASIC1.04□□□□□ -2.24
MSH4O15457 Y_RNA.635-201ENST00000459041 101 ntBASIC1.04□□□□□ -2.24
MSH4O15457 RNU6-922P-201ENST00000516753 99 ntBASIC1.04□□□□□ -2.24
MSH4O15457 RNU6-165P-201ENST00000517170 99 ntBASIC1.04□□□□□ -2.24
MSH4O15457 AC022868.1-201ENST00000517767 391 ntBASIC1.04□□□□□ -2.24
MSH4O15457 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.04□□□□□ -2.24
MSH4O15457 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.04□□□□□ -2.24
MSH4O15457 MIR3684-201ENST00000579779 74 ntBASIC1.04□□□□□ -2.24
MSH4O15457 AL078603.1-201ENST00000603824 313 ntBASIC1.04□□□□□ -2.24
MSH4O15457 MTND4LP32-201ENST00000636111 270 ntBASIC1.04□□□□□ -2.24
MSH4O15457 SNORA72.1-201ENST00000363485 129 ntBASIC1.03□□□□□ -2.24
MSH4O15457 Y_RNA.474-201ENST00000384341 102 ntBASIC1.03□□□□□ -2.24
MSH4O15457 Y_RNA.498-201ENST00000384460 102 ntBASIC1.03□□□□□ -2.24
MSH4O15457 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.03□□□□□ -2.24
MSH4O15457 DYNLT3P2-201ENST00000442517 295 ntBASIC1.03□□□□□ -2.24
MSH4O15457 MTCO3P10-201ENST00000455912 772 ntBASIC1.03□□□□□ -2.24
MSH4O15457 AC091021.1-201ENST00000468051 388 ntBASIC1.03□□□□□ -2.24
MSH4O15457 OR2A41P-201ENST00000473586 105 ntBASIC1.03□□□□□ -2.24
MSH4O15457 AC074133.1-201ENST00000515696 183 ntBASIC1.03□□□□□ -2.24
MSH4O15457 RNA5SP20-201ENST00000515976 84 ntBASIC1.03□□□□□ -2.24
MSH4O15457 RNU6-507P-201ENST00000516045 100 ntBASIC1.03□□□□□ -2.24
MSH4O15457 RNU6-559P-201ENST00000516151 98 ntBASIC1.03□□□□□ -2.24
MSH4O15457 RNU2-56P-201ENST00000516826 190 ntBASIC1.03□□□□□ -2.24
MSH4O15457 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.03□□□□□ -2.24
MSH4O15457 AC011604.1-201ENST00000545978 196 ntBASIC1.03□□□□□ -2.24
MSH4O15457 AC018448.1-201ENST00000552843 316 ntBASIC1.03□□□□□ -2.24
MSH4O15457 AL513534.2-201ENST00000603836 250 ntBASIC1.03□□□□□ -2.24
MSH4O15457 AC103810.9-201ENST00000606688 112 ntBASIC1.03□□□□□ -2.24
MSH4O15457 RMST_2.1-201ENST00000617263 136 ntBASIC1.03□□□□□ -2.24
MSH4O15457 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
MSH4O15457 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.03□□□□□ -2.25
MSH4O15457 SNORA27.1-201ENST00000362604 124 ntBASIC1.02□□□□□ -2.25
MSH4O15457 Y_RNA.142-201ENST00000363491 102 ntBASIC1.02□□□□□ -2.25
MSH4O15457 RNU6-1188P-201ENST00000363795 107 ntBASIC1.02□□□□□ -2.25
MSH4O15457 Y_RNA.267-201ENST00000364679 109 ntBASIC1.02□□□□□ -2.25
MSH4O15457 RNU6-376P-201ENST00000384731 106 ntBASIC1.02□□□□□ -2.25
MSH4O15457 MIR489-201ENST00000384923 84 ntBASIC1.02□□□□□ -2.25
MSH4O15457 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC1.02□□□□□ -2.25
MSH4O15457 PCNPP5-201ENST00000452246 481 ntBASIC1.02□□□□□ -2.25
MSH4O15457 MIR2053-201ENST00000459295 91 ntBASIC1.02□□□□□ -2.25
MSH4O15457 RNU7-169P-201ENST00000459456 61 ntBASIC1.02□□□□□ -2.25
MSH4O15457 RPL17P19-201ENST00000489069 552 ntBASIC1.02□□□□□ -2.25
MSH4O15457 AC091951.2-201ENST00000500762 203 ntBASIC1.02□□□□□ -2.25
MSH4O15457 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.02□□□□□ -2.25
MSH4O15457 AC105758.1-201ENST00000506038 399 ntBASIC1.02□□□□□ -2.25
MSH4O15457 AC022493.2-201ENST00000506122 481 ntBASIC1.02□□□□□ -2.25
MSH4O15457 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.02□□□□□ -2.25
MSH4O15457 RNA5SP168-201ENST00000516642 112 ntBASIC1.02□□□□□ -2.25
MSH4O15457 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC1.02□□□□□ -2.25
MSH4O15457 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.02□□□□□ -2.25
MSH4O15457 RNU6-199P-201ENST00000362954 107 ntBASIC1.01□□□□□ -2.25
MSH4O15457 SNORA22-201ENST00000383907 134 ntBASIC1.01□□□□□ -2.25
MSH4O15457 RNU6-890P-201ENST00000384121 107 ntBASIC1.01□□□□□ -2.25
MSH4O15457 SNORA25-201ENST00000384384 134 ntBASIC1.01□□□□□ -2.25
MSH4O15457 SNORA22C-201ENST00000384614 134 ntBASIC1.01□□□□□ -2.25
MSH4O15457 MIR562-201ENST00000384894 95 ntBASIC1.01□□□□□ -2.25
MSH4O15457 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.01□□□□□ -2.25
MSH4O15457 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.01□□□□□ -2.25
MSH4O15457 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.01□□□□□ -2.25
MSH4O15457 CALM2P4-201ENST00000430810 426 ntBASIC1.01□□□□□ -2.25
MSH4O15457 RNU6-625P-201ENST00000459412 107 ntBASIC1.01□□□□□ -2.25
MSH4O15457 snoU13.18-201ENST00000459483 104 ntBASIC1.01□□□□□ -2.25
MSH4O15457 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.01□□□□□ -2.25
MSH4O15457 RN7SKP49-201ENST00000516675 260 ntBASIC1.01□□□□□ -2.25
MSH4O15457 RNU6-341P-201ENST00000516973 96 ntBASIC1.01□□□□□ -2.25
MSH4O15457 MIR5690-201ENST00000583739 73 ntBASIC1.01□□□□□ -2.25
MSH4O15457 AC005899.2-201ENST00000584353 90 ntBASIC1.01□□□□□ -2.25
MSH4O15457 AC113139.1-201ENST00000605049 239 ntBASIC1.01□□□□□ -2.25
MSH4O15457 BX284668.6-201ENST00000606899 438 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 200.1 ms