Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 RNU4-41P-201ENST00000364426 143 ntBASIC0.67□□□□□ -2.3
LRRC40Q9H9A6 Y_RNA.330-201ENST00000365230 109 ntBASIC0.67□□□□□ -2.3
LRRC40Q9H9A6 MIR520G-201ENST00000385064 90 ntBASIC0.67□□□□□ -2.3
LRRC40Q9H9A6 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.67□□□□□ -2.3
LRRC40Q9H9A6 AL035398.1-201ENST00000430869 322 ntBASIC0.67□□□□□ -2.3
LRRC40Q9H9A6 AL137792.2-201ENST00000443484 235 ntBASIC0.67□□□□□ -2.3
LRRC40Q9H9A6 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.67□□□□□ -2.3
LRRC40Q9H9A6 snoU13.25-201ENST00000458945 104 ntBASIC0.67□□□□□ -2.3
LRRC40Q9H9A6 Y_RNA.638-201ENST00000459374 113 ntBASIC0.67□□□□□ -2.3
LRRC40Q9H9A6 AC022868.1-201ENST00000517767 391 ntBASIC0.67□□□□□ -2.3
LRRC40Q9H9A6 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.67□□□□□ -2.3
LRRC40Q9H9A6 MIR3192-201ENST00000584920 77 ntBASIC0.67□□□□□ -2.3
LRRC40Q9H9A6 AC100812.1-201ENST00000607622 580 ntBASIC0.67□□□□□ -2.3
LRRC40Q9H9A6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
LRRC40Q9H9A6 Y_RNA.38-201ENST00000362617 102 ntBASIC0.66□□□□□ -2.3
LRRC40Q9H9A6 Y_RNA.106-201ENST00000363189 100 ntBASIC0.66□□□□□ -2.3
LRRC40Q9H9A6 RNY3P3-201ENST00000363816 102 ntBASIC0.66□□□□□ -2.3
LRRC40Q9H9A6 RNU6-110P-201ENST00000384508 104 ntBASIC0.66□□□□□ -2.3
LRRC40Q9H9A6 RNU6-136P-201ENST00000384663 107 ntBASIC0.66□□□□□ -2.3
LRRC40Q9H9A6 RNU5A-5P-201ENST00000411054 116 ntBASIC0.66□□□□□ -2.3
LRRC40Q9H9A6 RNU6-1001P-201ENST00000411265 100 ntBASIC0.66□□□□□ -2.3
LRRC40Q9H9A6 ELOCP21-201ENST00000412558 336 ntBASIC0.66□□□□□ -2.3
LRRC40Q9H9A6 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.66□□□□□ -2.3
LRRC40Q9H9A6 AL358944.1-201ENST00000528537 144 ntBASIC0.66□□□□□ -2.3
LRRC40Q9H9A6 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC0.66□□□□□ -2.3
LRRC40Q9H9A6 AC136443.5-201ENST00000603741 370 ntBASIC0.66□□□□□ -2.3
LRRC40Q9H9A6 AL590095.2-201ENST00000604136 117 ntBASIC0.66□□□□□ -2.3
LRRC40Q9H9A6 AC127459.3-201ENST00000624328 466 ntBASIC0.66□□□□□ -2.3
LRRC40Q9H9A6 MTND5P16-201ENST00000460269 1703 ntBASIC0.65□□□□□ -2.31
LRRC40Q9H9A6 RNU6-163P-201ENST00000384396 106 ntBASIC0.65□□□□□ -2.31
LRRC40Q9H9A6 MIR1276-201ENST00000408707 83 ntBASIC0.65□□□□□ -2.31
LRRC40Q9H9A6 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC0.65□□□□□ -2.31
LRRC40Q9H9A6 COX6CP6-201ENST00000490840 228 ntBASIC0.65□□□□□ -2.31
LRRC40Q9H9A6 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.65□□□□□ -2.31
LRRC40Q9H9A6 RNU6-1096P-201ENST00000517089 102 ntBASIC0.65□□□□□ -2.31
LRRC40Q9H9A6 AC011604.1-201ENST00000545978 196 ntBASIC0.65□□□□□ -2.31
LRRC40Q9H9A6 AC245008.1-201ENST00000608123 476 ntBASIC0.65□□□□□ -2.31
LRRC40Q9H9A6 RNA5SP264-201ENST00000363115 107 ntBASIC0.64□□□□□ -2.31
LRRC40Q9H9A6 Y_RNA.336-201ENST00000365307 109 ntBASIC0.64□□□□□ -2.31
LRRC40Q9H9A6 MIR508-201ENST00000384857 115 ntBASIC0.64□□□□□ -2.31
LRRC40Q9H9A6 MIR329-1-201ENST00000385028 80 ntBASIC0.64□□□□□ -2.31
LRRC40Q9H9A6 CYCTP-201ENST00000504253 315 ntBASIC0.64□□□□□ -2.31
LRRC40Q9H9A6 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.64□□□□□ -2.31
LRRC40Q9H9A6 RNU6-273P-201ENST00000516937 96 ntBASIC0.64□□□□□ -2.31
LRRC40Q9H9A6 DEFB108E-201ENST00000524692 240 ntBASIC0.64□□□□□ -2.31
LRRC40Q9H9A6 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC0.64□□□□□ -2.31
LRRC40Q9H9A6 CYP3A137P-201ENST00000562436 69 ntBASIC0.64□□□□□ -2.31
LRRC40Q9H9A6 MIR3942-201ENST00000585264 109 ntBASIC0.64□□□□□ -2.31
LRRC40Q9H9A6 AC120024.3-201ENST00000603167 156 ntBASIC0.64□□□□□ -2.31
LRRC40Q9H9A6 MIR1321-201ENST00000637766 79 ntBASIC0.64□□□□□ -2.31
LRRC40Q9H9A6 Y_RNA.48-201ENST00000362710 103 ntBASIC0.63□□□□□ -2.31
LRRC40Q9H9A6 Y_RNA.498-201ENST00000384460 102 ntBASIC0.63□□□□□ -2.31
LRRC40Q9H9A6 PIGPP3-201ENST00000425307 415 ntBASIC0.63□□□□□ -2.31
LRRC40Q9H9A6 AC093019.1-201ENST00000443135 252 ntBASIC0.63□□□□□ -2.31
LRRC40Q9H9A6 PCNPP5-201ENST00000452246 481 ntBASIC0.63□□□□□ -2.31
LRRC40Q9H9A6 AC113410.1-201ENST00000505029 247 ntBASIC0.63□□□□□ -2.31
LRRC40Q9H9A6 AC023827.1-201ENST00000569247 97 ntBASIC0.63□□□□□ -2.31
LRRC40Q9H9A6 AC125232.2-201ENST00000592457 143 ntBASIC0.63□□□□□ -2.31
LRRC40Q9H9A6 AL008636.1-201ENST00000625038 1018 ntBASIC0.63□□□□□ -2.31
LRRC40Q9H9A6 AC027279.3-201ENST00000625055 122 ntBASIC0.63□□□□□ -2.31
LRRC40Q9H9A6 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.63□□□□□ -2.31
LRRC40Q9H9A6 U6.115-201ENST00000636045 103 ntBASIC0.63□□□□□ -2.31
LRRC40Q9H9A6 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.62□□□□□ -2.31
LRRC40Q9H9A6 MIR103A2-201ENST00000362154 78 ntBASIC0.62□□□□□ -2.31
LRRC40Q9H9A6 RNU6-1059P-201ENST00000363752 98 ntBASIC0.62□□□□□ -2.31
LRRC40Q9H9A6 RNU6-1335P-201ENST00000365426 107 ntBASIC0.62□□□□□ -2.31
LRRC40Q9H9A6 MIR520E-201ENST00000384867 87 ntBASIC0.62□□□□□ -2.31
LRRC40Q9H9A6 MIR873-201ENST00000401120 77 ntBASIC0.62□□□□□ -2.31
LRRC40Q9H9A6 EIF1P2-201ENST00000428233 350 ntBASIC0.62□□□□□ -2.31
LRRC40Q9H9A6 AL162725.1-201ENST00000435405 301 ntBASIC0.62□□□□□ -2.31
LRRC40Q9H9A6 MTND1P1-201ENST00000445453 368 ntBASIC0.62□□□□□ -2.31
LRRC40Q9H9A6 AC074133.1-201ENST00000515696 183 ntBASIC0.62□□□□□ -2.31
LRRC40Q9H9A6 AC004812.1-201ENST00000540773 146 ntBASIC0.62□□□□□ -2.31
LRRC40Q9H9A6 AC004817.2-201ENST00000561794 651 ntBASIC0.62□□□□□ -2.31
LRRC40Q9H9A6 AC133485.1-201ENST00000567176 124 ntBASIC0.62□□□□□ -2.31
LRRC40Q9H9A6 AC138907.6-201ENST00000568401 126 ntBASIC0.62□□□□□ -2.31
LRRC40Q9H9A6 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC0.62□□□□□ -2.31
LRRC40Q9H9A6 AC131055.1-201ENST00000584626 316 ntBASIC0.62□□□□□ -2.31
LRRC40Q9H9A6 AL357075.2-201ENST00000614906 189 ntBASIC0.62□□□□□ -2.31
LRRC40Q9H9A6 AC007014.2-201ENST00000615581 479 ntBASIC0.62□□□□□ -2.31
LRRC40Q9H9A6 AC104260.1-201ENST00000616660 539 ntBASIC0.62□□□□□ -2.31
LRRC40Q9H9A6 5S_rRNA.13-201ENST00000622298 123 ntBASIC0.62□□□□□ -2.31
LRRC40Q9H9A6 SNORD68-201ENST00000363214 84 ntBASIC0.61□□□□□ -2.31
LRRC40Q9H9A6 RNU6-117P-201ENST00000365415 107 ntBASIC0.61□□□□□ -2.31
LRRC40Q9H9A6 SNORD114-22-201ENST00000365423 72 ntBASIC0.61□□□□□ -2.31
LRRC40Q9H9A6 RNU6-1145P-201ENST00000384246 107 ntBASIC0.61□□□□□ -2.31
LRRC40Q9H9A6 RNU6-733P-201ENST00000410759 104 ntBASIC0.61□□□□□ -2.31
LRRC40Q9H9A6 USP9YP30-201ENST00000430729 455 ntBASIC0.61□□□□□ -2.31
LRRC40Q9H9A6 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.61□□□□□ -2.31
LRRC40Q9H9A6 RPS20P10-201ENST00000451209 253 ntBASIC0.61□□□□□ -2.31
LRRC40Q9H9A6 U7.7-201ENST00000459276 60 ntBASIC0.61□□□□□ -2.31
LRRC40Q9H9A6 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC0.61□□□□□ -2.31
LRRC40Q9H9A6 RNU1-54P-201ENST00000517181 120 ntBASIC0.61□□□□□ -2.31
LRRC40Q9H9A6 AC025627.3-201ENST00000582078 182 ntBASIC0.61□□□□□ -2.31
LRRC40Q9H9A6 AC093913.1-201ENST00000614178 329 ntBASIC0.61□□□□□ -2.31
LRRC40Q9H9A6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.61□□□□□ -2.31
LRRC40Q9H9A6 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.6□□□□□ -2.31
LRRC40Q9H9A6 MIR452-201ENST00000385020 85 ntBASIC0.6□□□□□ -2.31
LRRC40Q9H9A6 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
LRRC40Q9H9A6 SNORD89-201ENST00000390981 114 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 183.9 ms