Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 RNU6-897P-201ENST00000517135 105 ntBASIC1.59□□□□□ -2.15
PHF1O43189 AL117187.1-201ENST00000555482 181 ntBASIC1.59□□□□□ -2.15
PHF1O43189 AC136932.1-201ENST00000574771 208 ntBASIC1.59□□□□□ -2.15
PHF1O43189 MIR3169-201ENST00000578032 83 ntBASIC1.59□□□□□ -2.15
PHF1O43189 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.59□□□□□ -2.15
PHF1O43189 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.59□□□□□ -2.15
PHF1O43189 AC136443.5-201ENST00000603741 370 ntBASIC1.59□□□□□ -2.15
PHF1O43189 Y_RNA.772-201ENST00000606692 102 ntBASIC1.59□□□□□ -2.15
PHF1O43189 AL353149.1-201ENST00000610667 244 ntBASIC1.59□□□□□ -2.15
PHF1O43189 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.59□□□□□ -2.15
PHF1O43189 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
PHF1O43189 Y_RNA.214-201ENST00000364201 112 ntBASIC1.58□□□□□ -2.16
PHF1O43189 RNU6-926P-201ENST00000384075 107 ntBASIC1.58□□□□□ -2.16
PHF1O43189 Y_RNA.439-201ENST00000384119 94 ntBASIC1.58□□□□□ -2.16
PHF1O43189 MIR518A2-201ENST00000384966 87 ntBASIC1.58□□□□□ -2.16
PHF1O43189 AC139712.2-201ENST00000424302 339 ntBASIC1.58□□□□□ -2.16
PHF1O43189 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.58□□□□□ -2.16
PHF1O43189 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.58□□□□□ -2.16
PHF1O43189 AL118496.2-201ENST00000448300 230 ntBASIC1.58□□□□□ -2.16
PHF1O43189 AC245102.2-201ENST00000448956 180 ntBASIC1.58□□□□□ -2.16
PHF1O43189 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.58□□□□□ -2.16
PHF1O43189 RNU6-1045P-201ENST00000516321 107 ntBASIC1.58□□□□□ -2.16
PHF1O43189 RNU2-12P-201ENST00000517216 168 ntBASIC1.58□□□□□ -2.16
PHF1O43189 AC025647.1-201ENST00000517879 253 ntBASIC1.58□□□□□ -2.16
PHF1O43189 AC131281.1-201ENST00000522984 164 ntBASIC1.58□□□□□ -2.16
PHF1O43189 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.58□□□□□ -2.16
PHF1O43189 MIR3683-201ENST00000580847 82 ntBASIC1.58□□□□□ -2.16
PHF1O43189 SNORA4-201ENST00000584302 138 ntBASIC1.58□□□□□ -2.16
PHF1O43189 PRR13P7-201ENST00000605538 430 ntBASIC1.58□□□□□ -2.16
PHF1O43189 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.58□□□□□ -2.16
PHF1O43189 AC022513.1-201ENST00000624512 117 ntBASIC1.58□□□□□ -2.16
PHF1O43189 MIR3674-201ENST00000636576 68 ntBASIC1.58□□□□□ -2.16
PHF1O43189 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.58□□□□□ -2.16
PHF1O43189 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
PHF1O43189 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.58□□□□□ -2.16
PHF1O43189 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
PHF1O43189 Y_RNA.105-201ENST00000363182 111 ntBASIC1.57□□□□□ -2.16
PHF1O43189 Y_RNA.133-201ENST00000363428 110 ntBASIC1.57□□□□□ -2.16
PHF1O43189 RNU6-418P-201ENST00000384035 107 ntBASIC1.57□□□□□ -2.16
PHF1O43189 RNU6-20P-201ENST00000384106 107 ntBASIC1.57□□□□□ -2.16
PHF1O43189 RNU6-1310P-201ENST00000384153 107 ntBASIC1.57□□□□□ -2.16
PHF1O43189 RNU6-160P-201ENST00000384591 107 ntBASIC1.57□□□□□ -2.16
PHF1O43189 SNORD115-46-201ENST00000390982 71 ntBASIC1.57□□□□□ -2.16
PHF1O43189 AL627390.1-201ENST00000396055 340 ntBASIC1.57□□□□□ -2.16
PHF1O43189 RNU6-121P-201ENST00000410525 99 ntBASIC1.57□□□□□ -2.16
PHF1O43189 RNU6-1199P-201ENST00000411249 104 ntBASIC1.57□□□□□ -2.16
PHF1O43189 AC244636.1-201ENST00000421152 228 ntBASIC1.57□□□□□ -2.16
PHF1O43189 ELOCP20-201ENST00000422460 345 ntBASIC1.57□□□□□ -2.16
PHF1O43189 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.57□□□□□ -2.16
PHF1O43189 AC016717.1-201ENST00000448918 286 ntBASIC1.57□□□□□ -2.16
PHF1O43189 MRPS35P2-201ENST00000508242 191 ntBASIC1.57□□□□□ -2.16
PHF1O43189 RNU6-1046P-201ENST00000516538 107 ntBASIC1.57□□□□□ -2.16
PHF1O43189 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.57□□□□□ -2.16
PHF1O43189 AC022441.3-201ENST00000605737 136 ntBASIC1.57□□□□□ -2.16
PHF1O43189 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.57□□□□□ -2.16
PHF1O43189 AC127459.3-201ENST00000624328 466 ntBASIC1.57□□□□□ -2.16
PHF1O43189 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.56□□□□□ -2.16
PHF1O43189 RNU1-58P-201ENST00000362413 163 ntBASIC1.56□□□□□ -2.16
PHF1O43189 SNORD114-7-201ENST00000362520 77 ntBASIC1.56□□□□□ -2.16
PHF1O43189 Y_RNA.101-201ENST00000363154 102 ntBASIC1.56□□□□□ -2.16
PHF1O43189 RNU6-626P-201ENST00000363354 107 ntBASIC1.56□□□□□ -2.16
PHF1O43189 Y_RNA.210-201ENST00000364161 110 ntBASIC1.56□□□□□ -2.16
PHF1O43189 Y_RNA.243-201ENST00000364481 109 ntBASIC1.56□□□□□ -2.16
PHF1O43189 Y_RNA.498-201ENST00000384460 102 ntBASIC1.56□□□□□ -2.16
PHF1O43189 RNU6-1105P-201ENST00000384774 107 ntBASIC1.56□□□□□ -2.16
PHF1O43189 RNU6-1109P-201ENST00000391187 107 ntBASIC1.56□□□□□ -2.16
PHF1O43189 AL117342.1-201ENST00000404861 406 ntBASIC1.56□□□□□ -2.16
PHF1O43189 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.56□□□□□ -2.16
PHF1O43189 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.56□□□□□ -2.16
PHF1O43189 RNU6-966P-201ENST00000516479 104 ntBASIC1.56□□□□□ -2.16
PHF1O43189 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC1.56□□□□□ -2.16
PHF1O43189 SUMO2P18-201ENST00000518873 252 ntBASIC1.56□□□□□ -2.16
PHF1O43189 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.56□□□□□ -2.16
PHF1O43189 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.56□□□□□ -2.16
PHF1O43189 DNAJC19P9-201ENST00000555084 351 ntBASIC1.56□□□□□ -2.16
PHF1O43189 AC024614.2-201ENST00000577584 372 ntBASIC1.56□□□□□ -2.16
PHF1O43189 MIR3684-201ENST00000579779 74 ntBASIC1.56□□□□□ -2.16
PHF1O43189 MIR4300-201ENST00000581016 96 ntBASIC1.56□□□□□ -2.16
PHF1O43189 AC008737.2-201ENST00000599446 118 ntBASIC1.56□□□□□ -2.16
PHF1O43189 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.56□□□□□ -2.16
PHF1O43189 AL590240.4-201ENST00000616908 390 ntBASIC1.56□□□□□ -2.16
PHF1O43189 AC084768.2-201ENST00000622736 221 ntBASIC1.56□□□□□ -2.16
PHF1O43189 AL159152.1-201ENST00000635019 2587 ntBASIC1.55□□□□□ -2.16
PHF1O43189 RNA5SP493-201ENST00000364115 91 ntBASIC1.55□□□□□ -2.16
PHF1O43189 SNORA16.1-201ENST00000364597 132 ntBASIC1.55□□□□□ -2.16
PHF1O43189 Y_RNA.518-201ENST00000384552 113 ntBASIC1.55□□□□□ -2.16
PHF1O43189 SNORA8-201ENST00000384574 139 ntBASIC1.55□□□□□ -2.16
PHF1O43189 RNU2-54P-201ENST00000410299 190 ntBASIC1.55□□□□□ -2.16
PHF1O43189 RNU5A-5P-201ENST00000411054 116 ntBASIC1.55□□□□□ -2.16
PHF1O43189 RNU6-57P-201ENST00000411348 103 ntBASIC1.55□□□□□ -2.16
PHF1O43189 AL390729.2-201ENST00000416137 156 ntBASIC1.55□□□□□ -2.16
PHF1O43189 AC060773.1-201ENST00000421698 310 ntBASIC1.55□□□□□ -2.16
PHF1O43189 RPL31P63-201ENST00000422565 375 ntBASIC1.55□□□□□ -2.16
PHF1O43189 AL731563.1-201ENST00000442202 214 ntBASIC1.55□□□□□ -2.16
PHF1O43189 SUMO1P2-201ENST00000452524 304 ntBASIC1.55□□□□□ -2.16
PHF1O43189 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.55□□□□□ -2.16
PHF1O43189 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.55□□□□□ -2.16
PHF1O43189 MIR3122-201ENST00000577243 73 ntBASIC1.55□□□□□ -2.16
PHF1O43189 AC005176.2-201ENST00000596933 147 ntBASIC1.55□□□□□ -2.16
PHF1O43189 AC004467.1-201ENST00000615678 330 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 204.2 ms