Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 AC108706.1-201ENST00000611053 297 ntBASIC0.61□□□□□ -2.31
TRBV9A0A0B4J1U6 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
TRBV9A0A0B4J1U6 HSBP1P2-201ENST00000299671 229 ntBASIC0.6□□□□□ -2.31
TRBV9A0A0B4J1U6 Y_RNA.106-201ENST00000363189 100 ntBASIC0.6□□□□□ -2.31
TRBV9A0A0B4J1U6 Y_RNA.330-201ENST00000365230 109 ntBASIC0.6□□□□□ -2.31
TRBV9A0A0B4J1U6 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.6□□□□□ -2.31
TRBV9A0A0B4J1U6 AL137792.2-201ENST00000443484 235 ntBASIC0.6□□□□□ -2.31
TRBV9A0A0B4J1U6 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.6□□□□□ -2.31
TRBV9A0A0B4J1U6 MTND1P1-201ENST00000445453 368 ntBASIC0.6□□□□□ -2.31
TRBV9A0A0B4J1U6 CYCTP-201ENST00000504253 315 ntBASIC0.6□□□□□ -2.31
TRBV9A0A0B4J1U6 AC022868.1-201ENST00000517767 391 ntBASIC0.6□□□□□ -2.31
TRBV9A0A0B4J1U6 AL358944.1-201ENST00000528537 144 ntBASIC0.6□□□□□ -2.31
TRBV9A0A0B4J1U6 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.6□□□□□ -2.31
TRBV9A0A0B4J1U6 AC136443.5-201ENST00000603741 370 ntBASIC0.6□□□□□ -2.31
TRBV9A0A0B4J1U6 AL353765.1-201ENST00000605514 183 ntBASIC0.6□□□□□ -2.31
TRBV9A0A0B4J1U6 AC127459.3-201ENST00000624328 466 ntBASIC0.6□□□□□ -2.31
TRBV9A0A0B4J1U6 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC0.6□□□□□ -2.31
TRBV9A0A0B4J1U6 MTND5P16-201ENST00000460269 1703 ntBASIC0.6□□□□□ -2.31
TRBV9A0A0B4J1U6 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.6□□□□□ -2.31
TRBV9A0A0B4J1U6 Y_RNA.38-201ENST00000362617 102 ntBASIC0.59□□□□□ -2.31
TRBV9A0A0B4J1U6 RNU6-833P-201ENST00000363486 107 ntBASIC0.59□□□□□ -2.31
TRBV9A0A0B4J1U6 MIR526A1-201ENST00000384897 85 ntBASIC0.59□□□□□ -2.31
TRBV9A0A0B4J1U6 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.59□□□□□ -2.31
TRBV9A0A0B4J1U6 RNU2-16P-201ENST00000410712 136 ntBASIC0.59□□□□□ -2.31
TRBV9A0A0B4J1U6 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.59□□□□□ -2.31
TRBV9A0A0B4J1U6 MTND5P15-201ENST00000434246 349 ntBASIC0.59□□□□□ -2.31
TRBV9A0A0B4J1U6 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC0.59□□□□□ -2.31
TRBV9A0A0B4J1U6 RNU6-1096P-201ENST00000517089 102 ntBASIC0.59□□□□□ -2.31
TRBV9A0A0B4J1U6 RNU6-1116P-201ENST00000517269 99 ntBASIC0.59□□□□□ -2.31
TRBV9A0A0B4J1U6 AC026407.1-201ENST00000518369 204 ntBASIC0.59□□□□□ -2.31
TRBV9A0A0B4J1U6 AC120024.3-201ENST00000603167 156 ntBASIC0.59□□□□□ -2.31
TRBV9A0A0B4J1U6 MIR8070-201ENST00000616510 88 ntBASIC0.59□□□□□ -2.31
TRBV9A0A0B4J1U6 MIR1321-201ENST00000637766 79 ntBASIC0.59□□□□□ -2.31
TRBV9A0A0B4J1U6 MIR6866-201ENST00000638146 69 ntBASIC0.59□□□□□ -2.31
TRBV9A0A0B4J1U6 Y_RNA.4-201ENST00000362333 112 ntBASIC0.58□□□□□ -2.32
TRBV9A0A0B4J1U6 RNU4-41P-201ENST00000364426 143 ntBASIC0.58□□□□□ -2.32
TRBV9A0A0B4J1U6 Y_RNA.336-201ENST00000365307 109 ntBASIC0.58□□□□□ -2.32
TRBV9A0A0B4J1U6 RNU6-110P-201ENST00000384508 104 ntBASIC0.58□□□□□ -2.32
TRBV9A0A0B4J1U6 MIR452-201ENST00000385020 85 ntBASIC0.58□□□□□ -2.32
TRBV9A0A0B4J1U6 MIR873-201ENST00000401120 77 ntBASIC0.58□□□□□ -2.32
TRBV9A0A0B4J1U6 RNU6-373P-201ENST00000411247 98 ntBASIC0.58□□□□□ -2.32
TRBV9A0A0B4J1U6 AC009161.1-201ENST00000417306 376 ntBASIC0.58□□□□□ -2.32
TRBV9A0A0B4J1U6 AC093019.1-201ENST00000443135 252 ntBASIC0.58□□□□□ -2.32
TRBV9A0A0B4J1U6 PCNPP5-201ENST00000452246 481 ntBASIC0.58□□□□□ -2.32
TRBV9A0A0B4J1U6 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC0.58□□□□□ -2.32
TRBV9A0A0B4J1U6 AC004817.2-201ENST00000561794 651 ntBASIC0.58□□□□□ -2.32
TRBV9A0A0B4J1U6 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.58□□□□□ -2.32
TRBV9A0A0B4J1U6 MIR3942-201ENST00000585264 109 ntBASIC0.58□□□□□ -2.32
TRBV9A0A0B4J1U6 AC125232.2-201ENST00000592457 143 ntBASIC0.58□□□□□ -2.32
TRBV9A0A0B4J1U6 MIR6504-201ENST00000613520 61 ntBASIC0.58□□□□□ -2.32
TRBV9A0A0B4J1U6 AC106800.4-201ENST00000614905 153 ntBASIC0.58□□□□□ -2.32
TRBV9A0A0B4J1U6 AC104260.1-201ENST00000616660 539 ntBASIC0.58□□□□□ -2.32
TRBV9A0A0B4J1U6 AC023934.1-201ENST00000574529 2389 ntBASIC0.58□□□□□ -2.32
TRBV9A0A0B4J1U6 MIR103A2-201ENST00000362154 78 ntBASIC0.57□□□□□ -2.32
TRBV9A0A0B4J1U6 RNU5A-5P-201ENST00000411054 116 ntBASIC0.57□□□□□ -2.32
TRBV9A0A0B4J1U6 PIGPP3-201ENST00000425307 415 ntBASIC0.57□□□□□ -2.32
TRBV9A0A0B4J1U6 SUMO1P2-201ENST00000452524 304 ntBASIC0.57□□□□□ -2.32
TRBV9A0A0B4J1U6 RNU7-87P-201ENST00000459343 62 ntBASIC0.57□□□□□ -2.32
TRBV9A0A0B4J1U6 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.57□□□□□ -2.32
TRBV9A0A0B4J1U6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
TRBV9A0A0B4J1U6 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.57□□□□□ -2.32
TRBV9A0A0B4J1U6 Y_RNA.51-201ENST00000362725 102 ntBASIC0.56□□□□□ -2.32
TRBV9A0A0B4J1U6 RNA5SP264-201ENST00000363115 107 ntBASIC0.56□□□□□ -2.32
TRBV9A0A0B4J1U6 SNORD68-201ENST00000363214 84 ntBASIC0.56□□□□□ -2.32
TRBV9A0A0B4J1U6 RNU6-1059P-201ENST00000363752 98 ntBASIC0.56□□□□□ -2.32
TRBV9A0A0B4J1U6 RNU6-879P-201ENST00000364328 108 ntBASIC0.56□□□□□ -2.32
TRBV9A0A0B4J1U6 RNU6-1013P-201ENST00000384180 107 ntBASIC0.56□□□□□ -2.32
TRBV9A0A0B4J1U6 Y_RNA.498-201ENST00000384460 102 ntBASIC0.56□□□□□ -2.32
TRBV9A0A0B4J1U6 RNU6-136P-201ENST00000384663 107 ntBASIC0.56□□□□□ -2.32
TRBV9A0A0B4J1U6 MIR329-1-201ENST00000385028 80 ntBASIC0.56□□□□□ -2.32
TRBV9A0A0B4J1U6 ELOCP21-201ENST00000412558 336 ntBASIC0.56□□□□□ -2.32
TRBV9A0A0B4J1U6 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.56□□□□□ -2.32
TRBV9A0A0B4J1U6 AL035398.1-201ENST00000430869 322 ntBASIC0.56□□□□□ -2.32
TRBV9A0A0B4J1U6 MTND4LP16-201ENST00000440828 295 ntBASIC0.56□□□□□ -2.32
TRBV9A0A0B4J1U6 Z98949.2-201ENST00000440996 144 ntBASIC0.56□□□□□ -2.32
TRBV9A0A0B4J1U6 COX6CP6-201ENST00000490840 228 ntBASIC0.56□□□□□ -2.32
TRBV9A0A0B4J1U6 AC074133.1-201ENST00000515696 183 ntBASIC0.56□□□□□ -2.32
TRBV9A0A0B4J1U6 MIR3192-201ENST00000584920 77 ntBASIC0.56□□□□□ -2.32
TRBV9A0A0B4J1U6 MIR6128-201ENST00000615528 109 ntBASIC0.56□□□□□ -2.32
TRBV9A0A0B4J1U6 AC007014.2-201ENST00000615581 479 ntBASIC0.56□□□□□ -2.32
TRBV9A0A0B4J1U6 AC027279.3-201ENST00000625055 122 ntBASIC0.56□□□□□ -2.32
TRBV9A0A0B4J1U6 U6.115-201ENST00000636045 103 ntBASIC0.56□□□□□ -2.32
TRBV9A0A0B4J1U6 Y_RNA.48-201ENST00000362710 103 ntBASIC0.55□□□□□ -2.32
TRBV9A0A0B4J1U6 SNORD114-22-201ENST00000365423 72 ntBASIC0.55□□□□□ -2.32
TRBV9A0A0B4J1U6 RNU6-700P-201ENST00000391043 107 ntBASIC0.55□□□□□ -2.32
TRBV9A0A0B4J1U6 MIR190B-201ENST00000401119 79 ntBASIC0.55□□□□□ -2.32
TRBV9A0A0B4J1U6 RNA5SP475-201ENST00000410568 110 ntBASIC0.55□□□□□ -2.32
TRBV9A0A0B4J1U6 Y_RNA.621-201ENST00000411065 96 ntBASIC0.55□□□□□ -2.32
TRBV9A0A0B4J1U6 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.55□□□□□ -2.32
TRBV9A0A0B4J1U6 EIF1P2-201ENST00000428233 350 ntBASIC0.55□□□□□ -2.32
TRBV9A0A0B4J1U6 USP9YP30-201ENST00000430729 455 ntBASIC0.55□□□□□ -2.32
TRBV9A0A0B4J1U6 UBE2V1P7-201ENST00000446395 340 ntBASIC0.55□□□□□ -2.32
TRBV9A0A0B4J1U6 RPS20P10-201ENST00000451209 253 ntBASIC0.55□□□□□ -2.32
TRBV9A0A0B4J1U6 RNU6-625P-201ENST00000459412 107 ntBASIC0.55□□□□□ -2.32
TRBV9A0A0B4J1U6 RNU6-864P-201ENST00000516256 108 ntBASIC0.55□□□□□ -2.32
TRBV9A0A0B4J1U6 RNU6-314P-201ENST00000516574 104 ntBASIC0.55□□□□□ -2.32
TRBV9A0A0B4J1U6 AC109635.3-201ENST00000529536 185 ntBASIC0.55□□□□□ -2.32
TRBV9A0A0B4J1U6 AC018448.1-201ENST00000552843 316 ntBASIC0.55□□□□□ -2.32
TRBV9A0A0B4J1U6 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.55□□□□□ -2.32
TRBV9A0A0B4J1U6 AC023827.1-201ENST00000569247 97 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 199.7 ms