Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 PGBD4P5-201ENST00000445958 426 ntBASIC1.05□□□□□ -2.24
CLCF1Q9UBD9 MRPS10P1-201ENST00000448483 130 ntBASIC1.05□□□□□ -2.24
CLCF1Q9UBD9 AC010469.2-201ENST00000496412 480 ntBASIC1.05□□□□□ -2.24
CLCF1Q9UBD9 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.05□□□□□ -2.24
CLCF1Q9UBD9 AC116353.2-201ENST00000505332 712 ntBASIC1.05□□□□□ -2.24
CLCF1Q9UBD9 SNORA31.10-201ENST00000516482 106 ntBASIC1.05□□□□□ -2.24
CLCF1Q9UBD9 RAB11AP2-201ENST00000545905 639 ntBASIC1.05□□□□□ -2.24
CLCF1Q9UBD9 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.05□□□□□ -2.24
CLCF1Q9UBD9 AC125232.2-201ENST00000592457 143 ntBASIC1.05□□□□□ -2.24
CLCF1Q9UBD9 AL162424.1-201ENST00000602325 221 ntBASIC1.05□□□□□ -2.24
CLCF1Q9UBD9 AC009229.3-201ENST00000608056 282 ntBASIC1.05□□□□□ -2.24
CLCF1Q9UBD9 AC084782.3-201ENST00000612282 578 ntBASIC1.05□□□□□ -2.24
CLCF1Q9UBD9 U6atac.1-201ENST00000616025 117 ntBASIC1.05□□□□□ -2.24
CLCF1Q9UBD9 RNU1-22P-201ENST00000363334 158 ntBASIC1.04□□□□□ -2.24
CLCF1Q9UBD9 SNORD26-201ENST00000384147 75 ntBASIC1.04□□□□□ -2.24
CLCF1Q9UBD9 RNU6-1145P-201ENST00000384246 107 ntBASIC1.04□□□□□ -2.24
CLCF1Q9UBD9 MTCYBP4-201ENST00000401524 249 ntBASIC1.04□□□□□ -2.24
CLCF1Q9UBD9 AL034345.1-201ENST00000407768 123 ntBASIC1.04□□□□□ -2.24
CLCF1Q9UBD9 RPL30P13-201ENST00000418873 348 ntBASIC1.04□□□□□ -2.24
CLCF1Q9UBD9 AL353997.1-201ENST00000432936 108 ntBASIC1.04□□□□□ -2.24
CLCF1Q9UBD9 MTND3P10-201ENST00000450967 341 ntBASIC1.04□□□□□ -2.24
CLCF1Q9UBD9 PCNPP5-201ENST00000452246 481 ntBASIC1.04□□□□□ -2.24
CLCF1Q9UBD9 RPL30P7-201ENST00000479312 323 ntBASIC1.04□□□□□ -2.24
CLCF1Q9UBD9 RPL7P42-201ENST00000481005 679 ntBASIC1.04□□□□□ -2.24
CLCF1Q9UBD9 AC074133.1-201ENST00000515696 183 ntBASIC1.04□□□□□ -2.24
CLCF1Q9UBD9 RNU7-30P-201ENST00000516835 62 ntBASIC1.04□□□□□ -2.24
CLCF1Q9UBD9 RNA5SP102-201ENST00000516865 106 ntBASIC1.04□□□□□ -2.24
CLCF1Q9UBD9 AC027419.1-201ENST00000522976 328 ntBASIC1.04□□□□□ -2.24
CLCF1Q9UBD9 AC090821.2-201ENST00000523552 176 ntBASIC1.04□□□□□ -2.24
CLCF1Q9UBD9 AC023157.2-201ENST00000540596 141 ntBASIC1.04□□□□□ -2.24
CLCF1Q9UBD9 AC080078.3-201ENST00000605407 463 ntBASIC1.04□□□□□ -2.24
CLCF1Q9UBD9 AL365434.2-201ENST00000607979 234 ntBASIC1.04□□□□□ -2.24
CLCF1Q9UBD9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.04□□□□□ -2.24
CLCF1Q9UBD9 AC104260.1-201ENST00000616660 539 ntBASIC1.04□□□□□ -2.24
CLCF1Q9UBD9 AC099654.5-201ENST00000636479 350 ntBASIC1.04□□□□□ -2.24
CLCF1Q9UBD9 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
CLCF1Q9UBD9 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
CLCF1Q9UBD9 AC091812.1-201ENST00000432235 1948 ntBASIC1.03□□□□□ -2.24
CLCF1Q9UBD9 AC018630.2-201ENST00000534866 2403 ntBASIC1.03□□□□□ -2.24
CLCF1Q9UBD9 Y_RNA.88-201ENST00000363029 99 ntBASIC1.03□□□□□ -2.24
CLCF1Q9UBD9 RNU6-879P-201ENST00000364328 108 ntBASIC1.03□□□□□ -2.24
CLCF1Q9UBD9 Y_RNA.557-201ENST00000384680 107 ntBASIC1.03□□□□□ -2.24
CLCF1Q9UBD9 MIR499A-201ENST00000384903 122 ntBASIC1.03□□□□□ -2.24
CLCF1Q9UBD9 ELOCP21-201ENST00000412558 336 ntBASIC1.03□□□□□ -2.24
CLCF1Q9UBD9 RPL23AP50-201ENST00000434149 455 ntBASIC1.03□□□□□ -2.24
CLCF1Q9UBD9 AC093852.1-201ENST00000503587 266 ntBASIC1.03□□□□□ -2.24
CLCF1Q9UBD9 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.03□□□□□ -2.24
CLCF1Q9UBD9 RN7SKP179-201ENST00000516126 217 ntBASIC1.03□□□□□ -2.24
CLCF1Q9UBD9 SUMO2P16-201ENST00000519475 264 ntBASIC1.03□□□□□ -2.24
CLCF1Q9UBD9 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.03□□□□□ -2.24
CLCF1Q9UBD9 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.03□□□□□ -2.24
CLCF1Q9UBD9 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.03□□□□□ -2.24
CLCF1Q9UBD9 AL390123.1-201ENST00000603216 237 ntBASIC1.03□□□□□ -2.24
CLCF1Q9UBD9 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.03□□□□□ -2.24
CLCF1Q9UBD9 AC092794.2-201ENST00000620933 563 ntBASIC1.03□□□□□ -2.24
CLCF1Q9UBD9 AC098679.4-201ENST00000624241 654 ntBASIC1.03□□□□□ -2.24
CLCF1Q9UBD9 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.03□□□□□ -2.24
CLCF1Q9UBD9 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 RNU6-874P-201ENST00000362390 105 ntBASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 SNORA20B-201ENST00000384220 132 ntBASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 Y_RNA.498-201ENST00000384460 102 ntBASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 MIR1287-201ENST00000408492 90 ntBASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 MTCO3P19-201ENST00000415864 321 ntBASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 AC092423.1-201ENST00000430165 186 ntBASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 AC015922.2-201ENST00000435593 184 ntBASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 COX6CP14-201ENST00000469580 174 ntBASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 RPL17P19-201ENST00000489069 552 ntBASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 RN7SKP49-201ENST00000516675 260 ntBASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 AC022868.1-201ENST00000517767 391 ntBASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 MTND4LP26-201ENST00000518144 282 ntBASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 AL512310.8-201ENST00000550183 120 ntBASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 RPL21P9-201ENST00000556149 474 ntBASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 AC073544.1-201ENST00000600110 1595 ntBASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 SNORA28-201ENST00000606769 126 ntBASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 AL021879.1-201ENST00000611756 288 ntBASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 AC092794.1-201ENST00000612734 582 ntBASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 CASC19-280ENST00000642102 1351 ntBASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.02□□□□□ -2.25
CLCF1Q9UBD9 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
CLCF1Q9UBD9 MIR26B-201ENST00000362251 77 ntBASIC1.01□□□□□ -2.25
CLCF1Q9UBD9 RNU6-845P-201ENST00000362578 103 ntBASIC1.01□□□□□ -2.25
CLCF1Q9UBD9 Y_RNA.160-201ENST00000363677 92 ntBASIC1.01□□□□□ -2.25
CLCF1Q9UBD9 Y_RNA.358-201ENST00000365491 99 ntBASIC1.01□□□□□ -2.25
CLCF1Q9UBD9 Y_RNA.404-201ENST00000383978 102 ntBASIC1.01□□□□□ -2.25
CLCF1Q9UBD9 MIR562-201ENST00000384894 95 ntBASIC1.01□□□□□ -2.25
CLCF1Q9UBD9 SNORA75.4-201ENST00000391278 119 ntBASIC1.01□□□□□ -2.25
CLCF1Q9UBD9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.01□□□□□ -2.25
CLCF1Q9UBD9 AC097462.1-201ENST00000514125 324 ntBASIC1.01□□□□□ -2.25
CLCF1Q9UBD9 SCARNA16.2-201ENST00000516520 172 ntBASIC1.01□□□□□ -2.25
CLCF1Q9UBD9 RNU7-172P-201ENST00000517125 64 ntBASIC1.01□□□□□ -2.25
CLCF1Q9UBD9 AC018448.1-201ENST00000552843 316 ntBASIC1.01□□□□□ -2.25
CLCF1Q9UBD9 CYP3A52P-201ENST00000563326 91 ntBASIC1.01□□□□□ -2.25
CLCF1Q9UBD9 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.01□□□□□ -2.25
CLCF1Q9UBD9 AC073349.3-201ENST00000617616 186 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 247.5 ms