Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 PRR13P7-201ENST00000605538 430 ntBASIC2.17□□□□□ -2.06
HMGB4Q8WW32 AC009831.4-201ENST00000620744 325 ntBASIC2.17□□□□□ -2.06
HMGB4Q8WW32 AC006435.5-201ENST00000624486 112 ntBASIC2.17□□□□□ -2.06
HMGB4Q8WW32 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
HMGB4Q8WW32 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HMGB4Q8WW32 RNU6-862P-201ENST00000362804 105 ntBASIC2.16□□□□□ -2.06
HMGB4Q8WW32 SNORD113-8-201ENST00000363497 74 ntBASIC2.16□□□□□ -2.06
HMGB4Q8WW32 SNORA16B-201ENST00000364674 135 ntBASIC2.16□□□□□ -2.06
HMGB4Q8WW32 Y_RNA.331-201ENST00000365267 102 ntBASIC2.16□□□□□ -2.06
HMGB4Q8WW32 RNU6-417P-201ENST00000384712 107 ntBASIC2.16□□□□□ -2.06
HMGB4Q8WW32 RNU4-30P-201ENST00000410245 143 ntBASIC2.16□□□□□ -2.06
HMGB4Q8WW32 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
HMGB4Q8WW32 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC2.16□□□□□ -2.06
HMGB4Q8WW32 AL358176.2-201ENST00000425769 204 ntBASIC2.16□□□□□ -2.06
HMGB4Q8WW32 CR769767.1-201ENST00000436337 346 ntBASIC2.16□□□□□ -2.06
HMGB4Q8WW32 SUMO1P2-201ENST00000452524 304 ntBASIC2.16□□□□□ -2.06
HMGB4Q8WW32 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.16□□□□□ -2.06
HMGB4Q8WW32 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
HMGB4Q8WW32 RNU6-1143P-201ENST00000516125 104 ntBASIC2.16□□□□□ -2.06
HMGB4Q8WW32 SNORA31.11-201ENST00000516528 139 ntBASIC2.16□□□□□ -2.06
HMGB4Q8WW32 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.16□□□□□ -2.06
HMGB4Q8WW32 MDM2-232ENST00000544561 213 ntTSL 5 BASIC2.16□□□□□ -2.06
HMGB4Q8WW32 SDR42E1P4-201ENST00000620894 481 ntBASIC2.16□□□□□ -2.06
HMGB4Q8WW32 Y_RNA.64-201ENST00000362845 102 ntBASIC2.15□□□□□ -2.07
HMGB4Q8WW32 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC2.15□□□□□ -2.07
HMGB4Q8WW32 SNORA48.1-201ENST00000390879 135 ntBASIC2.15□□□□□ -2.07
HMGB4Q8WW32 U3.40-201ENST00000408706 208 ntBASIC2.15□□□□□ -2.07
HMGB4Q8WW32 RNA5SP501-201ENST00000410990 112 ntBASIC2.15□□□□□ -2.07
HMGB4Q8WW32 HMGN2P23-201ENST00000456759 269 ntBASIC2.15□□□□□ -2.07
HMGB4Q8WW32 RNA5SP82-201ENST00000516707 92 ntBASIC2.15□□□□□ -2.07
HMGB4Q8WW32 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.15□□□□□ -2.07
HMGB4Q8WW32 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.15□□□□□ -2.07
HMGB4Q8WW32 SNORD113-5-201ENST00000607261 78 ntBASIC2.15□□□□□ -2.07
HMGB4Q8WW32 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.15□□□□□ -2.07
HMGB4Q8WW32 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
HMGB4Q8WW32 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
HMGB4Q8WW32 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
HMGB4Q8WW32 SNORD114-7-201ENST00000362520 77 ntBASIC2.14□□□□□ -2.07
HMGB4Q8WW32 SNORA27.1-201ENST00000362604 124 ntBASIC2.14□□□□□ -2.07
HMGB4Q8WW32 SNORD81.1-201ENST00000363064 77 ntBASIC2.14□□□□□ -2.07
HMGB4Q8WW32 RNU6-21P-201ENST00000384710 107 ntBASIC2.14□□□□□ -2.07
HMGB4Q8WW32 AL031003.1-201ENST00000404229 172 ntBASIC2.14□□□□□ -2.07
HMGB4Q8WW32 CST2P1-201ENST00000425770 87 ntBASIC2.14□□□□□ -2.07
HMGB4Q8WW32 AL603825.1-201ENST00000438481 80 ntBASIC2.14□□□□□ -2.07
HMGB4Q8WW32 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.14□□□□□ -2.07
HMGB4Q8WW32 AC098869.1-201ENST00000481627 292 ntBASIC2.14□□□□□ -2.07
HMGB4Q8WW32 HMGB3P17-201ENST00000504195 649 ntBASIC2.14□□□□□ -2.07
HMGB4Q8WW32 SEPT14P8-201ENST00000508026 178 ntBASIC2.14□□□□□ -2.07
HMGB4Q8WW32 RNU6-635P-201ENST00000516651 102 ntBASIC2.14□□□□□ -2.07
HMGB4Q8WW32 RNU6-295P-201ENST00000516901 104 ntBASIC2.14□□□□□ -2.07
HMGB4Q8WW32 AC027419.1-201ENST00000522976 328 ntBASIC2.14□□□□□ -2.07
HMGB4Q8WW32 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.14□□□□□ -2.07
HMGB4Q8WW32 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.14□□□□□ -2.07
HMGB4Q8WW32 MYL12BP1-201ENST00000569826 507 ntBASIC2.14□□□□□ -2.07
HMGB4Q8WW32 AC007229.1-201ENST00000590455 412 ntBASIC2.14□□□□□ -2.07
HMGB4Q8WW32 AC078899.2-201ENST00000595282 212 ntBASIC2.14□□□□□ -2.07
HMGB4Q8WW32 MIR6895-201ENST00000613497 78 ntBASIC2.14□□□□□ -2.07
HMGB4Q8WW32 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.14□□□□□ -2.07
HMGB4Q8WW32 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.14□□□□□ -2.07
HMGB4Q8WW32 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
HMGB4Q8WW32 AC005336.3-201ENST00000623833 2679 ntBASIC2.14□□□□□ -2.07
HMGB4Q8WW32 RNU1-96P-201ENST00000364163 162 ntBASIC2.13□□□□□ -2.07
HMGB4Q8WW32 Y_RNA.286-201ENST00000364813 102 ntBASIC2.13□□□□□ -2.07
HMGB4Q8WW32 RNU6-1105P-201ENST00000384774 107 ntBASIC2.13□□□□□ -2.07
HMGB4Q8WW32 Y_RNA.581-201ENST00000391017 97 ntBASIC2.13□□□□□ -2.07
HMGB4Q8WW32 MIR873-201ENST00000401120 77 ntBASIC2.13□□□□□ -2.07
HMGB4Q8WW32 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.13□□□□□ -2.07
HMGB4Q8WW32 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.13□□□□□ -2.07
HMGB4Q8WW32 RPL21P38-201ENST00000418090 167 ntBASIC2.13□□□□□ -2.07
HMGB4Q8WW32 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.13□□□□□ -2.07
HMGB4Q8WW32 AC096920.1-201ENST00000423991 241 ntBASIC2.13□□□□□ -2.07
HMGB4Q8WW32 DYNLT3P2-201ENST00000442517 295 ntBASIC2.13□□□□□ -2.07
HMGB4Q8WW32 RPL23AP3-201ENST00000453844 468 ntBASIC2.13□□□□□ -2.07
HMGB4Q8WW32 RNU6-496P-201ENST00000516145 99 ntBASIC2.13□□□□□ -2.07
HMGB4Q8WW32 RNU6-436P-201ENST00000516171 114 ntBASIC2.13□□□□□ -2.07
HMGB4Q8WW32 RNA5SP458-201ENST00000516188 119 ntBASIC2.13□□□□□ -2.07
HMGB4Q8WW32 RNVU1-2-201ENST00000516326 135 ntBASIC2.13□□□□□ -2.07
HMGB4Q8WW32 AP003733.2-201ENST00000529409 171 ntBASIC2.13□□□□□ -2.07
HMGB4Q8WW32 AL137100.2-201ENST00000555786 315 ntBASIC2.13□□□□□ -2.07
HMGB4Q8WW32 AC008269.2-201ENST00000561915 1105 ntBASIC2.13□□□□□ -2.07
HMGB4Q8WW32 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.13□□□□□ -2.07
HMGB4Q8WW32 U6.73-201ENST00000619194 103 ntBASIC2.13□□□□□ -2.07
HMGB4Q8WW32 CENPCP1-201ENST00000533085 2578 ntBASIC2.13□□□□□ -2.07
HMGB4Q8WW32 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
HMGB4Q8WW32 snoU2_19.2-201ENST00000363024 80 ntBASIC2.12□□□□□ -2.07
HMGB4Q8WW32 Y_RNA.124-201ENST00000363339 93 ntBASIC2.12□□□□□ -2.07
HMGB4Q8WW32 SNORA33-201ENST00000363664 130 ntBASIC2.12□□□□□ -2.07
HMGB4Q8WW32 RNU6-271P-201ENST00000363858 105 ntBASIC2.12□□□□□ -2.07
HMGB4Q8WW32 Y_RNA.222-201ENST00000364264 102 ntBASIC2.12□□□□□ -2.07
HMGB4Q8WW32 RNU6-102P-201ENST00000384485 104 ntBASIC2.12□□□□□ -2.07
HMGB4Q8WW32 RNA5SP467-201ENST00000391274 118 ntBASIC2.12□□□□□ -2.07
HMGB4Q8WW32 Y_RNA.602-201ENST00000410535 92 ntBASIC2.12□□□□□ -2.07
HMGB4Q8WW32 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.12□□□□□ -2.07
HMGB4Q8WW32 AL445646.1-201ENST00000431784 216 ntBASIC2.12□□□□□ -2.07
HMGB4Q8WW32 IPO7P1-201ENST00000442031 636 ntBASIC2.12□□□□□ -2.07
HMGB4Q8WW32 MRPS10P1-201ENST00000448483 130 ntBASIC2.12□□□□□ -2.07
HMGB4Q8WW32 RPL23AP7-203ENST00000449021 469 ntBASIC2.12□□□□□ -2.07
HMGB4Q8WW32 HSPE1P25-201ENST00000455484 251 ntBASIC2.12□□□□□ -2.07
HMGB4Q8WW32 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.12□□□□□ -2.07
HMGB4Q8WW32 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms