Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
SYNE4Q8N205 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
SYNE4Q8N205 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.87□□□□□ -1.95
SYNE4Q8N205 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.86□□□□□ -1.95
SYNE4Q8N205 Y_RNA.118-201ENST00000363300 101 ntBASIC2.86□□□□□ -1.95
SYNE4Q8N205 RNU1-51P-201ENST00000365345 176 ntBASIC2.86□□□□□ -1.95
SYNE4Q8N205 RNU6-245P-201ENST00000384020 107 ntBASIC2.86□□□□□ -1.95
SYNE4Q8N205 Y_RNA.571-201ENST00000384753 98 ntBASIC2.86□□□□□ -1.95
SYNE4Q8N205 snoU13.14-201ENST00000459372 104 ntBASIC2.86□□□□□ -1.95
SYNE4Q8N205 RPS29P12-201ENST00000460178 152 ntBASIC2.86□□□□□ -1.95
SYNE4Q8N205 RPL36AP48-201ENST00000485521 314 ntBASIC2.86□□□□□ -1.95
SYNE4Q8N205 MIR5692C2-201ENST00000577959 77 ntBASIC2.86□□□□□ -1.95
SYNE4Q8N205 AP000942.3-201ENST00000603702 160 ntBASIC2.86□□□□□ -1.95
SYNE4Q8N205 PCGEM1.1-201ENST00000613431 131 ntBASIC2.86□□□□□ -1.95
SYNE4Q8N205 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
SYNE4Q8N205 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
SYNE4Q8N205 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.85□□□□□ -1.95
SYNE4Q8N205 RNU6-1048P-201ENST00000364054 107 ntBASIC2.85□□□□□ -1.95
SYNE4Q8N205 RNU6-801P-201ENST00000364087 105 ntBASIC2.85□□□□□ -1.95
SYNE4Q8N205 RNU4-10P-201ENST00000364383 140 ntBASIC2.85□□□□□ -1.95
SYNE4Q8N205 Y_RNA.272-201ENST00000364696 102 ntBASIC2.85□□□□□ -1.95
SYNE4Q8N205 MIR221-201ENST00000385135 110 ntBASIC2.85□□□□□ -1.95
SYNE4Q8N205 RNU6-131P-201ENST00000391144 107 ntBASIC2.85□□□□□ -1.95
SYNE4Q8N205 SNORA12-201ENST00000391162 147 ntBASIC2.85□□□□□ -1.95
SYNE4Q8N205 SNORA26.5-201ENST00000391215 123 ntBASIC2.85□□□□□ -1.95
SYNE4Q8N205 U3.40-201ENST00000408706 208 ntBASIC2.85□□□□□ -1.95
SYNE4Q8N205 RNU6-1328P-201ENST00000410938 106 ntBASIC2.85□□□□□ -1.95
SYNE4Q8N205 AC027124.2-201ENST00000428249 105 ntBASIC2.85□□□□□ -1.95
SYNE4Q8N205 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.85□□□□□ -1.95
SYNE4Q8N205 RPL23AP42-201ENST00000471152 471 ntBASIC2.85□□□□□ -1.95
SYNE4Q8N205 RNA5SP272-201ENST00000516095 111 ntBASIC2.85□□□□□ -1.95
SYNE4Q8N205 AC115990.1-201ENST00000526957 301 ntBASIC2.85□□□□□ -1.95
SYNE4Q8N205 MIR3136-201ENST00000583498 78 ntBASIC2.85□□□□□ -1.95
SYNE4Q8N205 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.85□□□□□ -1.95
SYNE4Q8N205 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.85□□□□□ -1.95
SYNE4Q8N205 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
SYNE4Q8N205 RNU1-62P-201ENST00000362599 164 ntBASIC2.84□□□□□ -1.95
SYNE4Q8N205 SNORA18.2-201ENST00000383865 132 ntBASIC2.84□□□□□ -1.95
SYNE4Q8N205 Y_RNA.572-201ENST00000384757 98 ntBASIC2.84□□□□□ -1.95
SYNE4Q8N205 SNORA26.7-201ENST00000391288 122 ntBASIC2.84□□□□□ -1.95
SYNE4Q8N205 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.84□□□□□ -1.95
SYNE4Q8N205 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.84□□□□□ -1.95
SYNE4Q8N205 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.84□□□□□ -1.95
SYNE4Q8N205 RNU6-107P-201ENST00000516643 102 ntBASIC2.84□□□□□ -1.95
SYNE4Q8N205 RNU1-117P-201ENST00000517041 158 ntBASIC2.84□□□□□ -1.95
SYNE4Q8N205 SCARNA11.3-201ENST00000517276 130 ntBASIC2.84□□□□□ -1.95
SYNE4Q8N205 AC007536.1-201ENST00000533382 349 ntBASIC2.84□□□□□ -1.95
SYNE4Q8N205 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.84□□□□□ -1.95
SYNE4Q8N205 MIR3923-201ENST00000579521 83 ntBASIC2.84□□□□□ -1.95
SYNE4Q8N205 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.84□□□□□ -1.95
SYNE4Q8N205 MIR4781-201ENST00000585250 76 ntBASIC2.84□□□□□ -1.95
SYNE4Q8N205 AC108706.1-201ENST00000611053 297 ntBASIC2.84□□□□□ -1.95
SYNE4Q8N205 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.84□□□□□ -1.95
SYNE4Q8N205 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
SYNE4Q8N205 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.83□□□□□ -1.96
SYNE4Q8N205 AC134026.1-201ENST00000623249 2239 ntBASIC2.83□□□□□ -1.96
SYNE4Q8N205 SNORD50.2-201ENST00000365465 70 ntBASIC2.83□□□□□ -1.96
SYNE4Q8N205 RNU6-81P-201ENST00000365608 104 ntBASIC2.83□□□□□ -1.96
SYNE4Q8N205 RNU6-1083P-201ENST00000384022 107 ntBASIC2.83□□□□□ -1.96
SYNE4Q8N205 RNU1-57P-201ENST00000384491 166 ntBASIC2.83□□□□□ -1.96
SYNE4Q8N205 AC092427.1-202ENST00000430569 476 ntBASIC2.83□□□□□ -1.96
SYNE4Q8N205 SEPT7P4-201ENST00000437076 306 ntBASIC2.83□□□□□ -1.96
SYNE4Q8N205 AC004386.2-201ENST00000441858 148 ntBASIC2.83□□□□□ -1.96
SYNE4Q8N205 AC145146.1-201ENST00000496370 254 ntBASIC2.83□□□□□ -1.96
SYNE4Q8N205 AC108729.3-201ENST00000513484 108 ntBASIC2.83□□□□□ -1.96
SYNE4Q8N205 HSPE1P18-201ENST00000517602 280 ntBASIC2.83□□□□□ -1.96
SYNE4Q8N205 AP005660.1-201ENST00000522972 293 ntBASIC2.83□□□□□ -1.96
SYNE4Q8N205 AC100767.1-201ENST00000528178 123 ntBASIC2.83□□□□□ -1.96
SYNE4Q8N205 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.83□□□□□ -1.96
SYNE4Q8N205 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.82□□□□□ -1.96
SYNE4Q8N205 RNU6-324P-201ENST00000363957 106 ntBASIC2.82□□□□□ -1.96
SYNE4Q8N205 SNORD115-30-201ENST00000364117 82 ntBASIC2.82□□□□□ -1.96
SYNE4Q8N205 U8.9-201ENST00000365667 134 ntBASIC2.82□□□□□ -1.96
SYNE4Q8N205 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
SYNE4Q8N205 AC097463.2-201ENST00000421074 142 ntBASIC2.82□□□□□ -1.96
SYNE4Q8N205 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.82□□□□□ -1.96
SYNE4Q8N205 RNU6-1053P-201ENST00000515930 101 ntBASIC2.82□□□□□ -1.96
SYNE4Q8N205 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.82□□□□□ -1.96
SYNE4Q8N205 CYCSP23-201ENST00000519781 313 ntBASIC2.82□□□□□ -1.96
SYNE4Q8N205 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.82□□□□□ -1.96
SYNE4Q8N205 MIR4765-201ENST00000585007 77 ntBASIC2.82□□□□□ -1.96
SYNE4Q8N205 AL356575.1-201ENST00000603008 283 ntBASIC2.82□□□□□ -1.96
SYNE4Q8N205 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SYNE4Q8N205 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SYNE4Q8N205 snoU2_19.1-201ENST00000362361 80 ntBASIC2.81□□□□□ -1.96
SYNE4Q8N205 snoU2_19.4-201ENST00000364329 80 ntBASIC2.81□□□□□ -1.96
SYNE4Q8N205 RNU6-1264P-201ENST00000383891 107 ntBASIC2.81□□□□□ -1.96
SYNE4Q8N205 SNORA67.2-201ENST00000384300 149 ntBASIC2.81□□□□□ -1.96
SYNE4Q8N205 RNA5SP475-201ENST00000410568 110 ntBASIC2.81□□□□□ -1.96
SYNE4Q8N205 RNA5SP344-201ENST00000411081 104 ntBASIC2.81□□□□□ -1.96
SYNE4Q8N205 EIF4EP4-201ENST00000424916 578 ntBASIC2.81□□□□□ -1.96
SYNE4Q8N205 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SYNE4Q8N205 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.81□□□□□ -1.96
SYNE4Q8N205 AC005562.2-201ENST00000618264 111 ntBASIC2.81□□□□□ -1.96
SYNE4Q8N205 MIR7515-201ENST00000637837 67 ntBASIC2.81□□□□□ -1.96
SYNE4Q8N205 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.8□□□□□ -1.96
SYNE4Q8N205 Y_RNA.7-201ENST00000362352 102 ntBASIC2.8□□□□□ -1.96
SYNE4Q8N205 RNU6-655P-201ENST00000362858 107 ntBASIC2.8□□□□□ -1.96
SYNE4Q8N205 RNU6-1210P-201ENST00000363775 107 ntBASIC2.8□□□□□ -1.96
SYNE4Q8N205 Y_RNA.182-201ENST00000363880 111 ntBASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 165.7 ms