Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
HMGCLP35914 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
HMGCLP35914 RNU6-454P-201ENST00000364292 107 ntBASIC1.44□□□□□ -2.18
HMGCLP35914 RNU6-879P-201ENST00000364328 108 ntBASIC1.44□□□□□ -2.18
HMGCLP35914 Y_RNA.428-201ENST00000384078 102 ntBASIC1.44□□□□□ -2.18
HMGCLP35914 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.44□□□□□ -2.18
HMGCLP35914 SNORD65B-201ENST00000459126 73 ntBASIC1.44□□□□□ -2.18
HMGCLP35914 RNA5SP57-201ENST00000459463 123 ntBASIC1.44□□□□□ -2.18
HMGCLP35914 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.44□□□□□ -2.18
HMGCLP35914 SNORA40.14-201ENST00000516543 86 ntBASIC1.44□□□□□ -2.18
HMGCLP35914 SNORD116.3-201ENST00000517176 78 ntBASIC1.44□□□□□ -2.18
HMGCLP35914 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.44□□□□□ -2.18
HMGCLP35914 AC069114.2-201ENST00000604699 304 ntBASIC1.44□□□□□ -2.18
HMGCLP35914 AC016925.2-201ENST00000605108 242 ntBASIC1.44□□□□□ -2.18
HMGCLP35914 SNORD58B-201ENST00000607313 66 ntBASIC1.44□□□□□ -2.18
HMGCLP35914 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.44□□□□□ -2.18
HMGCLP35914 ZNF72P-201ENST00000425869 1908 ntBASIC1.44□□□□□ -2.18
HMGCLP35914 SNORA33-201ENST00000363664 130 ntBASIC1.43□□□□□ -2.18
HMGCLP35914 Y_RNA.243-201ENST00000364481 109 ntBASIC1.43□□□□□ -2.18
HMGCLP35914 RNY1P14-201ENST00000384426 108 ntBASIC1.43□□□□□ -2.18
HMGCLP35914 RAB28P5-201ENST00000427490 651 ntBASIC1.43□□□□□ -2.18
HMGCLP35914 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.43□□□□□ -2.18
HMGCLP35914 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.43□□□□□ -2.18
HMGCLP35914 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.43□□□□□ -2.18
HMGCLP35914 UQCRBP2-201ENST00000447827 297 ntBASIC1.43□□□□□ -2.18
HMGCLP35914 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.43□□□□□ -2.18
HMGCLP35914 AC093852.1-201ENST00000503587 266 ntBASIC1.43□□□□□ -2.18
HMGCLP35914 AC010598.1-201ENST00000510378 103 ntBASIC1.43□□□□□ -2.18
HMGCLP35914 AC084364.2-201ENST00000546924 395 ntBASIC1.43□□□□□ -2.18
HMGCLP35914 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC1.43□□□□□ -2.18
HMGCLP35914 MIR5094-201ENST00000578766 85 ntBASIC1.43□□□□□ -2.18
HMGCLP35914 MIR4423-201ENST00000580922 80 ntBASIC1.43□□□□□ -2.18
HMGCLP35914 U6.73-201ENST00000619194 103 ntBASIC1.43□□□□□ -2.18
HMGCLP35914 AL160413.1-201ENST00000622780 310 ntBASIC1.43□□□□□ -2.18
HMGCLP35914 AL606534.2-204ENST00000635008 178 ntBASIC1.43□□□□□ -2.18
HMGCLP35914 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
HMGCLP35914 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
HMGCLP35914 AC010615.1-201ENST00000594254 1764 ntBASIC1.42□□□□□ -2.18
HMGCLP35914 RNU6-661P-201ENST00000362409 107 ntBASIC1.42□□□□□ -2.18
HMGCLP35914 RNA5SP99-201ENST00000364020 114 ntBASIC1.42□□□□□ -2.18
HMGCLP35914 RNY3P11-201ENST00000364153 102 ntBASIC1.42□□□□□ -2.18
HMGCLP35914 SNORA72.2-201ENST00000365028 127 ntBASIC1.42□□□□□ -2.18
HMGCLP35914 Y_RNA.314-201ENST00000365114 102 ntBASIC1.42□□□□□ -2.18
HMGCLP35914 MIR30A-201ENST00000385092 71 ntBASIC1.42□□□□□ -2.18
HMGCLP35914 AL355796.1-201ENST00000406706 323 ntBASIC1.42□□□□□ -2.18
HMGCLP35914 RPS27P1-201ENST00000450552 247 ntBASIC1.42□□□□□ -2.18
HMGCLP35914 HSPE1P24-201ENST00000450782 238 ntBASIC1.42□□□□□ -2.18
HMGCLP35914 AC112492.4-201ENST00000456549 352 ntBASIC1.42□□□□□ -2.18
HMGCLP35914 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.42□□□□□ -2.18
HMGCLP35914 SNORA31.17-201ENST00000516953 127 ntBASIC1.42□□□□□ -2.18
HMGCLP35914 RNU2-12P-201ENST00000517216 168 ntBASIC1.42□□□□□ -2.18
HMGCLP35914 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
HMGCLP35914 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.42□□□□□ -2.18
HMGCLP35914 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.42□□□□□ -2.18
HMGCLP35914 MIR5188-201ENST00000583467 113 ntBASIC1.42□□□□□ -2.18
HMGCLP35914 AL138825.1-201ENST00000618587 192 ntBASIC1.42□□□□□ -2.18
HMGCLP35914 MIR3674-201ENST00000636576 68 ntBASIC1.42□□□□□ -2.18
HMGCLP35914 MTND4P29-201ENST00000503122 1372 ntBASIC1.42□□□□□ -2.18
HMGCLP35914 RNU6-797P-201ENST00000363101 109 ntBASIC1.41□□□□□ -2.18
HMGCLP35914 RNU6-961P-201ENST00000363893 105 ntBASIC1.41□□□□□ -2.18
HMGCLP35914 Y_RNA.419-201ENST00000384041 102 ntBASIC1.41□□□□□ -2.18
HMGCLP35914 RNU6-955P-201ENST00000410497 104 ntBASIC1.41□□□□□ -2.18
HMGCLP35914 AL161935.2-201ENST00000414627 60 ntBASIC1.41□□□□□ -2.18
HMGCLP35914 MTCO3P19-201ENST00000415864 321 ntBASIC1.41□□□□□ -2.18
HMGCLP35914 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.41□□□□□ -2.18
HMGCLP35914 PMCHL1-202ENST00000423102 261 ntBASIC1.41□□□□□ -2.18
HMGCLP35914 SDAD1P3-201ENST00000427380 333 ntBASIC1.41□□□□□ -2.18
HMGCLP35914 SNRPGP13-201ENST00000442212 177 ntBASIC1.41□□□□□ -2.18
HMGCLP35914 FCF1P4-201ENST00000448326 183 ntBASIC1.41□□□□□ -2.18
HMGCLP35914 SUMO1P2-201ENST00000452524 304 ntBASIC1.41□□□□□ -2.18
HMGCLP35914 RNU6-625P-201ENST00000459412 107 ntBASIC1.41□□□□□ -2.18
HMGCLP35914 AC010469.2-201ENST00000496412 480 ntBASIC1.41□□□□□ -2.18
HMGCLP35914 RNU6-1170P-201ENST00000515974 106 ntBASIC1.41□□□□□ -2.18
HMGCLP35914 RNA5SP437-201ENST00000517249 129 ntBASIC1.41□□□□□ -2.18
HMGCLP35914 AC055872.1-201ENST00000570978 278 ntBASIC1.41□□□□□ -2.18
HMGCLP35914 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.41□□□□□ -2.18
HMGCLP35914 AC092447.9-201ENST00000603395 144 ntBASIC1.41□□□□□ -2.18
HMGCLP35914 AC006001.4-201ENST00000622243 395 ntBASIC1.41□□□□□ -2.18
HMGCLP35914 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.41□□□□□ -2.18
HMGCLP35914 U6.115-201ENST00000636045 103 ntBASIC1.41□□□□□ -2.18
HMGCLP35914 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
HMGCLP35914 RNU6-708P-201ENST00000384217 107 ntBASIC1.4□□□□□ -2.19
HMGCLP35914 Y_RNA.460-201ENST00000384255 102 ntBASIC1.4□□□□□ -2.19
HMGCLP35914 RNU6-417P-201ENST00000384712 107 ntBASIC1.4□□□□□ -2.19
HMGCLP35914 MIR520A-201ENST00000384862 85 ntBASIC1.4□□□□□ -2.19
HMGCLP35914 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
HMGCLP35914 RNU6-360P-201ENST00000390944 104 ntBASIC1.4□□□□□ -2.19
HMGCLP35914 SNORD78.2-201ENST00000391076 69 ntBASIC1.4□□□□□ -2.19
HMGCLP35914 MIR1302-11-201ENST00000408051 138 ntBASIC1.4□□□□□ -2.19
HMGCLP35914 MIR1302-9-201ENST00000408365 138 ntBASIC1.4□□□□□ -2.19
HMGCLP35914 MIR1302-10-201ENST00000408734 138 ntBASIC1.4□□□□□ -2.19
HMGCLP35914 RNU4-62P-201ENST00000410125 130 ntBASIC1.4□□□□□ -2.19
HMGCLP35914 AC069257.2-201ENST00000441819 155 ntBASIC1.4□□□□□ -2.19
HMGCLP35914 RPS29P23-201ENST00000458635 123 ntBASIC1.4□□□□□ -2.19
HMGCLP35914 RNU7-99P-201ENST00000516271 62 ntBASIC1.4□□□□□ -2.19
HMGCLP35914 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC1.4□□□□□ -2.19
HMGCLP35914 MIR1302-2-201ENST00000607096 138 ntBASIC1.4□□□□□ -2.19
HMGCLP35914 AL512598.1-201ENST00000610158 273 ntBASIC1.4□□□□□ -2.19
HMGCLP35914 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.4□□□□□ -2.19
HMGCLP35914 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 271.9 ms