Protein–RNA interactions for Protein: P0DPA3

SNHG28, Putative uncharacterized protein SNHG28, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG28P0DPA3 ZNF720P1-201ENST00000562403 1939 ntBASIC2.4□□□□□ -2.03
SNHG28P0DPA3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.39□□□□□ -2.03
SNHG28P0DPA3 Y_RNA.7-201ENST00000362352 102 ntBASIC2.39□□□□□ -2.03
SNHG28P0DPA3 Y_RNA.81-201ENST00000362997 102 ntBASIC2.39□□□□□ -2.03
SNHG28P0DPA3 RNY1P11-201ENST00000363759 113 ntBASIC2.39□□□□□ -2.03
SNHG28P0DPA3 Y_RNA.261-201ENST00000364631 102 ntBASIC2.39□□□□□ -2.03
SNHG28P0DPA3 SNORA72.2-201ENST00000365028 127 ntBASIC2.39□□□□□ -2.03
SNHG28P0DPA3 RNU6-1081P-201ENST00000384537 107 ntBASIC2.39□□□□□ -2.03
SNHG28P0DPA3 RNU6-1168P-201ENST00000390831 104 ntBASIC2.39□□□□□ -2.03
SNHG28P0DPA3 RNU6-381P-201ENST00000391259 108 ntBASIC2.39□□□□□ -2.03
SNHG28P0DPA3 RNA5SP390-201ENST00000410191 113 ntBASIC2.39□□□□□ -2.03
SNHG28P0DPA3 AIMP1P2-201ENST00000425294 312 ntBASIC2.39□□□□□ -2.03
SNHG28P0DPA3 AL714022.1-201ENST00000439897 151 ntBASIC2.39□□□□□ -2.03
SNHG28P0DPA3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.39□□□□□ -2.03
SNHG28P0DPA3 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.39□□□□□ -2.03
SNHG28P0DPA3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC2.39□□□□□ -2.03
SNHG28P0DPA3 RPL23AP70-201ENST00000483361 460 ntBASIC2.39□□□□□ -2.03
SNHG28P0DPA3 RNU6-453P-201ENST00000516819 85 ntBASIC2.39□□□□□ -2.03
SNHG28P0DPA3 RNU6-1198P-201ENST00000516904 67 ntBASIC2.39□□□□□ -2.03
SNHG28P0DPA3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.39□□□□□ -2.03
SNHG28P0DPA3 AC091152.3-201ENST00000604227 325 ntBASIC2.39□□□□□ -2.03
SNHG28P0DPA3 AC005520.5-201ENST00000613926 164 ntBASIC2.39□□□□□ -2.03
SNHG28P0DPA3 MIR3658-201ENST00000636291 56 ntBASIC2.39□□□□□ -2.03
SNHG28P0DPA3 MIR3674-201ENST00000636576 68 ntBASIC2.39□□□□□ -2.03
SNHG28P0DPA3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.39□□□□□ -2.03
SNHG28P0DPA3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.39□□□□□ -2.03
SNHG28P0DPA3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.38□□□□□ -2.03
SNHG28P0DPA3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.38□□□□□ -2.03
SNHG28P0DPA3 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
SNHG28P0DPA3 RNU4-15P-201ENST00000362613 141 ntBASIC2.38□□□□□ -2.03
SNHG28P0DPA3 Y_RNA.75-201ENST00000362927 97 ntBASIC2.38□□□□□ -2.03
SNHG28P0DPA3 Y_RNA.182-201ENST00000363880 111 ntBASIC2.38□□□□□ -2.03
SNHG28P0DPA3 RNU6-449P-201ENST00000383914 107 ntBASIC2.38□□□□□ -2.03
SNHG28P0DPA3 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
SNHG28P0DPA3 RNA5SP201-201ENST00000410316 124 ntBASIC2.38□□□□□ -2.03
SNHG28P0DPA3 AL161651.1-201ENST00000440882 223 ntBASIC2.38□□□□□ -2.03
SNHG28P0DPA3 RNA5SP310-201ENST00000459084 116 ntBASIC2.38□□□□□ -2.03
SNHG28P0DPA3 snoU13.28-201ENST00000459235 104 ntBASIC2.38□□□□□ -2.03
SNHG28P0DPA3 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.38□□□□□ -2.03
SNHG28P0DPA3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.38□□□□□ -2.03
SNHG28P0DPA3 RNU7-121P-201ENST00000516604 62 ntBASIC2.38□□□□□ -2.03
SNHG28P0DPA3 AP005660.1-201ENST00000522972 293 ntBASIC2.38□□□□□ -2.03
SNHG28P0DPA3 CYP4A27P-201ENST00000567218 190 ntBASIC2.38□□□□□ -2.03
SNHG28P0DPA3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.38□□□□□ -2.03
SNHG28P0DPA3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.38□□□□□ -2.03
SNHG28P0DPA3 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC2.38□□□□□ -2.03
SNHG28P0DPA3 AL138880.2-201ENST00000616214 239 ntBASIC2.38□□□□□ -2.03
SNHG28P0DPA3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.38□□□□□ -2.03
SNHG28P0DPA3 ZNF271P-202ENST00000465539 1970 ntBASIC2.38□□□□□ -2.03
SNHG28P0DPA3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SNHG28P0DPA3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.37□□□□□ -2.03
SNHG28P0DPA3 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SNHG28P0DPA3 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
SNHG28P0DPA3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SNHG28P0DPA3 Y_RNA.172-201ENST00000363765 102 ntBASIC2.37□□□□□ -2.03
SNHG28P0DPA3 RNU6-151P-201ENST00000364158 107 ntBASIC2.37□□□□□ -2.03
SNHG28P0DPA3 RNU6-487P-201ENST00000365430 104 ntBASIC2.37□□□□□ -2.03
SNHG28P0DPA3 SNORA67.2-201ENST00000384300 149 ntBASIC2.37□□□□□ -2.03
SNHG28P0DPA3 Y_RNA.488-201ENST00000384403 102 ntBASIC2.37□□□□□ -2.03
SNHG28P0DPA3 SNORA20-201ENST00000384662 132 ntBASIC2.37□□□□□ -2.03
SNHG28P0DPA3 RNU6-1154P-201ENST00000391001 104 ntBASIC2.37□□□□□ -2.03
SNHG28P0DPA3 MIR208B-201ENST00000401172 77 ntBASIC2.37□□□□□ -2.03
SNHG28P0DPA3 RNU6ATAC19P-201ENST00000408096 110 ntBASIC2.37□□□□□ -2.03
SNHG28P0DPA3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.37□□□□□ -2.03
SNHG28P0DPA3 AL031183.1-201ENST00000457667 207 ntBASIC2.37□□□□□ -2.03
SNHG28P0DPA3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.37□□□□□ -2.03
SNHG28P0DPA3 RNU6-479P-201ENST00000516348 105 ntBASIC2.37□□□□□ -2.03
SNHG28P0DPA3 SNORA31.15-201ENST00000516771 132 ntBASIC2.37□□□□□ -2.03
SNHG28P0DPA3 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.37□□□□□ -2.03
SNHG28P0DPA3 MIR4446-201ENST00000578505 67 ntBASIC2.37□□□□□ -2.03
SNHG28P0DPA3 AL049779.4-201ENST00000604500 156 ntBASIC2.37□□□□□ -2.03
SNHG28P0DPA3 PCGEM1.1-201ENST00000613431 131 ntBASIC2.37□□□□□ -2.03
SNHG28P0DPA3 Y_RNA.778-201ENST00000620203 90 ntBASIC2.37□□□□□ -2.03
SNHG28P0DPA3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SNHG28P0DPA3 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SNHG28P0DPA3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.36□□□□□ -2.03
SNHG28P0DPA3 Y_RNA.23-201ENST00000362496 106 ntBASIC2.36□□□□□ -2.03
SNHG28P0DPA3 RNU1-62P-201ENST00000362599 164 ntBASIC2.36□□□□□ -2.03
SNHG28P0DPA3 SNORD115-30-201ENST00000364117 82 ntBASIC2.36□□□□□ -2.03
SNHG28P0DPA3 Y_RNA.218-201ENST00000364218 104 ntBASIC2.36□□□□□ -2.03
SNHG28P0DPA3 RNU6-312P-201ENST00000364629 107 ntBASIC2.36□□□□□ -2.03
SNHG28P0DPA3 RNU6-245P-201ENST00000384020 107 ntBASIC2.36□□□□□ -2.03
SNHG28P0DPA3 SNORD20-201ENST00000384550 80 ntBASIC2.36□□□□□ -2.03
SNHG28P0DPA3 HMGN2P3-201ENST00000433603 273 ntBASIC2.36□□□□□ -2.03
SNHG28P0DPA3 HMGN2P5-201ENST00000436882 273 ntBASIC2.36□□□□□ -2.03
SNHG28P0DPA3 RPL31P41-201ENST00000477967 372 ntBASIC2.36□□□□□ -2.03
SNHG28P0DPA3 RPL30P14-201ENST00000482744 348 ntBASIC2.36□□□□□ -2.03
SNHG28P0DPA3 AP000867.2-201ENST00000532468 320 ntBASIC2.36□□□□□ -2.03
SNHG28P0DPA3 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.36□□□□□ -2.03
SNHG28P0DPA3 Y_RNA.783-201ENST00000613546 102 ntBASIC2.36□□□□□ -2.03
SNHG28P0DPA3 AC012640.5-201ENST00000623897 319 ntBASIC2.36□□□□□ -2.03
SNHG28P0DPA3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
SNHG28P0DPA3 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
SNHG28P0DPA3 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.35□□□□□ -2.03
SNHG28P0DPA3 AC022336.2-201ENST00000568966 2538 ntBASIC2.35□□□□□ -2.03
SNHG28P0DPA3 MIRLET7G-201ENST00000362280 84 ntBASIC2.35□□□□□ -2.03
SNHG28P0DPA3 RNU2-49P-201ENST00000410666 184 ntBASIC2.35□□□□□ -2.03
SNHG28P0DPA3 AC027124.2-201ENST00000428249 105 ntBASIC2.35□□□□□ -2.03
SNHG28P0DPA3 AC010409.1-201ENST00000487382 476 ntBASIC2.35□□□□□ -2.03
SNHG28P0DPA3 RNU6-561P-201ENST00000516222 102 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms