Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.6□□□□□ -2.51
PFDN1O60925 AC005042.3-201ENST00000453230 174 ntBASIC-0.6□□□□□ -2.51
PFDN1O60925 RPL23AP75-201ENST00000491601 451 ntBASIC-0.6□□□□□ -2.51
PFDN1O60925 AC079140.5-201ENST00000507882 310 ntBASIC-0.6□□□□□ -2.51
PFDN1O60925 SNORD27.1-201ENST00000516319 72 ntBASIC-0.6□□□□□ -2.51
PFDN1O60925 RNU6-320P-201ENST00000516511 106 ntBASIC-0.6□□□□□ -2.51
PFDN1O60925 MIR5583-1-201ENST00000580941 59 ntBASIC-0.6□□□□□ -2.51
PFDN1O60925 AC064836.2-201ENST00000609491 462 ntBASIC-0.6□□□□□ -2.51
PFDN1O60925 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.6□□□□□ -2.51
PFDN1O60925 RNU6-1099P-201ENST00000363533 107 ntBASIC-0.61□□□□□ -2.51
PFDN1O60925 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.61□□□□□ -2.51
PFDN1O60925 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.61□□□□□ -2.51
PFDN1O60925 RNU6-136P-201ENST00000384663 107 ntBASIC-0.61□□□□□ -2.51
PFDN1O60925 MIR570-201ENST00000384917 97 ntBASIC-0.61□□□□□ -2.51
PFDN1O60925 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.61□□□□□ -2.51
PFDN1O60925 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.61□□□□□ -2.51
PFDN1O60925 AC091179.3-201ENST00000474761 144 ntBASIC-0.61□□□□□ -2.51
PFDN1O60925 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.61□□□□□ -2.51
PFDN1O60925 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC-0.61□□□□□ -2.51
PFDN1O60925 MIR499B-201ENST00000636498 73 ntBASIC-0.61□□□□□ -2.51
PFDN1O60925 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
PFDN1O60925 MIR193B-201ENST00000384907 83 ntBASIC-0.62□□□□□ -2.51
PFDN1O60925 MIR760-201ENST00000390220 80 ntBASIC-0.62□□□□□ -2.51
PFDN1O60925 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
PFDN1O60925 AL049545.1-201ENST00000401856 572 ntBASIC-0.62□□□□□ -2.51
PFDN1O60925 SSR1P2-201ENST00000415208 787 ntBASIC-0.62□□□□□ -2.51
PFDN1O60925 BTF3P11-201ENST00000426582 477 ntBASIC-0.62□□□□□ -2.51
PFDN1O60925 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.62□□□□□ -2.51
PFDN1O60925 RNU7-167P-201ENST00000459160 62 ntBASIC-0.62□□□□□ -2.51
PFDN1O60925 RNA5SP20-201ENST00000515976 84 ntBASIC-0.62□□□□□ -2.51
PFDN1O60925 RNA5SP268-201ENST00000516828 124 ntBASIC-0.62□□□□□ -2.51
PFDN1O60925 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC-0.62□□□□□ -2.51
PFDN1O60925 MTND4P33-201ENST00000556706 766 ntBASIC-0.62□□□□□ -2.51
PFDN1O60925 RN7SL793P-201ENST00000583259 296 ntBASIC-0.62□□□□□ -2.51
PFDN1O60925 AC018714.1-201ENST00000605028 208 ntBASIC-0.62□□□□□ -2.51
PFDN1O60925 RNU4-5P-201ENST00000607255 135 ntBASIC-0.62□□□□□ -2.51
PFDN1O60925 AL357075.2-201ENST00000614906 189 ntBASIC-0.62□□□□□ -2.51
PFDN1O60925 AL138960.2-201ENST00000625145 535 ntBASIC-0.62□□□□□ -2.51
PFDN1O60925 AC013437.2-201ENST00000639587 677 ntBASIC-0.62□□□□□ -2.51
PFDN1O60925 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.63□□□□□ -2.51
PFDN1O60925 RNU6-873P-201ENST00000363833 107 ntBASIC-0.63□□□□□ -2.51
PFDN1O60925 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.63□□□□□ -2.51
PFDN1O60925 RNU6-501P-201ENST00000364072 100 ntBASIC-0.63□□□□□ -2.51
PFDN1O60925 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.63□□□□□ -2.51
PFDN1O60925 RNU6-83P-201ENST00000384568 112 ntBASIC-0.63□□□□□ -2.51
PFDN1O60925 MIR938-201ENST00000401216 83 ntBASIC-0.63□□□□□ -2.51
PFDN1O60925 RNU2-54P-201ENST00000410299 190 ntBASIC-0.63□□□□□ -2.51
PFDN1O60925 MTND4P32-201ENST00000437189 1237 ntBASIC-0.63□□□□□ -2.51
PFDN1O60925 SNORD4A-201ENST00000459174 72 ntBASIC-0.63□□□□□ -2.51
PFDN1O60925 RNU7-159P-201ENST00000459284 62 ntBASIC-0.63□□□□□ -2.51
PFDN1O60925 Vault.3-201ENST00000516676 95 ntBASIC-0.63□□□□□ -2.51
PFDN1O60925 MIR548AR-201ENST00000582191 57 ntBASIC-0.63□□□□□ -2.51
PFDN1O60925 MIR4743-201ENST00000584576 69 ntBASIC-0.63□□□□□ -2.51
PFDN1O60925 MIR7107-201ENST00000611489 80 ntBASIC-0.63□□□□□ -2.51
PFDN1O60925 AL591926.4-201ENST00000616895 298 ntBASIC-0.63□□□□□ -2.51
PFDN1O60925 MIR377-201ENST00000362145 69 ntBASIC-0.64□□□□□ -2.51
PFDN1O60925 MIR15B-201ENST00000385045 98 ntBASIC-0.64□□□□□ -2.51
PFDN1O60925 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.64□□□□□ -2.51
PFDN1O60925 RNU7-102P-201ENST00000458948 62 ntBASIC-0.64□□□□□ -2.51
PFDN1O60925 RNU7-138P-201ENST00000459479 64 ntBASIC-0.64□□□□□ -2.51
PFDN1O60925 RPL17P19-201ENST00000489069 552 ntBASIC-0.64□□□□□ -2.51
PFDN1O60925 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-0.64□□□□□ -2.51
PFDN1O60925 RNA5SP54-201ENST00000516951 92 ntBASIC-0.64□□□□□ -2.51
PFDN1O60925 AL358944.1-201ENST00000528537 144 ntBASIC-0.64□□□□□ -2.51
PFDN1O60925 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC-0.64□□□□□ -2.51
PFDN1O60925 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-0.64□□□□□ -2.51
PFDN1O60925 AF250324.2-201ENST00000608299 610 ntBASIC-0.64□□□□□ -2.51
PFDN1O60925 MIR8087-201ENST00000612745 78 ntBASIC-0.64□□□□□ -2.51
PFDN1O60925 uc_338.6-201ENST00000613544 171 ntBASIC-0.64□□□□□ -2.51
PFDN1O60925 Y_RNA.148-201ENST00000363557 117 ntBASIC-0.65□□□□□ -2.51
PFDN1O60925 RNU6-636P-201ENST00000384598 107 ntBASIC-0.65□□□□□ -2.51
PFDN1O60925 SNORA26-201ENST00000391286 122 ntBASIC-0.65□□□□□ -2.51
PFDN1O60925 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.65□□□□□ -2.51
PFDN1O60925 GPR143P-201ENST00000434155 205 ntBASIC-0.65□□□□□ -2.51
PFDN1O60925 USP9YP12-201ENST00000450481 570 ntBASIC-0.65□□□□□ -2.51
PFDN1O60925 AC104692.1-201ENST00000472406 90 ntBASIC-0.65□□□□□ -2.51
PFDN1O60925 AC104576.1-201ENST00000524225 88 ntBASIC-0.65□□□□□ -2.51
PFDN1O60925 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.65□□□□□ -2.51
PFDN1O60925 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.65□□□□□ -2.51
PFDN1O60925 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.66□□□□□ -2.51
PFDN1O60925 RNU5E-5P-201ENST00000365379 116 ntBASIC-0.66□□□□□ -2.52
PFDN1O60925 SNORD114-12-201ENST00000365400 75 ntBASIC-0.66□□□□□ -2.52
PFDN1O60925 RNY1P4-201ENST00000384595 115 ntBASIC-0.66□□□□□ -2.52
PFDN1O60925 MIR106A-201ENST00000384870 81 ntBASIC-0.66□□□□□ -2.52
PFDN1O60925 RNU6-195P-201ENST00000411352 109 ntBASIC-0.66□□□□□ -2.52
PFDN1O60925 AL358176.2-201ENST00000425769 204 ntBASIC-0.66□□□□□ -2.52
PFDN1O60925 AC079354.2-201ENST00000453523 154 ntBASIC-0.66□□□□□ -2.52
PFDN1O60925 U8.21-201ENST00000459536 136 ntBASIC-0.66□□□□□ -2.52
PFDN1O60925 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.66□□□□□ -2.52
PFDN1O60925 AC022878.1-201ENST00000530684 149 ntBASIC-0.66□□□□□ -2.52
PFDN1O60925 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.66□□□□□ -2.52
PFDN1O60925 AC092447.9-201ENST00000603395 144 ntBASIC-0.66□□□□□ -2.52
PFDN1O60925 AL670379.3-201ENST00000605040 251 ntBASIC-0.66□□□□□ -2.52
PFDN1O60925 Z84480.1-201ENST00000605131 311 ntBASIC-0.66□□□□□ -2.52
PFDN1O60925 RNA5SP432-201ENST00000362480 116 ntBASIC-0.67□□□□□ -2.52
PFDN1O60925 U8.5-201ENST00000364528 136 ntBASIC-0.67□□□□□ -2.52
PFDN1O60925 RNA5SP117-201ENST00000365294 118 ntBASIC-0.67□□□□□ -2.52
PFDN1O60925 RNU6-117P-201ENST00000365415 107 ntBASIC-0.67□□□□□ -2.52
PFDN1O60925 RNU6-1000P-201ENST00000391066 106 ntBASIC-0.67□□□□□ -2.52
PFDN1O60925 MTCO2P33-201ENST00000402100 465 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 161.8 ms