Protein–RNA interactions for Protein: O60500

NPHS1, Nephrin, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHS1O60500 RNU6-376P-201ENST00000384731 106 ntBASIC2.89□□□□□ -1.95
NPHS1O60500 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC2.89□□□□□ -1.95
NPHS1O60500 AL357134.1-201ENST00000445848 426 ntBASIC2.89□□□□□ -1.95
NPHS1O60500 AC091153.1-201ENST00000466297 402 ntBASIC2.89□□□□□ -1.95
NPHS1O60500 MIR3117-201ENST00000584034 78 ntBASIC2.89□□□□□ -1.95
NPHS1O60500 AL355297.2-201ENST00000604792 129 ntBASIC2.89□□□□□ -1.95
NPHS1O60500 MIR6075-201ENST00000620782 95 ntBASIC2.89□□□□□ -1.95
NPHS1O60500 CENPCP1-201ENST00000533085 2578 ntBASIC2.89□□□□□ -1.95
NPHS1O60500 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.88□□□□□ -1.95
NPHS1O60500 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.88□□□□□ -1.95
NPHS1O60500 RNU1-22P-201ENST00000363334 158 ntBASIC2.88□□□□□ -1.95
NPHS1O60500 RNU4-41P-201ENST00000364426 143 ntBASIC2.88□□□□□ -1.95
NPHS1O60500 MIR7-3-201ENST00000384898 110 ntBASIC2.88□□□□□ -1.95
NPHS1O60500 AL590004.2-201ENST00000404787 371 ntBASIC2.88□□□□□ -1.95
NPHS1O60500 RNU2-63P-201ENST00000410792 194 ntBASIC2.88□□□□□ -1.95
NPHS1O60500 Y_RNA.622-201ENST00000411091 108 ntBASIC2.88□□□□□ -1.95
NPHS1O60500 AC006028.1-201ENST00000438379 402 ntBASIC2.88□□□□□ -1.95
NPHS1O60500 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.88□□□□□ -1.95
NPHS1O60500 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.88□□□□□ -1.95
NPHS1O60500 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.88□□□□□ -1.95
NPHS1O60500 MIR4438-201ENST00000585271 93 ntBASIC2.88□□□□□ -1.95
NPHS1O60500 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
NPHS1O60500 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
NPHS1O60500 AC010332.2-201ENST00000613083 1904 ntBASIC2.87□□□□□ -1.95
NPHS1O60500 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.87□□□□□ -1.95
NPHS1O60500 RNU6-674P-201ENST00000363831 107 ntBASIC2.87□□□□□ -1.95
NPHS1O60500 SNORD56.5-201ENST00000364281 72 ntBASIC2.87□□□□□ -1.95
NPHS1O60500 RNY3P5-201ENST00000384127 102 ntBASIC2.87□□□□□ -1.95
NPHS1O60500 SNORA20-201ENST00000384662 132 ntBASIC2.87□□□□□ -1.95
NPHS1O60500 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.87□□□□□ -1.95
NPHS1O60500 AC010154.1-201ENST00000425857 269 ntBASIC2.87□□□□□ -1.95
NPHS1O60500 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.87□□□□□ -1.95
NPHS1O60500 AP001486.1-201ENST00000463339 476 ntBASIC2.87□□□□□ -1.95
NPHS1O60500 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
NPHS1O60500 AC097462.1-201ENST00000514125 324 ntBASIC2.87□□□□□ -1.95
NPHS1O60500 SNORA4.4-201ENST00000515921 135 ntBASIC2.87□□□□□ -1.95
NPHS1O60500 RNA5SP76-201ENST00000516277 87 ntBASIC2.87□□□□□ -1.95
NPHS1O60500 RNU6-856P-201ENST00000516959 98 ntBASIC2.87□□□□□ -1.95
NPHS1O60500 AL031274.2-201ENST00000599419 203 ntBASIC2.87□□□□□ -1.95
NPHS1O60500 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
NPHS1O60500 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.86□□□□□ -1.95
NPHS1O60500 RNU6-199P-201ENST00000362954 107 ntBASIC2.86□□□□□ -1.95
NPHS1O60500 RNU6-461P-201ENST00000364195 107 ntBASIC2.86□□□□□ -1.95
NPHS1O60500 SNORA54-201ENST00000384281 123 ntBASIC2.86□□□□□ -1.95
NPHS1O60500 RNU6-22P-201ENST00000384355 107 ntBASIC2.86□□□□□ -1.95
NPHS1O60500 MIR627-201ENST00000384979 97 ntBASIC2.86□□□□□ -1.95
NPHS1O60500 Y_RNA.587-201ENST00000391210 103 ntBASIC2.86□□□□□ -1.95
NPHS1O60500 MIR513C-201ENST00000401352 84 ntBASIC2.86□□□□□ -1.95
NPHS1O60500 RN7SKP101-201ENST00000411376 320 ntBASIC2.86□□□□□ -1.95
NPHS1O60500 RPL30P13-201ENST00000418873 348 ntBASIC2.86□□□□□ -1.95
NPHS1O60500 AC060773.1-201ENST00000421698 310 ntBASIC2.86□□□□□ -1.95
NPHS1O60500 SNRPGP8-201ENST00000454064 226 ntBASIC2.86□□□□□ -1.95
NPHS1O60500 AC018868.1-201ENST00000491307 315 ntBASIC2.86□□□□□ -1.95
NPHS1O60500 RNU7-172P-201ENST00000517125 64 ntBASIC2.86□□□□□ -1.95
NPHS1O60500 MIR5680-201ENST00000577577 84 ntBASIC2.86□□□□□ -1.95
NPHS1O60500 MIR4429-201ENST00000580105 73 ntBASIC2.86□□□□□ -1.95
NPHS1O60500 AL929325.1-201ENST00000603096 117 ntBASIC2.86□□□□□ -1.95
NPHS1O60500 U2.20-201ENST00000613956 192 ntBASIC2.86□□□□□ -1.95
NPHS1O60500 AC091953.5-201ENST00000622919 233 ntBASIC2.86□□□□□ -1.95
NPHS1O60500 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
NPHS1O60500 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
NPHS1O60500 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.86□□□□□ -1.95
NPHS1O60500 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.86□□□□□ -1.95
NPHS1O60500 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
NPHS1O60500 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NPHS1O60500 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.85□□□□□ -1.95
NPHS1O60500 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.85□□□□□ -1.95
NPHS1O60500 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
NPHS1O60500 SNORA71.3-201ENST00000362582 128 ntBASIC2.85□□□□□ -1.95
NPHS1O60500 SNORD45.3-201ENST00000363836 72 ntBASIC2.85□□□□□ -1.95
NPHS1O60500 RNA5SP125-201ENST00000364843 120 ntBASIC2.85□□□□□ -1.95
NPHS1O60500 SNORA72-201ENST00000384339 132 ntBASIC2.85□□□□□ -1.95
NPHS1O60500 RNU6-768P-201ENST00000384683 107 ntBASIC2.85□□□□□ -1.95
NPHS1O60500 MIR592-201ENST00000384959 97 ntBASIC2.85□□□□□ -1.95
NPHS1O60500 SNORD37.2-201ENST00000391075 66 ntBASIC2.85□□□□□ -1.95
NPHS1O60500 RNA5SP496-201ENST00000391240 109 ntBASIC2.85□□□□□ -1.95
NPHS1O60500 MIR1253-201ENST00000408273 105 ntBASIC2.85□□□□□ -1.95
NPHS1O60500 RNU4-43P-201ENST00000410628 137 ntBASIC2.85□□□□□ -1.95
NPHS1O60500 AC005326.1-201ENST00000429197 123 ntBASIC2.85□□□□□ -1.95
NPHS1O60500 RPS4XP11-201ENST00000446897 772 ntBASIC2.85□□□□□ -1.95
NPHS1O60500 RNU6-667P-201ENST00000517186 102 ntBASIC2.85□□□□□ -1.95
NPHS1O60500 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.85□□□□□ -1.95
NPHS1O60500 AC112693.2-201ENST00000556538 232 ntBASIC2.85□□□□□ -1.95
NPHS1O60500 AC074050.1-201ENST00000563247 211 ntBASIC2.85□□□□□ -1.95
NPHS1O60500 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.85□□□□□ -1.95
NPHS1O60500 LARP7P3-201ENST00000579888 337 ntBASIC2.85□□□□□ -1.95
NPHS1O60500 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
NPHS1O60500 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NPHS1O60500 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.85□□□□□ -1.95
NPHS1O60500 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.84□□□□□ -1.95
NPHS1O60500 SNORA63.1-201ENST00000362493 131 ntBASIC2.84□□□□□ -1.95
NPHS1O60500 RNA5SP72-201ENST00000364442 117 ntBASIC2.84□□□□□ -1.95
NPHS1O60500 SNORA9.2-201ENST00000365361 133 ntBASIC2.84□□□□□ -1.95
NPHS1O60500 Y_RNA.521-201ENST00000384560 114 ntBASIC2.84□□□□□ -1.95
NPHS1O60500 RNU6-417P-201ENST00000384712 107 ntBASIC2.84□□□□□ -1.95
NPHS1O60500 MIR512-1-201ENST00000384913 84 ntBASIC2.84□□□□□ -1.95
NPHS1O60500 MIR561-201ENST00000385216 97 ntBASIC2.84□□□□□ -1.95
NPHS1O60500 SNORA40-201ENST00000388090 126 ntBASIC2.84□□□□□ -1.95
NPHS1O60500 RNU2-51P-201ENST00000410708 197 ntBASIC2.84□□□□□ -1.95
NPHS1O60500 AC003685.2-201ENST00000422795 395 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 176.3 ms