Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
TO15178 Y_RNA.138-201ENST00000363462 102 ntBASIC1.74□□□□□ -2.13
TO15178 RNU6-112P-201ENST00000363599 104 ntBASIC1.74□□□□□ -2.13
TO15178 RNU6-454P-201ENST00000364292 107 ntBASIC1.74□□□□□ -2.13
TO15178 Y_RNA.230-201ENST00000364348 109 ntBASIC1.74□□□□□ -2.13
TO15178 RNU6-20P-201ENST00000384106 107 ntBASIC1.74□□□□□ -2.13
TO15178 MIR520A-201ENST00000384862 85 ntBASIC1.74□□□□□ -2.13
TO15178 RNA5SP467-201ENST00000391274 118 ntBASIC1.74□□□□□ -2.13
TO15178 AC245047.4-201ENST00000433189 144 ntBASIC1.74□□□□□ -2.13
TO15178 AL121890.1-201ENST00000435457 205 ntBASIC1.74□□□□□ -2.13
TO15178 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.74□□□□□ -2.13
TO15178 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.74□□□□□ -2.13
TO15178 AC040926.1-201ENST00000530195 238 ntBASIC1.74□□□□□ -2.13
TO15178 MIR3198-2-201ENST00000577868 80 ntBASIC1.74□□□□□ -2.13
TO15178 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.74□□□□□ -2.13
TO15178 AC006380.1-201ENST00000603598 186 ntBASIC1.74□□□□□ -2.13
TO15178 SNRPGP19-201ENST00000603826 189 ntBASIC1.74□□□□□ -2.13
TO15178 U6.73-201ENST00000619194 103 ntBASIC1.74□□□□□ -2.13
TO15178 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.74□□□□□ -2.13
TO15178 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
TO15178 Y_RNA.148-201ENST00000363557 117 ntBASIC1.73□□□□□ -2.13
TO15178 RNU6-271P-201ENST00000363858 105 ntBASIC1.73□□□□□ -2.13
TO15178 SNORA20B-201ENST00000384220 132 ntBASIC1.73□□□□□ -2.13
TO15178 Y_RNA.458-201ENST00000384240 102 ntBASIC1.73□□□□□ -2.13
TO15178 AL355796.1-201ENST00000406706 323 ntBASIC1.73□□□□□ -2.13
TO15178 MIR1261-201ENST00000408659 82 ntBASIC1.73□□□□□ -2.13
TO15178 RNU2-7P-201ENST00000410794 178 ntBASIC1.73□□□□□ -2.13
TO15178 AL354751.2-201ENST00000415471 210 ntBASIC1.73□□□□□ -2.13
TO15178 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.73□□□□□ -2.13
TO15178 U8.20-201ENST00000459445 131 ntBASIC1.73□□□□□ -2.13
TO15178 RPS27P22-201ENST00000478056 241 ntBASIC1.73□□□□□ -2.13
TO15178 AL163540.1-201ENST00000485382 386 ntBASIC1.73□□□□□ -2.13
TO15178 AC010409.1-201ENST00000487382 476 ntBASIC1.73□□□□□ -2.13
TO15178 AC027419.1-201ENST00000522976 328 ntBASIC1.73□□□□□ -2.13
TO15178 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.73□□□□□ -2.13
TO15178 AC103810.8-201ENST00000607347 118 ntBASIC1.73□□□□□ -2.13
TO15178 U6.115-201ENST00000636045 103 ntBASIC1.73□□□□□ -2.13
TO15178 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
TO15178 Y_RNA.243-201ENST00000364481 109 ntBASIC1.72□□□□□ -2.13
TO15178 RNU4-76P-201ENST00000364509 141 ntBASIC1.72□□□□□ -2.13
TO15178 AC117470.1-201ENST00000381974 330 ntBASIC1.72□□□□□ -2.13
TO15178 Y_RNA.439-201ENST00000384119 94 ntBASIC1.72□□□□□ -2.13
TO15178 U8.13-201ENST00000390842 128 ntBASIC1.72□□□□□ -2.13
TO15178 MRPL42P3-201ENST00000401492 326 ntBASIC1.72□□□□□ -2.13
TO15178 MTND1P14-201ENST00000427400 950 ntBASIC1.72□□□□□ -2.13
TO15178 MRPS10P1-201ENST00000448483 130 ntBASIC1.72□□□□□ -2.13
TO15178 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.72□□□□□ -2.13
TO15178 Y_RNA.711-201ENST00000516993 102 ntBASIC1.72□□□□□ -2.13
TO15178 Y_RNA.721-201ENST00000517207 102 ntBASIC1.72□□□□□ -2.13
TO15178 AC110588.1-201ENST00000559699 137 ntBASIC1.72□□□□□ -2.13
TO15178 MIR4285-201ENST00000581001 85 ntBASIC1.72□□□□□ -2.13
TO15178 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC1.72□□□□□ -2.13
TO15178 MIR3171-201ENST00000584270 74 ntBASIC1.72□□□□□ -2.13
TO15178 MIR4438-201ENST00000585271 93 ntBASIC1.72□□□□□ -2.13
TO15178 AC044792.1-201ENST00000593294 196 ntBASIC1.72□□□□□ -2.13
TO15178 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
TO15178 AL356292.1-201ENST00000283110 373 ntBASIC1.71□□□□□ -2.14
TO15178 SNORA33-201ENST00000363664 130 ntBASIC1.71□□□□□ -2.14
TO15178 Y_RNA.202-201ENST00000364083 110 ntBASIC1.71□□□□□ -2.14
TO15178 SNORA63D-201ENST00000364359 132 ntBASIC1.71□□□□□ -2.14
TO15178 SNORA22B-201ENST00000383876 138 ntBASIC1.71□□□□□ -2.14
TO15178 Y_RNA.471-201ENST00000384312 102 ntBASIC1.71□□□□□ -2.14
TO15178 RNU6-296P-201ENST00000384608 107 ntBASIC1.71□□□□□ -2.14
TO15178 RNU11-5P-201ENST00000391216 129 ntBASIC1.71□□□□□ -2.14
TO15178 MIR934-201ENST00000401241 83 ntBASIC1.71□□□□□ -2.14
TO15178 RNU2-20P-201ENST00000410425 191 ntBASIC1.71□□□□□ -2.14
TO15178 RNU6-1186P-201ENST00000410429 97 ntBASIC1.71□□□□□ -2.14
TO15178 AL390729.2-201ENST00000416137 156 ntBASIC1.71□□□□□ -2.14
TO15178 AC010154.1-201ENST00000425857 269 ntBASIC1.71□□□□□ -2.14
TO15178 RNU7-99P-201ENST00000516271 62 ntBASIC1.71□□□□□ -2.14
TO15178 RNA5SP481-201ENST00000516814 122 ntBASIC1.71□□□□□ -2.14
TO15178 SNORA31.17-201ENST00000516953 127 ntBASIC1.71□□□□□ -2.14
TO15178 RNU2-12P-201ENST00000517216 168 ntBASIC1.71□□□□□ -2.14
TO15178 AC022616.4-201ENST00000522985 181 ntBASIC1.71□□□□□ -2.14
TO15178 CBX3P4-201ENST00000538909 354 ntBASIC1.71□□□□□ -2.14
TO15178 AC023157.2-201ENST00000540596 141 ntBASIC1.71□□□□□ -2.14
TO15178 AC020661.2-201ENST00000560114 134 ntBASIC1.71□□□□□ -2.14
TO15178 AC005828.6-201ENST00000606610 232 ntBASIC1.71□□□□□ -2.14
TO15178 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.71□□□□□ -2.14
TO15178 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.71□□□□□ -2.14
TO15178 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
TO15178 SNORD114-7-201ENST00000362520 77 ntBASIC1.7□□□□□ -2.14
TO15178 SNORA27.1-201ENST00000362604 124 ntBASIC1.7□□□□□ -2.14
TO15178 SNORA63.7-201ENST00000365579 123 ntBASIC1.7□□□□□ -2.14
TO15178 Y_RNA.462-201ENST00000384268 102 ntBASIC1.7□□□□□ -2.14
TO15178 Y_RNA.551-201ENST00000384661 102 ntBASIC1.7□□□□□ -2.14
TO15178 MIR873-201ENST00000401120 77 ntBASIC1.7□□□□□ -2.14
TO15178 RNU2-54P-201ENST00000410299 190 ntBASIC1.7□□□□□ -2.14
TO15178 RNU6-101P-201ENST00000410323 104 ntBASIC1.7□□□□□ -2.14
TO15178 RNU5A-5P-201ENST00000411054 116 ntBASIC1.7□□□□□ -2.14
TO15178 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.7□□□□□ -2.14
TO15178 AC005534.2-201ENST00000431047 433 ntBASIC1.7□□□□□ -2.14
TO15178 snoU13.26-201ENST00000459452 105 ntBASIC1.7□□□□□ -2.14
TO15178 AL163195.1-201ENST00000496941 348 ntBASIC1.7□□□□□ -2.14
TO15178 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC1.7□□□□□ -2.14
TO15178 RNA5SP20-201ENST00000515976 84 ntBASIC1.7□□□□□ -2.14
TO15178 AC055872.1-201ENST00000570978 278 ntBASIC1.7□□□□□ -2.14
TO15178 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC1.7□□□□□ -2.14
TO15178 AL356055.1-201ENST00000602528 446 ntBASIC1.7□□□□□ -2.14
TO15178 AC124312.5-201ENST00000604451 268 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 232.5 ms