Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 MIR613-201ENST00000385248 95 ntBASIC-0.5□□□□□ -2.49
TRAV13-1A0A0B4J241 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.5□□□□□ -2.49
TRAV13-1A0A0B4J241 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.5□□□□□ -2.49
TRAV13-1A0A0B4J241 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.5□□□□□ -2.49
TRAV13-1A0A0B4J241 RPS29P15-201ENST00000458329 171 ntBASIC-0.5□□□□□ -2.49
TRAV13-1A0A0B4J241 HMGN1P10-201ENST00000474557 553 ntBASIC-0.5□□□□□ -2.49
TRAV13-1A0A0B4J241 MTND1P35-201ENST00000526739 508 ntBASIC-0.5□□□□□ -2.49
TRAV13-1A0A0B4J241 PCMTD1P2-201ENST00000565017 355 ntBASIC-0.5□□□□□ -2.49
TRAV13-1A0A0B4J241 AL355375.2-201ENST00000574825 175 ntBASIC-0.5□□□□□ -2.49
TRAV13-1A0A0B4J241 MIR4703-201ENST00000577728 79 ntBASIC-0.5□□□□□ -2.49
TRAV13-1A0A0B4J241 AC005730.3-201ENST00000583067 366 ntBASIC-0.5□□□□□ -2.49
TRAV13-1A0A0B4J241 AC091304.9-201ENST00000612091 226 ntBASIC-0.5□□□□□ -2.49
TRAV13-1A0A0B4J241 AC013437.2-201ENST00000639587 677 ntBASIC-0.5□□□□□ -2.49
TRAV13-1A0A0B4J241 SNORA36.1-201ENST00000363424 132 ntBASIC-0.51□□□□□ -2.49
TRAV13-1A0A0B4J241 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.51□□□□□ -2.49
TRAV13-1A0A0B4J241 RNU6-747P-201ENST00000390928 104 ntBASIC-0.51□□□□□ -2.49
TRAV13-1A0A0B4J241 RNU6-241P-201ENST00000391148 104 ntBASIC-0.51□□□□□ -2.49
TRAV13-1A0A0B4J241 MIR548H2-201ENST00000408874 88 ntBASIC-0.51□□□□□ -2.49
TRAV13-1A0A0B4J241 RNU2-72P-201ENST00000411175 163 ntBASIC-0.51□□□□□ -2.49
TRAV13-1A0A0B4J241 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-0.51□□□□□ -2.49
TRAV13-1A0A0B4J241 MTND1P26-201ENST00000440488 538 ntBASIC-0.51□□□□□ -2.49
TRAV13-1A0A0B4J241 RNU7-167P-201ENST00000459160 62 ntBASIC-0.51□□□□□ -2.49
TRAV13-1A0A0B4J241 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.51□□□□□ -2.49
TRAV13-1A0A0B4J241 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.51□□□□□ -2.49
TRAV13-1A0A0B4J241 AC090897.1-201ENST00000580909 226 ntBASIC-0.51□□□□□ -2.49
TRAV13-1A0A0B4J241 AC020891.4-201ENST00000605745 93 ntBASIC-0.51□□□□□ -2.49
TRAV13-1A0A0B4J241 RNU4-5P-201ENST00000607255 135 ntBASIC-0.51□□□□□ -2.49
TRAV13-1A0A0B4J241 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.51□□□□□ -2.49
TRAV13-1A0A0B4J241 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC-0.51□□□□□ -2.49
TRAV13-1A0A0B4J241 SNORD115-8-201ENST00000363856 82 ntBASIC-0.52□□□□□ -2.49
TRAV13-1A0A0B4J241 SNORD115-38-201ENST00000365037 82 ntBASIC-0.52□□□□□ -2.49
TRAV13-1A0A0B4J241 Y_RNA.370-201ENST00000365589 108 ntBASIC-0.52□□□□□ -2.49
TRAV13-1A0A0B4J241 MT-TN-201ENST00000387400 73 ntBASIC-0.52□□□□□ -2.49
TRAV13-1A0A0B4J241 MIR892B-201ENST00000401279 77 ntBASIC-0.52□□□□□ -2.49
TRAV13-1A0A0B4J241 RNU6ATAC6P-201ENST00000408132 126 ntBASIC-0.52□□□□□ -2.49
TRAV13-1A0A0B4J241 PDCL2P1-201ENST00000419302 352 ntBASIC-0.52□□□□□ -2.49
TRAV13-1A0A0B4J241 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC-0.52□□□□□ -2.49
TRAV13-1A0A0B4J241 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.52□□□□□ -2.49
TRAV13-1A0A0B4J241 USP9YP25-201ENST00000457708 443 ntBASIC-0.52□□□□□ -2.49
TRAV13-1A0A0B4J241 SNORD4A-201ENST00000459174 72 ntBASIC-0.52□□□□□ -2.49
TRAV13-1A0A0B4J241 U8.21-201ENST00000459536 136 ntBASIC-0.52□□□□□ -2.49
TRAV13-1A0A0B4J241 RPL17P19-201ENST00000489069 552 ntBASIC-0.52□□□□□ -2.49
TRAV13-1A0A0B4J241 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.52□□□□□ -2.49
TRAV13-1A0A0B4J241 AC105417.1-201ENST00000514691 285 ntBASIC-0.52□□□□□ -2.49
TRAV13-1A0A0B4J241 RNU6-320P-201ENST00000516511 106 ntBASIC-0.52□□□□□ -2.49
TRAV13-1A0A0B4J241 MTND4P33-201ENST00000556706 766 ntBASIC-0.52□□□□□ -2.49
TRAV13-1A0A0B4J241 AC005176.2-201ENST00000596933 147 ntBASIC-0.52□□□□□ -2.49
TRAV13-1A0A0B4J241 AL133173.2-201ENST00000614270 90 ntBASIC-0.52□□□□□ -2.49
TRAV13-1A0A0B4J241 AC068137.4-201ENST00000638485 296 ntBASIC-0.52□□□□□ -2.49
TRAV13-1A0A0B4J241 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.52□□□□□ -2.49
TRAV13-1A0A0B4J241 SNORD68-201ENST00000363214 84 ntBASIC-0.53□□□□□ -2.49
TRAV13-1A0A0B4J241 SNORD45.3-201ENST00000363836 72 ntBASIC-0.53□□□□□ -2.49
TRAV13-1A0A0B4J241 RNU6-501P-201ENST00000364072 100 ntBASIC-0.53□□□□□ -2.49
TRAV13-1A0A0B4J241 U8.5-201ENST00000364528 136 ntBASIC-0.53□□□□□ -2.49
TRAV13-1A0A0B4J241 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC-0.53□□□□□ -2.49
TRAV13-1A0A0B4J241 RNU6-1242P-201ENST00000391052 103 ntBASIC-0.53□□□□□ -2.49
TRAV13-1A0A0B4J241 AL049545.1-201ENST00000401856 572 ntBASIC-0.53□□□□□ -2.49
TRAV13-1A0A0B4J241 RNA5SP127-201ENST00000411051 133 ntBASIC-0.53□□□□□ -2.49
TRAV13-1A0A0B4J241 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-0.53□□□□□ -2.49
TRAV13-1A0A0B4J241 AC005042.3-201ENST00000453230 174 ntBASIC-0.53□□□□□ -2.49
TRAV13-1A0A0B4J241 RNU7-138P-201ENST00000459479 64 ntBASIC-0.53□□□□□ -2.49
TRAV13-1A0A0B4J241 GMFBP1-201ENST00000467831 427 ntBASIC-0.53□□□□□ -2.49
TRAV13-1A0A0B4J241 AC091885.1-201ENST00000506658 268 ntBASIC-0.53□□□□□ -2.49
TRAV13-1A0A0B4J241 RNU7-129P-201ENST00000516128 62 ntBASIC-0.53□□□□□ -2.49
TRAV13-1A0A0B4J241 SNORA25.14-201ENST00000516481 132 ntBASIC-0.53□□□□□ -2.49
TRAV13-1A0A0B4J241 Vault.3-201ENST00000516676 95 ntBASIC-0.53□□□□□ -2.49
TRAV13-1A0A0B4J241 RNU6-63P-201ENST00000516690 95 ntBASIC-0.53□□□□□ -2.49
TRAV13-1A0A0B4J241 MTND1P8-201ENST00000571424 950 ntBASIC-0.53□□□□□ -2.49
TRAV13-1A0A0B4J241 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.54□□□□□ -2.5
TRAV13-1A0A0B4J241 RNU6-727P-201ENST00000363592 107 ntBASIC-0.54□□□□□ -2.5
TRAV13-1A0A0B4J241 SNORA20B-201ENST00000384220 132 ntBASIC-0.54□□□□□ -2.5
TRAV13-1A0A0B4J241 AC018865.2-201ENST00000423631 129 ntBASIC-0.54□□□□□ -2.5
TRAV13-1A0A0B4J241 AL365184.2-201ENST00000431139 435 ntBASIC-0.54□□□□□ -2.5
TRAV13-1A0A0B4J241 GPR143P-201ENST00000434155 205 ntBASIC-0.54□□□□□ -2.5
TRAV13-1A0A0B4J241 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.54□□□□□ -2.5
TRAV13-1A0A0B4J241 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.54□□□□□ -2.5
TRAV13-1A0A0B4J241 SUMO1P2-201ENST00000452524 304 ntBASIC-0.54□□□□□ -2.5
TRAV13-1A0A0B4J241 RNU7-159P-201ENST00000459284 62 ntBASIC-0.54□□□□□ -2.5
TRAV13-1A0A0B4J241 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC-0.54□□□□□ -2.5
TRAV13-1A0A0B4J241 AC010608.3-201ENST00000625048 527 ntBASIC-0.54□□□□□ -2.5
TRAV13-1A0A0B4J241 MTND4P12-201ENST00000498999 1377 ntBASIC-0.55□□□□□ -2.5
TRAV13-1A0A0B4J241 Y_RNA.184-201ENST00000363884 108 ntBASIC-0.55□□□□□ -2.5
TRAV13-1A0A0B4J241 MIR938-201ENST00000401216 83 ntBASIC-0.55□□□□□ -2.5
TRAV13-1A0A0B4J241 AL359672.1-201ENST00000442302 409 ntBASIC-0.55□□□□□ -2.5
TRAV13-1A0A0B4J241 AC069271.1-201ENST00000445577 156 ntBASIC-0.55□□□□□ -2.5
TRAV13-1A0A0B4J241 RPL23AP75-201ENST00000491601 451 ntBASIC-0.55□□□□□ -2.5
TRAV13-1A0A0B4J241 RNA5SP20-201ENST00000515976 84 ntBASIC-0.55□□□□□ -2.5
TRAV13-1A0A0B4J241 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.55□□□□□ -2.5
TRAV13-1A0A0B4J241 AC022878.1-201ENST00000530684 149 ntBASIC-0.55□□□□□ -2.5
TRAV13-1A0A0B4J241 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.55□□□□□ -2.5
TRAV13-1A0A0B4J241 MIR4762-201ENST00000585261 75 ntBASIC-0.55□□□□□ -2.5
TRAV13-1A0A0B4J241 AF250324.2-201ENST00000608299 610 ntBASIC-0.55□□□□□ -2.5
TRAV13-1A0A0B4J241 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.56□□□□□ -2.5
TRAV13-1A0A0B4J241 RNU6-1317P-201ENST00000364582 104 ntBASIC-0.56□□□□□ -2.5
TRAV13-1A0A0B4J241 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.56□□□□□ -2.5
TRAV13-1A0A0B4J241 RNU6-636P-201ENST00000384598 107 ntBASIC-0.56□□□□□ -2.5
TRAV13-1A0A0B4J241 RNU6-925P-201ENST00000384629 104 ntBASIC-0.56□□□□□ -2.5
TRAV13-1A0A0B4J241 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.56□□□□□ -2.5
TRAV13-1A0A0B4J241 AL390729.2-201ENST00000416137 156 ntBASIC-0.56□□□□□ -2.5
TRAV13-1A0A0B4J241 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.56□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms